EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000033560 (Gene tree)
Gene ID: 310685
Gene Symbol: Polr3c
Alias: LOC310685
Full Name: RNA polymerase III subunit C
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 15877 bases
Position: chr2:198836285-198852161
Accession: 1311545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000028815	RNA_pol_Rpc82	PF05645.13	1.1e-41	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000028815	-	2365	XM_006232967	ENSRNOP00000028815	533 (aa)	XP_006233029	Q5XIL3

Gene Model

Click here to download ENSRNOG00000033560's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03020	RNA polymerase	KEGG
rno04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000033560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000033560	Polr3c	100	93.820	ENSG00000186141	POLR3C	100	93.820	Homo_sapiens
ENSRNOG00000033560	Polr3c	99	63.168	ENSAPOG00000008722	polr3c	99	63.168	Acanthochromis_polyacanthus
ENSRNOG00000033560	Polr3c	100	94.195	ENSAMEG00000017531	POLR3C	100	94.195	Ailuropoda_melanoleuca
ENSRNOG00000033560	Polr3c	99	64.835	ENSACIG00000008064	polr3c	99	63.919	Amphilophus_citrinellus
ENSRNOG00000033560	Polr3c	99	65.038	ENSAOCG00000011695	polr3c	99	65.038	Amphiprion_ocellaris
ENSRNOG00000033560	Polr3c	99	65.038	ENSAPEG00000004426	polr3c	99	65.038	Amphiprion_percula
ENSRNOG00000033560	Polr3c	99	64.207	ENSATEG00000023618	polr3c	92	64.564	Anabas_testudineus
ENSRNOG00000033560	Polr3c	99	93.809	ENSANAG00000036434	POLR3C	99	93.809	Aotus_nancymaae
ENSRNOG00000033560	Polr3c	99	63.024	ENSACLG00000019970	polr3c	99	63.187	Astatotilapia_calliptera
ENSRNOG00000033560	Polr3c	99	63.653	ENSAMXG00000008273	polr3c	99	63.451	Astyanax_mexicanus
ENSRNOG00000033560	Polr3c	99	93.246	ENSBTAG00000021637	POLR3C	100	93.246	Bos_taurus
ENSRNOG00000033560	Polr3c	99	93.809	ENSCJAG00000002314	POLR3C	99	93.809	Callithrix_jacchus
ENSRNOG00000033560	Polr3c	100	93.820	ENSCAFG00000011257	POLR3C	100	93.820	Canis_familiaris
ENSRNOG00000033560	Polr3c	95	93.504	ENSCAFG00020020066	POLR3C	99	93.504	Canis_lupus_dingo
ENSRNOG00000033560	Polr3c	100	93.820	ENSCHIG00000022431	POLR3C	100	93.820	Capra_hircus
ENSRNOG00000033560	Polr3c	100	94.569	ENSTSYG00000002292	POLR3C	100	94.569	Carlito_syrichta
ENSRNOG00000033560	Polr3c	95	72.978	ENSCAPG00000011559	POLR3C	100	72.978	Cavia_aperea
ENSRNOG00000033560	Polr3c	100	92.509	ENSCPOG00000004654	POLR3C	100	92.509	Cavia_porcellus
ENSRNOG00000033560	Polr3c	99	93.996	ENSCCAG00000027077	POLR3C	99	93.996	Cebus_capucinus
ENSRNOG00000033560	Polr3c	100	94.007	ENSCATG00000040166	POLR3C	100	94.007	Cercocebus_atys
ENSRNOG00000033560	Polr3c	89	93.173	ENSCLAG00000001652	POLR3C	100	67.598	Chinchilla_lanigera
ENSRNOG00000033560	Polr3c	100	94.382	ENSCSAG00000001762	POLR3C	100	94.382	Chlorocebus_sabaeus
ENSRNOG00000033560	Polr3c	99	92.120	ENSCHOG00000006911	POLR3C	99	92.120	Choloepus_hoffmanni
