EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000034089 (Gene tree)
Gene ID: 301065
Gene Symbol: Ttc21a
Alias: LOC301065|RGD1308806|Ttc21a-ps1
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 35528 bases
Position: chr8:128622428-128657955
Accession: 1308806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000051323	PPR	PF01535.20	2.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000043831	-	5904	XM_003750604	ENSRNOP00000051323	1314 (aa)	XP_003750652	D3ZZJ4

Gene Model

Click here to download ENSRNOG00000034089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000034089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000034089	Ttc21a	55	82.483	ENSBTAG00000010477	TTC21A	100	82.483	Bos_taurus
ENSRNOG00000034089	Ttc21a	55	82.897	ENSCHIG00000018055	TTC21A	100	82.897	Capra_hircus
ENSRNOG00000034089	Ttc21a	99	90.123	ENSCGRG00001020151	Ttc21a	100	90.123	Cricetulus_griseus_chok1gshd
ENSRNOG00000034089	Ttc21a	99	90.123	ENSCGRG00000012945	Ttc21a	95	90.123	Cricetulus_griseus_crigri
ENSRNOG00000034089	Ttc21a	99	69.672	ENSDORG00000027538	Ttc21a	99	69.672	Dipodomys_ordii
ENSRNOG00000034089	Ttc21a	87	76.556	ENSETEG00000018753	TTC21A	87	76.556	Echinops_telfairi
ENSRNOG00000034089	Ttc21a	100	83.042	ENSJJAG00000005140	Ttc21a	100	83.042	Jaculus_jaculus
ENSRNOG00000034089	Ttc21a	100	95.205	ENSMUSG00000032514	Ttc21a	100	95.205	Mus_musculus
ENSRNOG00000034089	Ttc21a	100	95.129	MGP_PahariEiJ_G0015676	Ttc21a	100	95.129	Mus_pahari
ENSRNOG00000034089	Ttc21a	100	95.282	MGP_SPRETEiJ_G0033957	Ttc21a	100	95.282	Mus_spretus
ENSRNOG00000034089	Ttc21a	100	76.104	ENSPPRG00000012924	TTC21A	100	76.104	Panthera_pardus
ENSRNOG00000034089	Ttc21a	99	91.241	ENSPEMG00000010809	Ttc21a	99	91.241	Peromyscus_maniculatus_bairdii
ENSRNOG00000034089	Ttc21a	100	77.947	ENSUAMG00000020073	TTC21A	99	84.948	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005929	cilium	-	IEA	Component
GO:0030991	intraciliary transport particle A	21873635.	IBA	Component
GO:0035721	intraciliary retrograde transport	21873635.	IBA	Process
GO:0061512	protein localization to cilium	21873635.	IBA	Process