EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000033176 (Gene tree)
Gene ID: 302670
Gene Symbol: Zrsr2
Alias: LOC302670|RGD1559763
Full Name: zinc finger (CCCH type)%2C RNA binding motif and serine/arginine rich 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 23608 bases
Position: chrX:32304757-32328364
Accession: 1559763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000049816	zf-CCCH	PF00642.24	4.5e-13	1	1
ENSRNOP00000049816	RRM_1	PF00076.22	0.0002	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000045300	-	2923	XM_006256887	ENSRNOP00000049816	541 (aa)	XP_001067753	D3ZHQ8

Gene Model

Click here to download ENSRNOG00000033176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000033176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000033176	Zrsr2	80	73.793	ENSRNOG00000009639	Zrsr1	93	74.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000033176	Zrsr2	79	78.923	ENSANAG00000036245	-	81	78.313	Aotus_nancymaae
ENSRNOG00000033176	Zrsr2	65	67.614	ENSCAFG00000025134	-	81	65.057	Canis_familiaris
ENSRNOG00000033176	Zrsr2	52	68.056	ENSGAFG00000008284	-	54	61.783	Gambusia_affinis
ENSRNOG00000033176	Zrsr2	80	90.345	MGP_CAROLIEiJ_G0033555	Zrsr2	78	91.084	Mus_caroli
ENSRNOG00000033176	Zrsr2	79	91.355	ENSMUSG00000031370	Zrsr2	87	88.323	Mus_musculus
ENSRNOG00000033176	Zrsr2	80	89.655	MGP_PahariEiJ_G0032094	Zrsr2	82	89.450	Mus_pahari
ENSRNOG00000033176	Zrsr2	81	89.016	MGP_SPRETEiJ_G0034725	Zrsr2	87	87.420	Mus_spretus
ENSRNOG00000033176	Zrsr2	78	90.544	ENSPEMG00000018871	-	95	90.488	Peromyscus_maniculatus_bairdii
ENSRNOG00000033176	Zrsr2	52	67.483	ENSSLDG00000009759	-	58	65.035	Seriola_lalandi_dorsalis
ENSRNOG00000033176	Zrsr2	52	80.342	ENSSARG00000000116	-	56	80.342	Sorex_araneus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000245	spliceosomal complex assembly	-	ISO	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0005689	U12-type spliceosomal complex	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0030628	pre-mRNA 3'-splice site binding	21873635.	IBA	Function
GO:0030628	pre-mRNA 3'-splice site binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0089701	U2AF	21873635.	IBA	Component