ENSRNOG00000033560	Polr3c	99	85.178	ENSCPBG00000007883	POLR3C	99	85.178	Chrysemys_picta_bellii
ENSRNOG00000033560	Polr3c	99	46.805	ENSCING00000007024	-	99	47.180	Ciona_intestinalis
ENSRNOG00000033560	Polr3c	99	47.664	ENSCSAVG00000008586	-	99	46.904	Ciona_savignyi
ENSRNOG00000033560	Polr3c	100	94.007	ENSCANG00000032538	POLR3C	100	94.007	Colobus_angolensis_palliatus
ENSRNOG00000033560	Polr3c	100	96.435	ENSCGRG00001005471	Polr3c	100	96.435	Cricetulus_griseus_chok1gshd
ENSRNOG00000033560	Polr3c	100	96.435	ENSCGRG00000016787	Polr3c	100	96.435	Cricetulus_griseus_crigri
ENSRNOG00000033560	Polr3c	99	64.207	ENSCSEG00000002425	polr3c	99	64.935	Cynoglossus_semilaevis
ENSRNOG00000033560	Polr3c	99	62.025	ENSCVAG00000022458	polr3c	99	62.226	Cyprinodon_variegatus
ENSRNOG00000033560	Polr3c	99	62.025	ENSCVAG00000009443	polr3c	99	62.226	Cyprinodon_variegatus
ENSRNOG00000033560	Polr3c	99	66.294	ENSDARG00000057562	polr3c	99	65.736	Danio_rerio
ENSRNOG00000033560	Polr3c	72	94.256	ENSDNOG00000012149	POLR3C	100	94.256	Dasypus_novemcinctus
ENSRNOG00000033560	Polr3c	99	93.797	ENSDORG00000013430	Polr3c	99	93.797	Dipodomys_ordii
ENSRNOG00000033560	Polr3c	97	33.905	FBgn0038057	CG12267	96	33.905	Drosophila_melanogaster
ENSRNOG00000033560	Polr3c	100	81.835	ENSETEG00000017696	POLR3C	100	81.835	Echinops_telfairi
ENSRNOG00000033560	Polr3c	100	94.007	ENSEASG00005007417	POLR3C	100	94.007	Equus_asinus_asinus
ENSRNOG00000033560	Polr3c	100	91.760	ENSECAG00000023713	POLR3C	100	91.760	Equus_caballus
ENSRNOG00000033560	Polr3c	99	88.910	ENSEEUG00000011124	POLR3C	99	88.910	Erinaceus_europaeus
ENSRNOG00000033560	Polr3c	99	66.421	ENSELUG00000013209	polr3c	99	66.236	Esox_lucius
ENSRNOG00000033560	Polr3c	100	94.195	ENSFCAG00000013360	POLR3C	100	94.195	Felis_catus
ENSRNOG00000033560	Polr3c	100	91.948	ENSFDAG00000021078	POLR3C	100	91.948	Fukomys_damarensis
ENSRNOG00000033560	Polr3c	99	63.370	ENSFHEG00000000872	polr3c	99	63.370	Fundulus_heteroclitus
ENSRNOG00000033560	Polr3c	99	61.974	ENSGMOG00000018937	polr3c	99	62.316	Gadus_morhua
ENSRNOG00000033560	Polr3c	86	77.560	ENSGALG00000052515	-	100	77.560	Gallus_gallus
ENSRNOG00000033560	Polr3c	99	62.094	ENSGAFG00000014721	polr3c	99	63.071	Gambusia_affinis
ENSRNOG00000033560	Polr3c	99	64.540	ENSGACG00000011829	polr3c	99	64.286	Gasterosteus_aculeatus
ENSRNOG00000033560	Polr3c	99	84.615	ENSGAGG00000010176	POLR3C	99	84.615	Gopherus_agassizii
ENSRNOG00000033560	Polr3c	100	93.446	ENSGGOG00000007279	POLR3C	100	93.446	Gorilla_gorilla
ENSRNOG00000033560	Polr3c	99	63.206	ENSHBUG00000003619	polr3c	99	63.370	Haplochromis_burtoni
ENSRNOG00000033560	Polr3c	100	91.760	ENSHGLG00000014978	POLR3C	100	91.760	Heterocephalus_glaber_female
ENSRNOG00000033560	Polr3c	100	91.760	ENSHGLG00100015620	POLR3C	100	91.760	Heterocephalus_glaber_male
