EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000037295 (Gene tree)
Gene ID: 501048
Gene Symbol: Poc1a
Alias: LOC501048|RGD1565004|Wdr51a
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 64403 bases
Position: chr8:114986326-115050728
Accession: 1565004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000038175	eIF2A	PF08662.11	8.6e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000038166	-	1104	XM_008766561	ENSRNOP00000038175	368 (aa)	XP_008764783	D4ABU4

Gene Model

Click here to download ENSRNOG00000037295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000037295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000037295	Poc1a	85	31.387	ENSRNOG00000019670	Wdr3	71	31.387
ENSRNOG00000037295	Poc1a	71	34.231	ENSRNOG00000002253	Wdr5b	93	34.231
ENSRNOG00000037295	Poc1a	71	30.370	ENSRNOG00000014777	Prpf4	56	30.370
ENSRNOG00000037295	Poc1a	71	36.047	ENSRNOG00000008212	Wdr5	91	36.047
ENSRNOG00000037295	Poc1a	73	30.798	ENSRNOG00000020897	Prpf19	56	30.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000037295	Poc1a	100	87.027	ENSG00000164087	POC1A	100	87.027	Homo_sapiens
ENSRNOG00000037295	Poc1a	98	66.851	ENSAPOG00000002677	POC1A	97	76.042	Acanthochromis_polyacanthus
ENSRNOG00000037295	Poc1a	100	87.297	ENSAMEG00000009136	POC1A	90	87.297	Ailuropoda_melanoleuca
ENSRNOG00000037295	Poc1a	98	60.859	ENSACIG00000018288	poc1a	95	60.859	Amphilophus_citrinellus
ENSRNOG00000037295	Poc1a	91	76.389	ENSAOCG00000001066	POC1A	97	76.389	Amphiprion_ocellaris
ENSRNOG00000037295	Poc1a	74	78.967	ENSAPEG00000005795	poc1a	86	78.967	Amphiprion_percula
ENSRNOG00000037295	Poc1a	99	72.703	ENSAPLG00000007756	POC1A	91	72.703	Anas_platyrhynchos
ENSRNOG00000037295	Poc1a	100	87.297	ENSANAG00000030897	POC1A	97	87.297	Aotus_nancymaae
ENSRNOG00000037295	Poc1a	99	64.960	ENSACLG00000017869	POC1A	97	76.307	Astatotilapia_calliptera
ENSRNOG00000037295	Poc1a	73	80.669	ENSAMXG00000024703	poc1a	83	80.669	Astyanax_mexicanus
ENSRNOG00000037295	Poc1a	100	86.757	ENSBTAG00000001471	POC1A	100	86.757	Bos_taurus
ENSRNOG00000037295	Poc1a	100	86.757	ENSCJAG00000005972	POC1A	97	86.757	Callithrix_jacchus
ENSRNOG00000037295	Poc1a	100	80.488	ENSCAFG00020022379	POC1A	97	80.488	Canis_lupus_dingo
ENSRNOG00000037295	Poc1a	100	87.297	ENSCHIG00000002571	POC1A	98	87.297	Capra_hircus
ENSRNOG00000037295	Poc1a	100	87.027	ENSTSYG00000008302	POC1A	91	87.027	Carlito_syrichta
ENSRNOG00000037295	Poc1a	91	78.806	ENSCAPG00000016201	POC1A	88	78.806	Cavia_aperea
ENSRNOG00000037295	Poc1a	100	85.714	ENSCPOG00000006740	POC1A	98	85.714	Cavia_porcellus
ENSRNOG00000037295	Poc1a	100	87.568	ENSCCAG00000023380	POC1A	97	87.568	Cebus_capucinus
