EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000034030 (Gene tree)
Gene ID: -
Gene Symbol: AC130162.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 104946 bases
Position: chr16:49293243-49398188
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070176	RVT_1	PF00078.27	3.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000049830	AC130162.1-201	3927	-	ENSRNOP00000070176	1309 (aa)	-	A0A0G2JX86

Gene Model

Click here to download ENSRNOG00000034030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000034030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000034030	AC130162.1	58	93.333	ENSRNOG00000057039	AC124874.1	70	93.333
ENSRNOG00000034030	AC130162.1	99	73.692	ENSRNOG00000060618	AABR07027267.1	99	73.692
ENSRNOG00000034030	AC130162.1	75	92.973	ENSRNOG00000059133	AABR07020537.1	60	92.973
ENSRNOG00000034030	AC130162.1	72	93.514	ENSRNOG00000058209	AABR07063893.1	59	93.514
ENSRNOG00000034030	AC130162.1	78	92.432	ENSRNOG00000059691	AABR07033318.1	61	92.432
ENSRNOG00000034030	AC130162.1	75	92.973	ENSRNOG00000056033	AC111632.2	60	92.973
ENSRNOG00000034030	AC130162.1	78	92.703	ENSRNOG00000054519	AABR07053179.1	61	92.703
ENSRNOG00000034030	AC130162.1	71	92.432	ENSRNOG00000056748	AC229945.1	58	92.432
ENSRNOG00000034030	AC130162.1	71	92.432	ENSRNOG00000047294	AABR07043115.1	58	92.432
ENSRNOG00000034030	AC130162.1	78	92.973	ENSRNOG00000049504	AABR07009221.1	61	92.973
ENSRNOG00000034030	AC130162.1	52	96.887	ENSRNOG00000005861	Hsd11b1	61	96.887
ENSRNOG00000034030	AC130162.1	99	75.133	ENSRNOG00000058277	AC080157.1	99	75.512
ENSRNOG00000034030	AC130162.1	72	92.432	ENSRNOG00000060742	AABR07029809.1	59	92.432
ENSRNOG00000034030	AC130162.1	99	77.297	ENSRNOG00000045583	AABR07002068.1	99	77.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000034030	AC130162.1	58	74.425	ENSBTAG00000049055	-	73	74.425	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.713	ENSBTAG00000050847	-	67	74.713	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.425	ENSBTAG00000052305	-	90	74.425	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.425	ENSBTAG00000050912	-	65	74.425	Bos_taurus
ENSRNOG00000034030	AC130162.1	55	77.143	ENSBTAG00000050735	-	72	77.143	Bos_taurus
ENSRNOG00000034030	AC130162.1	52	72.989	ENSBTAG00000053585	-	97	72.989	Bos_taurus
ENSRNOG00000034030	AC130162.1	53	74.713	ENSBTAG00000051208	-	64	74.713	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.713	ENSBTAG00000050965	-	67	74.713	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.425	ENSBTAG00000053316	-	67	74.425	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.138	ENSBTAG00000054175	-	76	74.138	Bos_taurus
ENSRNOG00000034030	AC130162.1	53	74.713	ENSBTAG00000053324	-	65	74.713	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.713	ENSBTAG00000050534	-	76	74.713	Bos_taurus
ENSRNOG00000034030	AC130162.1	55	78.947	ENSBTAG00000053171	-	66	78.947	Bos_taurus
ENSRNOG00000034030	AC130162.1	53	74.138	ENSBTAG00000054392	-	74	74.138	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.425	ENSBTAG00000051842	-	68	74.425	Bos_taurus
ENSRNOG00000034030	AC130162.1	58	74.713	ENSBTAG00000049649	-	67	74.713	Bos_taurus
ENSRNOG00000034030	AC130162.1	51	76.718	ENSCHIG00000010102	-	87	76.718	Capra_hircus
ENSRNOG00000034030	AC130162.1	58	73.851	ENSCHIG00000008419	-	84	73.851	Capra_hircus
ENSRNOG00000034030	AC130162.1	58	73.851	ENSCHIG00000008599	-	86	73.851	Capra_hircus
ENSRNOG00000034030	AC130162.1	60	75.798	ENSCGRG00000019173	-	62	75.798	Cricetulus_griseus_crigri
ENSRNOG00000034030	AC130162.1	60	75.798	ENSCGRG00000018654	-	62	75.798	Cricetulus_griseus_crigri
ENSRNOG00000034030	AC130162.1	60	75.798	ENSCGRG00000019462	-	67	75.798	Cricetulus_griseus_crigri
ENSRNOG00000034030	AC130162.1	57	77.778	ENSCGRG00000018650	-	60	77.778	Cricetulus_griseus_crigri
ENSRNOG00000034030	AC130162.1	60	75.798	ENSCGRG00000019476	-	62	75.798	Cricetulus_griseus_crigri
ENSRNOG00000034030	AC130162.1	59	69.613	ENSOCUG00000029721	-	72	69.613	Oryctolagus_cuniculus
ENSRNOG00000034030	AC130162.1	58	73.851	ENSOARG00000010889	-	66	73.851	Ovis_aries
ENSRNOG00000034030	AC130162.1	58	73.851	ENSOARG00000008210	-	70	73.851	Ovis_aries
ENSRNOG00000034030	AC130162.1	58	74.138	ENSOARG00000001175	-	66	74.138	Ovis_aries
ENSRNOG00000034030	AC130162.1	56	74.030	ENSOARG00000006683	-	86	74.030	Ovis_aries
ENSRNOG00000034030	AC130162.1	58	73.851	ENSOARG00000000057	-	66	73.851	Ovis_aries
ENSRNOG00000034030	AC130162.1	58	73.851	ENSOARG00000005813	-	71	73.851	Ovis_aries
ENSRNOG00000034030	AC130162.1	51	75.391	ENSSSCG00000037444	-	87	75.391	Sus_scrofa
ENSRNOG00000034030	AC130162.1	51	75.000	ENSSSCG00000035060	-	87	75.000	Sus_scrofa
ENSRNOG00000034030	AC130162.1	59	70.914	ENSSSCG00000040911	-	85	70.914	Sus_scrofa
ENSRNOG00000034030	AC130162.1	51	75.781	ENSSSCG00000033555	-	87	75.781	Sus_scrofa
ENSRNOG00000034030	AC130162.1	59	70.914	ENSSSCG00000039414	-	66	70.914	Sus_scrofa
ENSRNOG00000034030	AC130162.1	51	74.609	ENSSSCG00000040141	-	87	74.609	Sus_scrofa
ENSRNOG00000034030	AC130162.1	59	70.360	ENSSSCG00000040939	-	66	70.360	Sus_scrofa
ENSRNOG00000034030	AC130162.1	52	72.372	ENSSSCG00000035697	-	79	70.360	Sus_scrofa
ENSRNOG00000034030	AC130162.1	55	70.360	ENSSSCG00000036442	-	67	70.360	Sus_scrofa