EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000034128 (Gene tree)
Gene ID: 501028
Gene Symbol: RGD1560917
Alias: LOC501028
Full Name: similar to mitochondrial ribosomal protein L41
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 405 bases
Position: chr8:91820783-91821187
Accession: 1560917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000039847	MRP-L27	PF09809.9	1.2e-41	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000043351	-	405	XM_003750552	ENSRNOP00000039847	134 (aa)	XP_003750600	D3ZH23

Gene Model

Click here to download ENSRNOG00000034128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000034128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000034128	RGD1560917	100	98.507	ENSRNOG00000029875	Mrpl41	100	98.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000034128	RGD1560917	100	75.182	ENSG00000182154	MRPL41	100	75.182	Homo_sapiens
ENSRNOG00000034128	RGD1560917	100	63.704	ENSAPOG00000010852	mrpl41	100	63.704	Acanthochromis_polyacanthus
ENSRNOG00000034128	RGD1560917	100	75.556	ENSAMEG00000019969	MRPL41	100	75.556	Ailuropoda_melanoleuca
ENSRNOG00000034128	RGD1560917	100	61.481	ENSACIG00000010909	mrpl41	100	61.481	Amphilophus_citrinellus
ENSRNOG00000034128	RGD1560917	100	64.444	ENSAOCG00000005883	mrpl41	100	64.444	Amphiprion_ocellaris
ENSRNOG00000034128	RGD1560917	60	55.556	ENSAOCG00000000215	-	66	55.556	Amphiprion_ocellaris
ENSRNOG00000034128	RGD1560917	100	58.519	ENSAPEG00000004381	-	100	58.519	Amphiprion_percula
ENSRNOG00000034128	RGD1560917	100	65.185	ENSAPEG00000016952	mrpl41	100	65.185	Amphiprion_percula
ENSRNOG00000034128	RGD1560917	100	62.222	ENSATEG00000011838	mrpl41	100	62.222	Anabas_testudineus
ENSRNOG00000034128	RGD1560917	99	61.940	ENSAPLG00000005103	MRPL41	100	61.940	Anas_platyrhynchos
ENSRNOG00000034128	RGD1560917	100	60.741	ENSACLG00000006623	mrpl41	100	60.741	Astatotilapia_calliptera
ENSRNOG00000034128	RGD1560917	100	62.963	ENSAMXG00000025462	mrpl41	100	62.963	Astyanax_mexicanus
ENSRNOG00000034128	RGD1560917	100	77.778	ENSBTAG00000039138	MRPL41	100	77.778	Bos_taurus
ENSRNOG00000034128	RGD1560917	100	78.832	ENSCJAG00000013417	MRPL41	100	78.832	Callithrix_jacchus
ENSRNOG00000034128	RGD1560917	100	74.074	ENSCAFG00000019403	MRPL41	100	74.074	Canis_familiaris
ENSRNOG00000034128	RGD1560917	100	74.074	ENSCAFG00020003391	MRPL41	100	74.074	Canis_lupus_dingo
ENSRNOG00000034128	RGD1560917	100	74.815	ENSCHIG00000011407	MRPL41	100	74.815	Capra_hircus
ENSRNOG00000034128	RGD1560917	100	87.407	ENSCPOG00000032480	MRPL41	100	87.407	Cavia_porcellus
ENSRNOG00000034128	RGD1560917	100	85.926	ENSCLAG00000009556	MRPL41	100	85.926	Chinchilla_lanigera
ENSRNOG00000034128	RGD1560917	100	76.642	ENSCSAG00000019677	MRPL41	100	76.642	Chlorocebus_sabaeus
ENSRNOG00000034128	RGD1560917	90	68.033	ENSCPBG00000017616	MRPL41	79	68.033	Chrysemys_picta_bellii
ENSRNOG00000034128	RGD1560917	94	71.318	ENSCANG00000036569	MRPL41	100	71.318	Colobus_angolensis_palliatus
ENSRNOG00000034128	RGD1560917	100	91.111	ENSCGRG00001007509	Mrpl41	100	91.111	Cricetulus_griseus_chok1gshd
ENSRNOG00000034128	RGD1560917	100	91.111	ENSCGRG00000007976	Mrpl41	100	91.111	Cricetulus_griseus_crigri