ENSRNOG00000037295	Poc1a	100	86.216	ENSCATG00000021822	POC1A	97	86.216	Cercocebus_atys
ENSRNOG00000037295	Poc1a	99	81.199	ENSCLAG00000010593	POC1A	96	81.199	Chinchilla_lanigera
ENSRNOG00000037295	Poc1a	100	86.216	ENSCSAG00000013862	POC1A	100	86.216	Chlorocebus_sabaeus
ENSRNOG00000037295	Poc1a	70	85.992	ENSCPBG00000016728	POC1A	93	85.992	Chrysemys_picta_bellii
ENSRNOG00000037295	Poc1a	99	61.918	ENSCSAVG00000008477	-	97	61.918	Ciona_savignyi
ENSRNOG00000037295	Poc1a	99	86.649	ENSCANG00000033064	POC1A	99	86.649	Colobus_angolensis_palliatus
ENSRNOG00000037295	Poc1a	99	89.101	ENSCGRG00001007357	Poc1a	97	89.101	Cricetulus_griseus_chok1gshd
ENSRNOG00000037295	Poc1a	97	64.246	ENSCSEG00000010287	POC1A	91	64.426	Cynoglossus_semilaevis
ENSRNOG00000037295	Poc1a	98	62.760	ENSCVAG00000015594	POC1A	95	73.264	Cyprinodon_variegatus
ENSRNOG00000037295	Poc1a	96	52.941	ENSEBUG00000002614	POC1A	93	52.941	Eptatretus_burgeri
ENSRNOG00000037295	Poc1a	70	57.823	ENSEBUG00000008246	POC1A	55	57.823	Eptatretus_burgeri
ENSRNOG00000037295	Poc1a	71	61.004	ENSEBUG00000008013	poc1a	81	61.004	Eptatretus_burgeri
ENSRNOG00000037295	Poc1a	98	65.405	ENSELUG00000015504	poc1a	97	65.435	Esox_lucius
ENSRNOG00000037295	Poc1a	100	87.568	ENSFCAG00000015704	POC1A	98	87.568	Felis_catus
ENSRNOG00000037295	Poc1a	99	70.461	ENSFALG00000008922	POC1A	96	70.461	Ficedula_albicollis
ENSRNOG00000037295	Poc1a	100	87.297	ENSFDAG00000011606	POC1A	91	87.297	Fukomys_damarensis
ENSRNOG00000037295	Poc1a	98	61.326	ENSFHEG00000015504	POC1A	94	61.326	Fundulus_heteroclitus
ENSRNOG00000037295	Poc1a	99	70.620	ENSGALG00000034572	-	96	72.807	Gallus_gallus
ENSRNOG00000037295	Poc1a	98	66.396	ENSGACG00000007015	poc1a	94	66.396	Gasterosteus_aculeatus
ENSRNOG00000037295	Poc1a	99	73.098	ENSGAGG00000014637	POC1A	89	73.098	Gopherus_agassizii
ENSRNOG00000037295	Poc1a	100	87.027	ENSGGOG00000006652	POC1A	91	87.027	Gorilla_gorilla
ENSRNOG00000037295	Poc1a	100	86.757	ENSHGLG00000013436	POC1A	96	86.757	Heterocephalus_glaber_female
ENSRNOG00000037295	Poc1a	100	86.757	ENSHGLG00100003479	POC1A	97	86.757	Heterocephalus_glaber_male
ENSRNOG00000037295	Poc1a	98	67.127	ENSIPUG00000001227	POC1A	93	67.127	Ictalurus_punctatus
ENSRNOG00000037295	Poc1a	100	87.297	ENSSTOG00000002638	POC1A	96	87.297	Ictidomys_tridecemlineatus
ENSRNOG00000037295	Poc1a	100	87.568	ENSJJAG00000018739	Poc1a	96	87.568	Jaculus_jaculus
ENSRNOG00000037295	Poc1a	98	70.192	ENSLBEG00000016119	POC1A	96	70.192	Labrus_bergylta
ENSRNOG00000037295	Poc1a	100	65.414	ENSLACG00000018788	POC1A	82	78.246	Latimeria_chalumnae
ENSRNOG00000037295	Poc1a	98	70.241	ENSLOCG00000013801	poc1a	88	70.241	Lepisosteus_oculatus
ENSRNOG00000037295	Poc1a	99	77.507	ENSLAFG00000028434	POC1A	98	85.768	Loxodonta_africana