ENSRNOG00000033560	Polr3c	99	64.804	ENSHCOG00000000823	polr3c	99	64.794	Hippocampus_comes
ENSRNOG00000033560	Polr3c	99	64.587	ENSIPUG00000008657	polr3c	99	65.498	Ictalurus_punctatus
ENSRNOG00000033560	Polr3c	100	94.382	ENSSTOG00000014601	POLR3C	100	94.382	Ictidomys_tridecemlineatus
ENSRNOG00000033560	Polr3c	100	93.058	ENSJJAG00000011447	Polr3c	100	93.058	Jaculus_jaculus
ENSRNOG00000033560	Polr3c	99	62.094	ENSKMAG00000001574	polr3c	99	63.303	Kryptolebias_marmoratus
ENSRNOG00000033560	Polr3c	99	63.670	ENSLBEG00000026567	polr3c	99	63.670	Labrus_bergylta
ENSRNOG00000033560	Polr3c	99	73.823	ENSLACG00000017216	POLR3C	99	73.546	Latimeria_chalumnae
ENSRNOG00000033560	Polr3c	99	58.889	ENSLOCG00000006400	polr3c	99	58.889	Lepisosteus_oculatus
ENSRNOG00000033560	Polr3c	99	94.184	ENSLAFG00000029485	POLR3C	100	94.184	Loxodonta_africana
ENSRNOG00000033560	Polr3c	100	94.195	ENSMFAG00000040338	POLR3C	100	94.195	Macaca_fascicularis
ENSRNOG00000033560	Polr3c	100	94.195	ENSMMUG00000016735	POLR3C	100	94.195	Macaca_mulatta
ENSRNOG00000033560	Polr3c	100	94.195	ENSMNEG00000040944	POLR3C	100	94.195	Macaca_nemestrina
ENSRNOG00000033560	Polr3c	100	94.195	ENSMLEG00000031091	POLR3C	100	94.195	Mandrillus_leucophaeus
ENSRNOG00000033560	Polr3c	99	64.587	ENSMAMG00000014770	polr3c	99	63.853	Mastacembelus_armatus
ENSRNOG00000033560	Polr3c	99	63.388	ENSMZEG00005015882	polr3c	99	63.187	Maylandia_zebra
ENSRNOG00000033560	Polr3c	100	95.872	ENSMAUG00000001454	-	100	95.872	Mesocricetus_auratus
ENSRNOG00000033560	Polr3c	77	79.177	ENSMAUG00000021521	-	98	79.177	Mesocricetus_auratus
ENSRNOG00000033560	Polr3c	100	93.820	ENSMICG00000034253	POLR3C	100	93.820	Microcebus_murinus
ENSRNOG00000033560	Polr3c	99	87.640	ENSMOCG00000000997	Polr3c	99	87.640	Microtus_ochrogaster
ENSRNOG00000033560	Polr3c	99	65.619	ENSMMOG00000003989	polr3c	99	65.065	Mola_mola
ENSRNOG00000033560	Polr3c	99	89.139	ENSMODG00000018745	-	74	89.139	Monodelphis_domestica
ENSRNOG00000033560	Polr3c	99	64.825	ENSMALG00000000156	polr3c	99	63.720	Monopterus_albus
ENSRNOG00000033560	Polr3c	100	97.373	MGP_CAROLIEiJ_G0025390	Polr3c	100	97.373	Mus_caroli
ENSRNOG00000033560	Polr3c	100	97.373	ENSMUSG00000028099	Polr3c	100	97.373	Mus_musculus
ENSRNOG00000033560	Polr3c	100	97.373	MGP_PahariEiJ_G0026835	Polr3c	100	97.373	Mus_pahari
ENSRNOG00000033560	Polr3c	100	96.811	MGP_SPRETEiJ_G0026337	Polr3c	100	96.811	Mus_spretus
ENSRNOG00000033560	Polr3c	100	93.633	ENSMPUG00000000656	POLR3C	100	93.633	Mustela_putorius_furo
ENSRNOG00000033560	Polr3c	100	90.485	ENSMLUG00000004060	POLR3C	100	90.485	Myotis_lucifugus
ENSRNOG00000033560	Polr3c	100	96.248	ENSNGAG00000013090	Polr3c	100	96.248	Nannospalax_galili
ENSRNOG00000033560	Polr3c	99	63.024	ENSNBRG00000003707	polr3c	99	63.553	Neolamprologus_brichardi
ENSRNOG00000033560	Polr3c	100	93.820	ENSNLEG00000005645	POLR3C	100	93.820	Nomascus_leucogenys