ENSRNOG00000034128	RGD1560917	100	60.000	ENSCSEG00000016033	mrpl41	94	60.000	Cynoglossus_semilaevis
ENSRNOG00000034128	RGD1560917	100	62.222	ENSCVAG00000017212	mrpl41	100	62.222	Cyprinodon_variegatus
ENSRNOG00000034128	RGD1560917	100	62.222	ENSDARG00000002264	mrpl41	100	62.222	Danio_rerio
ENSRNOG00000034128	RGD1560917	100	84.444	ENSDNOG00000014765	MRPL41	100	84.444	Dasypus_novemcinctus
ENSRNOG00000034128	RGD1560917	100	85.926	ENSDORG00000008357	Mrpl41	100	85.926	Dipodomys_ordii
ENSRNOG00000034128	RGD1560917	74	36.364	FBgn0034001	mRpL41	58	36.364	Drosophila_melanogaster
ENSRNOG00000034128	RGD1560917	99	53.383	ENSEBUG00000015313	mrpl41	96	53.383	Eptatretus_burgeri
ENSRNOG00000034128	RGD1560917	100	71.852	ENSEASG00005013949	MRPL41	100	71.852	Equus_asinus_asinus
ENSRNOG00000034128	RGD1560917	100	71.852	ENSECAG00000036878	MRPL41	100	71.852	Equus_caballus
ENSRNOG00000034128	RGD1560917	100	74.074	ENSEEUG00000001102	MRPL41	100	74.074	Erinaceus_europaeus
ENSRNOG00000034128	RGD1560917	99	61.654	ENSELUG00000004010	mrpl41	99	61.654	Esox_lucius
ENSRNOG00000034128	RGD1560917	100	72.593	ENSFCAG00000003590	MRPL41	100	72.593	Felis_catus
ENSRNOG00000034128	RGD1560917	100	71.852	ENSFALG00000014735	MRPL41	100	71.852	Ficedula_albicollis
ENSRNOG00000034128	RGD1560917	100	83.704	ENSFDAG00000001032	MRPL41	100	83.704	Fukomys_damarensis
ENSRNOG00000034128	RGD1560917	100	60.000	ENSFHEG00000022081	mrpl41	100	60.000	Fundulus_heteroclitus
ENSRNOG00000034128	RGD1560917	100	56.296	ENSGMOG00000020559	mrpl41	100	56.296	Gadus_morhua
ENSRNOG00000034128	RGD1560917	100	71.852	ENSGALG00000051567	MRPL41	100	71.852	Gallus_gallus
ENSRNOG00000034128	RGD1560917	100	60.741	ENSGAFG00000013953	mrpl41	100	60.741	Gambusia_affinis
ENSRNOG00000034128	RGD1560917	100	57.778	ENSGACG00000003642	mrpl41	100	57.778	Gasterosteus_aculeatus
ENSRNOG00000034128	RGD1560917	100	65.926	ENSGAGG00000008498	MRPL41	100	65.926	Gopherus_agassizii
ENSRNOG00000034128	RGD1560917	100	75.182	ENSGGOG00000006391	MRPL41	100	75.182	Gorilla_gorilla
ENSRNOG00000034128	RGD1560917	100	60.741	ENSHBUG00000014130	mrpl41	100	60.741	Haplochromis_burtoni
ENSRNOG00000034128	RGD1560917	100	82.963	ENSHGLG00000015326	MRPL41	100	82.963	Heterocephalus_glaber_female
ENSRNOG00000034128	RGD1560917	100	82.963	ENSHGLG00100009514	MRPL41	100	82.963	Heterocephalus_glaber_male
ENSRNOG00000034128	RGD1560917	100	61.481	ENSHCOG00000001577	mrpl41	100	61.481	Hippocampus_comes
ENSRNOG00000034128	RGD1560917	100	63.704	ENSIPUG00000006608	mrpl41	100	63.704	Ictalurus_punctatus
ENSRNOG00000034128	RGD1560917	100	88.148	ENSSTOG00000014737	MRPL41	100	88.148	Ictidomys_tridecemlineatus
ENSRNOG00000034128	RGD1560917	100	88.148	ENSJJAG00000012593	Mrpl41	100	88.148	Jaculus_jaculus
ENSRNOG00000034128	RGD1560917	100	59.259	ENSKMAG00000017776	mrpl41	100	59.259	Kryptolebias_marmoratus
ENSRNOG00000034128	RGD1560917	100	60.741	ENSLBEG00000001506	mrpl41	76	60.741	Labrus_bergylta
ENSRNOG00000034128	RGD1560917	99	69.925	ENSLACG00000015028	MRPL41	99	69.925	Latimeria_chalumnae
ENSRNOG00000034128	RGD1560917	100	65.185	ENSLOCG00000017334	mrpl41	100	65.185	Lepisosteus_oculatus