ENSRNOG00000037295	Poc1a	100	86.216	ENSMFAG00000001970	POC1A	100	86.216	Macaca_fascicularis
ENSRNOG00000037295	Poc1a	100	86.216	ENSMMUG00000012485	POC1A	97	86.216	Macaca_mulatta
ENSRNOG00000037295	Poc1a	100	86.216	ENSMNEG00000042811	POC1A	100	86.216	Macaca_nemestrina
ENSRNOG00000037295	Poc1a	100	86.216	ENSMLEG00000039574	POC1A	100	86.216	Mandrillus_leucophaeus
ENSRNOG00000037295	Poc1a	74	78.229	ENSMAMG00000014233	POC1A	97	78.229	Mastacembelus_armatus
ENSRNOG00000037295	Poc1a	78	76.307	ENSMZEG00005013503	POC1A	97	76.307	Maylandia_zebra
ENSRNOG00000037295	Poc1a	99	63.373	ENSMGAG00000001628	POC1A	96	63.373	Meleagris_gallopavo
ENSRNOG00000037295	Poc1a	99	89.918	ENSMAUG00000017403	Poc1a	97	89.918	Mesocricetus_auratus
ENSRNOG00000037295	Poc1a	100	87.297	ENSMICG00000002709	POC1A	91	87.297	Microcebus_murinus
ENSRNOG00000037295	Poc1a	91	93.731	ENSMOCG00000003396	Poc1a	97	93.731	Microtus_ochrogaster
ENSRNOG00000037295	Poc1a	98	63.736	ENSMMOG00000010427	poc1a	91	63.736	Mola_mola
ENSRNOG00000037295	Poc1a	91	78.635	ENSMODG00000011717	POC1A	87	78.635	Monodelphis_domestica
ENSRNOG00000037295	Poc1a	98	63.260	ENSMALG00000009054	poc1a	91	63.260	Monopterus_albus
ENSRNOG00000037295	Poc1a	100	91.848	MGP_CAROLIEiJ_G0032617	Poc1a	98	91.848	Mus_caroli
ENSRNOG00000037295	Poc1a	100	92.391	ENSMUSG00000023345	Poc1a	96	97.203	Mus_musculus
ENSRNOG00000037295	Poc1a	100	91.848	MGP_PahariEiJ_G0015485	Poc1a	98	91.848	Mus_pahari
ENSRNOG00000037295	Poc1a	100	92.120	MGP_SPRETEiJ_G0033763	Poc1a	98	92.120	Mus_spretus
ENSRNOG00000037295	Poc1a	100	87.297	ENSMPUG00000011723	POC1A	98	87.297	Mustela_putorius_furo
ENSRNOG00000037295	Poc1a	100	86.216	ENSMLUG00000015092	POC1A	90	86.216	Myotis_lucifugus
ENSRNOG00000037295	Poc1a	100	89.702	ENSNGAG00000005212	Poc1a	91	89.702	Nannospalax_galili
ENSRNOG00000037295	Poc1a	99	62.953	ENSNBRG00000022135	poc1a	97	62.953	Neolamprologus_brichardi
ENSRNOG00000037295	Poc1a	100	86.216	ENSNLEG00000007084	POC1A	100	86.216	Nomascus_leucogenys
ENSRNOG00000037295	Poc1a	71	75.000	ENSMEUG00000007715	-	68	75.000	Notamacropus_eugenii
ENSRNOG00000037295	Poc1a	100	83.784	ENSOPRG00000008831	POC1A	91	83.784	Ochotona_princeps
ENSRNOG00000037295	Poc1a	100	85.484	ENSODEG00000018290	POC1A	99	85.484	Octodon_degus
ENSRNOG00000037295	Poc1a	78	75.261	ENSONIG00000014378	POC1A	97	75.261	Oreochromis_niloticus
ENSRNOG00000037295	Poc1a	100	85.946	ENSOCUG00000002080	POC1A	100	85.946	Oryctolagus_cuniculus
ENSRNOG00000037295	Poc1a	98	69.536	ENSOMEG00000019834	POC1A	95	57.210	Oryzias_melastigma
ENSRNOG00000037295	Poc1a	100	82.842	ENSOGAG00000032245	POC1A	91	82.842	Otolemur_garnettii