ENSRNOG00000033560	Polr3c	86	93.651	ENSMEUG00000012664	POLR3C	87	93.651	Notamacropus_eugenii
ENSRNOG00000033560	Polr3c	99	90.432	ENSOPRG00000004244	POLR3C	99	90.432	Ochotona_princeps
ENSRNOG00000033560	Polr3c	100	91.011	ENSODEG00000000304	POLR3C	100	91.011	Octodon_degus
ENSRNOG00000033560	Polr3c	99	63.752	ENSONIG00000006370	polr3c	99	63.553	Oreochromis_niloticus
ENSRNOG00000033560	Polr3c	67	60.000	ENSOANG00000000559	-	100	60.000	Ornithorhynchus_anatinus
ENSRNOG00000033560	Polr3c	99	93.809	ENSOCUG00000003050	POLR3C	99	93.809	Oryctolagus_cuniculus
ENSRNOG00000033560	Polr3c	99	63.168	ENSORLG00000010133	polr3c	99	62.799	Oryzias_latipes
ENSRNOG00000033560	Polr3c	99	62.774	ENSORLG00020009245	polr3c	99	62.936	Oryzias_latipes_hni
ENSRNOG00000033560	Polr3c	99	62.799	ENSORLG00015015223	polr3c	99	62.431	Oryzias_latipes_hsok
ENSRNOG00000033560	Polr3c	99	62.888	ENSOMEG00000008558	polr3c	99	62.847	Oryzias_melastigma
ENSRNOG00000033560	Polr3c	99	94.371	ENSOGAG00000000209	POLR3C	99	94.371	Otolemur_garnettii
ENSRNOG00000033560	Polr3c	100	93.820	ENSOARG00000020588	POLR3C	100	93.820	Ovis_aries
ENSRNOG00000033560	Polr3c	100	93.633	ENSPPAG00000025184	POLR3C	100	93.633	Pan_paniscus
ENSRNOG00000033560	Polr3c	100	94.007	ENSPPRG00000008809	POLR3C	100	94.007	Panthera_pardus
ENSRNOG00000033560	Polr3c	100	94.007	ENSPTIG00000009916	POLR3C	100	94.007	Panthera_tigris_altaica
ENSRNOG00000033560	Polr3c	100	93.820	ENSPTRG00000001208	POLR3C	100	93.820	Pan_troglodytes
ENSRNOG00000033560	Polr3c	100	93.820	ENSPANG00000019404	POLR3C	100	93.820	Papio_anubis
ENSRNOG00000033560	Polr3c	99	65.492	ENSPKIG00000014883	polr3c	99	65.492	Paramormyrops_kingsleyae
ENSRNOG00000033560	Polr3c	99	85.178	ENSPSIG00000004694	POLR3C	99	85.178	Pelodiscus_sinensis
ENSRNOG00000033560	Polr3c	99	63.993	ENSPMGG00000007761	polr3c	99	64.366	Periophthalmus_magnuspinnatus
ENSRNOG00000033560	Polr3c	99	96.241	ENSPEMG00000016322	Polr3c	99	96.241	Peromyscus_maniculatus_bairdii
ENSRNOG00000033560	Polr3c	99	62.454	ENSPMAG00000006993	polr3c	99	62.454	Petromyzon_marinus
ENSRNOG00000033560	Polr3c	99	88.390	ENSPCIG00000011954	POLR3C	99	88.390	Phascolarctos_cinereus
ENSRNOG00000033560	Polr3c	99	62.455	ENSPFOG00000014106	polr3c	99	63.254	Poecilia_formosa
ENSRNOG00000033560	Polr3c	99	65.226	ENSPLAG00000018932	polr3c	99	65.414	Poecilia_latipinna
ENSRNOG00000033560	Polr3c	92	77.011	ENSPMEG00000023273	polr3c	99	63.071	Poecilia_mexicana
ENSRNOG00000033560	Polr3c	99	63.720	ENSPREG00000017050	polr3c	99	63.889	Poecilia_reticulata
ENSRNOG00000033560	Polr3c	100	93.071	ENSPPYG00000000936	POLR3C	100	93.071	Pongo_abelii
ENSRNOG00000033560	Polr3c	91	92.562	ENSPCAG00000010501	POLR3C	99	92.562	Procavia_capensis
ENSRNOG00000033560	Polr3c	87	96.063	ENSPCOG00000024937	POLR3C	100	96.063	Propithecus_coquereli
ENSRNOG00000033560	Polr3c	99	92.871	ENSPVAG00000014483	POLR3C	100	92.871	Pteropus_vampyrus