ENSRNOG00000034128	RGD1560917	100	74.453	ENSMMUG00000039736	MRPL41	100	74.453	Macaca_mulatta
ENSRNOG00000034128	RGD1560917	100	62.963	ENSMAMG00000019315	mrpl41	100	62.963	Mastacembelus_armatus
ENSRNOG00000034128	RGD1560917	100	60.741	ENSMZEG00005004091	mrpl41	100	60.741	Maylandia_zebra
ENSRNOG00000034128	RGD1560917	100	90.370	ENSMAUG00000009177	Mrpl41	100	90.370	Mesocricetus_auratus
ENSRNOG00000034128	RGD1560917	100	91.852	ENSMOCG00000014971	Mrpl41	100	91.852	Microtus_ochrogaster
ENSRNOG00000034128	RGD1560917	98	56.061	ENSMMOG00000009374	mrpl41	98	56.061	Mola_mola
ENSRNOG00000034128	RGD1560917	98	57.576	ENSMMOG00000019343	MRPL41	98	57.576	Mola_mola
ENSRNOG00000034128	RGD1560917	99	81.818	ENSMODG00000023279	MRPL41	99	81.818	Monodelphis_domestica
ENSRNOG00000034128	RGD1560917	99	66.165	ENSMALG00000002204	mrpl41	97	66.165	Monopterus_albus
ENSRNOG00000034128	RGD1560917	100	94.815	MGP_CAROLIEiJ_G0023244	Mrpl41	100	94.815	Mus_caroli
ENSRNOG00000034128	RGD1560917	100	95.556	ENSMUSG00000036850	Mrpl41	100	95.556	Mus_musculus
ENSRNOG00000034128	RGD1560917	100	94.815	MGP_PahariEiJ_G0024702	Mrpl41	100	94.815	Mus_pahari
ENSRNOG00000034128	RGD1560917	100	94.815	MGP_SPRETEiJ_G0024161	Mrpl41	100	94.815	Mus_spretus
ENSRNOG00000034128	RGD1560917	100	87.407	ENSNGAG00000001236	Mrpl41	100	87.407	Nannospalax_galili
ENSRNOG00000034128	RGD1560917	100	61.481	ENSNBRG00000012717	mrpl41	100	61.481	Neolamprologus_brichardi
ENSRNOG00000034128	RGD1560917	100	75.912	ENSNLEG00000009233	MRPL41	100	75.912	Nomascus_leucogenys
ENSRNOG00000034128	RGD1560917	100	71.324	ENSOPRG00000013123	MRPL41	100	71.324	Ochotona_princeps
ENSRNOG00000034128	RGD1560917	100	83.704	ENSODEG00000020311	-	100	83.704	Octodon_degus
ENSRNOG00000034128	RGD1560917	100	83.704	ENSODEG00000019825	-	100	83.704	Octodon_degus
ENSRNOG00000034128	RGD1560917	100	83.704	ENSODEG00000019543	-	100	83.704	Octodon_degus
ENSRNOG00000034128	RGD1560917	100	60.741	ENSONIG00000021295	mrpl41	100	60.741	Oreochromis_niloticus
ENSRNOG00000034128	RGD1560917	100	79.259	ENSOCUG00000006334	MRPL41	100	79.259	Oryctolagus_cuniculus
ENSRNOG00000034128	RGD1560917	100	58.519	ENSORLG00020017144	mrpl41	100	58.519	Oryzias_latipes_hni
ENSRNOG00000034128	RGD1560917	100	60.741	ENSOMEG00000022717	mrpl41	100	60.741	Oryzias_melastigma
ENSRNOG00000034128	RGD1560917	100	76.296	ENSOGAG00000009417	MRPL41	100	76.296	Otolemur_garnettii
ENSRNOG00000034128	RGD1560917	100	75.556	ENSOARG00000004986	-	100	75.556	Ovis_aries
ENSRNOG00000034128	RGD1560917	100	75.556	ENSOARG00000018872	-	100	75.556	Ovis_aries
ENSRNOG00000034128	RGD1560917	100	72.593	ENSPPRG00000021777	-	100	72.593	Panthera_pardus
ENSRNOG00000034128	RGD1560917	100	72.593	ENSPPRG00000021741	-	100	72.593	Panthera_pardus
ENSRNOG00000034128	RGD1560917	100	71.852	ENSPTIG00000008756	MRPL41	100	71.852	Panthera_tigris_altaica
ENSRNOG00000034128	RGD1560917	100	75.182	ENSPTRG00000028973	MRPL41	100	75.182	Pan_troglodytes
ENSRNOG00000034128	RGD1560917	100	62.963	ENSPKIG00000024870	mrpl41	100	62.963	Paramormyrops_kingsleyae
ENSRNOG00000034128	RGD1560917	100	59.259	ENSPMGG00000023856	mrpl41	100	59.259	Periophthalmus_magnuspinnatus
ENSRNOG00000034128	RGD1560917	100	89.630	ENSPEMG00000009904	Mrpl41	100	89.630	Peromyscus_maniculatus_bairdii
ENSRNOG00000034128	RGD1560917	100	82.090	ENSPCIG00000006221	MRPL41	99	82.090	Phascolarctos_cinereus
ENSRNOG00000034128	RGD1560917	71	48.958	ENSPFOG00000020370	mrpl41	100	48.958	Poecilia_formosa
ENSRNOG00000034128	RGD1560917	100	60.741	ENSPLAG00000019431	mrpl41	100	60.741	Poecilia_latipinna
ENSRNOG00000034128	RGD1560917	100	60.000	ENSPMEG00000019997	mrpl41	100	60.000	Poecilia_mexicana
ENSRNOG00000034128	RGD1560917	100	58.519	ENSPREG00000013847	mrpl41	100	58.519	Poecilia_reticulata
ENSRNOG00000034128	RGD1560917	100	75.182	ENSPPYG00000019833	MRPL41	100	75.182	Pongo_abelii
ENSRNOG00000034128	RGD1560917	100	84.444	ENSPCAG00000002732	MRPL41	100	84.444	Procavia_capensis
ENSRNOG00000034128	RGD1560917	100	75.556	ENSPVAG00000009348	MRPL41	100	75.556	Pteropus_vampyrus
ENSRNOG00000034128	RGD1560917	100	60.741	ENSPNYG00000019670	mrpl41	100	60.741	Pundamilia_nyererei
ENSRNOG00000034128	RGD1560917	100	62.222	ENSPNAG00000020354	mrpl41	100	62.222	Pygocentrus_nattereri
ENSRNOG00000034128	RGD1560917	100	77.372	ENSRBIG00000025452	MRPL41	100	77.372	Rhinopithecus_bieti
ENSRNOG00000034128	RGD1560917	100	77.372	ENSRROG00000010444	MRPL41	100	77.372	Rhinopithecus_roxellana
ENSRNOG00000034128	RGD1560917	99	83.333	ENSSHAG00000010614	MRPL41	99	83.333	Sarcophilus_harrisii
ENSRNOG00000034128	RGD1560917	99	65.414	ENSSFOG00015017921	mrpl41	99	65.414	Scleropages_formosus
ENSRNOG00000034128	RGD1560917	99	62.406	ENSSMAG00000012745	mrpl41	99	62.406	Scophthalmus_maximus
ENSRNOG00000034128	RGD1560917	100	62.222	ENSSDUG00000006706	mrpl41	100	62.222	Seriola_dumerili
ENSRNOG00000034128	RGD1560917	100	62.222	ENSSLDG00000012096	mrpl41	100	62.222	Seriola_lalandi_dorsalis
ENSRNOG00000034128	RGD1560917	100	65.926	ENSSPAG00000021217	mrpl41	68	65.926	Stegastes_partitus
ENSRNOG00000034128	RGD1560917	100	79.259	ENSSSCG00000033694	MRPL41	100	79.259	Sus_scrofa
ENSRNOG00000034128	RGD1560917	100	69.630	ENSTGUG00000002699	MRPL41	100	69.630	Taeniopygia_guttata
ENSRNOG00000034128	RGD1560917	100	60.741	ENSTRUG00000013645	mrpl41	100	60.741	Takifugu_rubripes
ENSRNOG00000034128	RGD1560917	99	60.902	ENSTNIG00000003201	mrpl41	99	60.902	Tetraodon_nigroviridis
ENSRNOG00000034128	RGD1560917	66	91.011	ENSTBEG00000002233	-	96	91.011	Tupaia_belangeri
ENSRNOG00000034128	RGD1560917	92	61.417	ENSTBEG00000017268	-	100	61.417	Tupaia_belangeri
ENSRNOG00000034128	RGD1560917	100	78.519	ENSTTRG00000010803	MRPL41	100	78.519	Tursiops_truncatus
ENSRNOG00000034128	RGD1560917	100	76.296	ENSUAMG00000012948	MRPL41	100	76.296	Ursus_americanus
ENSRNOG00000034128	RGD1560917	100	75.556	ENSUMAG00000023505	MRPL41	100	75.556	Ursus_maritimus
ENSRNOG00000034128	RGD1560917	100	74.815	ENSVVUG00000028867	MRPL41	100	74.815	Vulpes_vulpes
ENSRNOG00000034128	RGD1560917	99	63.910	ENSXETG00000003968	mrpl41	99	63.910	Xenopus_tropicalis
ENSRNOG00000034128	RGD1560917	100	60.000	ENSXMAG00000019576	mrpl41	100	60.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0006412	translation	21873635.	IBA	Process