ENSRNOG00000033560	Polr3c	99	63.206	ENSPNYG00000004504	polr3c	99	63.370	Pundamilia_nyererei
ENSRNOG00000033560	Polr3c	98	63.178	ENSPNAG00000018675	polr3c	99	63.401	Pygocentrus_nattereri
ENSRNOG00000033560	Polr3c	100	93.820	ENSRBIG00000035432	POLR3C	100	93.820	Rhinopithecus_bieti
ENSRNOG00000033560	Polr3c	100	93.820	ENSRROG00000039959	POLR3C	100	93.820	Rhinopithecus_roxellana
ENSRNOG00000033560	Polr3c	91	88.820	ENSSBOG00000028429	POLR3C	99	88.820	Saimiri_boliviensis_boliviensis
ENSRNOG00000033560	Polr3c	99	88.390	ENSSHAG00000018565	POLR3C	99	88.390	Sarcophilus_harrisii
ENSRNOG00000033560	Polr3c	99	67.477	ENSSFOG00015021863	polr3c	99	67.103	Scleropages_formosus
ENSRNOG00000033560	Polr3c	99	65.291	ENSSMAG00000016000	polr3c	99	65.291	Scophthalmus_maximus
ENSRNOG00000033560	Polr3c	99	65.607	ENSSDUG00000006590	polr3c	99	65.478	Seriola_dumerili
ENSRNOG00000033560	Polr3c	99	65.478	ENSSLDG00000015614	polr3c	99	65.478	Seriola_lalandi_dorsalis
ENSRNOG00000033560	Polr3c	63	94.940	ENSSARG00000014380	POLR3C	99	94.940	Sorex_araneus
ENSRNOG00000033560	Polr3c	99	84.053	ENSSPUG00000001834	POLR3C	99	84.053	Sphenodon_punctatus
ENSRNOG00000033560	Polr3c	99	64.286	ENSSPAG00000022520	polr3c	99	64.165	Stegastes_partitus
ENSRNOG00000033560	Polr3c	100	93.446	ENSSSCG00000006691	POLR3C	100	93.446	Sus_scrofa
ENSRNOG00000033560	Polr3c	99	71.455	ENSTGUG00000016941	POLR3C	99	71.161	Taeniopygia_guttata
ENSRNOG00000033560	Polr3c	99	63.216	ENSTRUG00000010726	polr3c	99	63.197	Takifugu_rubripes
ENSRNOG00000033560	Polr3c	99	64.815	ENSTNIG00000019501	polr3c	99	65.177	Tetraodon_nigroviridis
ENSRNOG00000033560	Polr3c	75	93.484	ENSTBEG00000015610	POLR3C	100	93.484	Tupaia_belangeri
ENSRNOG00000033560	Polr3c	72	95.918	ENSTTRG00000009216	POLR3C	72	95.918	Tursiops_truncatus
ENSRNOG00000033560	Polr3c	100	94.382	ENSUAMG00000021906	POLR3C	100	94.382	Ursus_americanus
ENSRNOG00000033560	Polr3c	100	94.382	ENSUMAG00000010180	POLR3C	100	94.382	Ursus_maritimus
ENSRNOG00000033560	Polr3c	100	93.633	ENSVVUG00000007421	POLR3C	100	93.633	Vulpes_vulpes
ENSRNOG00000033560	Polr3c	99	60.112	ENSXCOG00000019524	polr3c	99	60.112	Xiphophorus_couchianus
ENSRNOG00000033560	Polr3c	99	62.659	ENSXMAG00000016215	polr3c	99	63.004	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003674	molecular_function	-	ND	Function
GO:0003697	single-stranded DNA binding	-	ISO	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	-	ISO	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0032728	positive regulation of interferon-beta production	-	ISO	Process
GO:0032728	positive regulation of interferon-beta production	-	ISS	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045089	positive regulation of innate immune response	-	ISO	Process
GO:0045089	positive regulation of innate immune response	-	ISS	Process
GO:0051607	defense response to virus	-	IEA	Process