ENSRNOG00000037295	Poc1a	100	87.297	ENSOARG00000006352	POC1A	98	87.297	Ovis_aries
ENSRNOG00000037295	Poc1a	100	86.757	ENSPPAG00000043583	POC1A	100	86.757	Pan_paniscus
ENSRNOG00000037295	Poc1a	100	87.568	ENSPPRG00000003365	POC1A	98	87.568	Panthera_pardus
ENSRNOG00000037295	Poc1a	100	87.568	ENSPTIG00000005388	POC1A	100	87.568	Panthera_tigris_altaica
ENSRNOG00000037295	Poc1a	100	87.027	ENSPTRG00000014989	POC1A	100	87.027	Pan_troglodytes
ENSRNOG00000037295	Poc1a	74	84.559	ENSPSIG00000014809	POC1A	77	84.559	Pelodiscus_sinensis
ENSRNOG00000037295	Poc1a	99	65.123	ENSPMGG00000005356	poc1a	96	65.123	Periophthalmus_magnuspinnatus
ENSRNOG00000037295	Poc1a	91	92.239	ENSPEMG00000024131	Poc1a	97	94.755	Peromyscus_maniculatus_bairdii
ENSRNOG00000037295	Poc1a	97	58.711	ENSPMAG00000000333	poc1a	90	58.711	Petromyzon_marinus
ENSRNOG00000037295	Poc1a	99	76.438	ENSPCIG00000018160	POC1A	90	78.006	Phascolarctos_cinereus
ENSRNOG00000037295	Poc1a	100	87.027	ENSPPYG00000013816	POC1A	97	87.027	Pongo_abelii
ENSRNOG00000037295	Poc1a	100	83.243	ENSPCAG00000002118	POC1A	98	83.243	Procavia_capensis
ENSRNOG00000037295	Poc1a	100	88.108	ENSPCOG00000012625	POC1A	100	88.108	Propithecus_coquereli
ENSRNOG00000037295	Poc1a	100	65.946	ENSPVAG00000012480	POC1A	91	65.946	Pteropus_vampyrus
ENSRNOG00000037295	Poc1a	99	68.108	ENSPNYG00000019517	poc1a	96	68.108	Pundamilia_nyererei
ENSRNOG00000037295	Poc1a	99	66.921	ENSPNAG00000007556	POC1A	89	66.921	Pygocentrus_nattereri
ENSRNOG00000037295	Poc1a	100	85.946	ENSRBIG00000031748	POC1A	100	85.946	Rhinopithecus_bieti
ENSRNOG00000037295	Poc1a	100	85.946	ENSRROG00000044472	POC1A	100	85.946	Rhinopithecus_roxellana
ENSRNOG00000037295	Poc1a	100	87.568	ENSSBOG00000027902	POC1A	100	87.568	Saimiri_boliviensis_boliviensis
ENSRNOG00000037295	Poc1a	98	65.676	ENSSMAG00000013505	POC1A	93	65.676	Scophthalmus_maximus
ENSRNOG00000037295	Poc1a	78	75.694	ENSSDUG00000016161	POC1A	95	75.694	Seriola_dumerili
ENSRNOG00000037295	Poc1a	78	75.000	ENSSLDG00000003828	POC1A	95	75.000	Seriola_lalandi_dorsalis
ENSRNOG00000037295	Poc1a	94	75.415	ENSSPUG00000008656	POC1A	99	59.817	Sphenodon_punctatus
ENSRNOG00000037295	Poc1a	98	55.285	ENSSPAG00000020330	POC1A	85	55.285	Stegastes_partitus
ENSRNOG00000037295	Poc1a	100	86.216	ENSSSCG00000011426	POC1A	91	86.216	Sus_scrofa
ENSRNOG00000037295	Poc1a	99	70.652	ENSTGUG00000006036	POC1A	97	70.652	Taeniopygia_guttata
ENSRNOG00000037295	Poc1a	97	57.248	ENSTRUG00000007900	POC1A	76	71.984	Takifugu_rubripes
ENSRNOG00000037295	Poc1a	99	52.596	ENSTNIG00000014818	POC1A	96	52.596	Tetraodon_nigroviridis
ENSRNOG00000037295	Poc1a	100	82.973	ENSTTRG00000016798	POC1A	96	82.973	Tursiops_truncatus
ENSRNOG00000037295	Poc1a	100	87.568	ENSUAMG00000020816	POC1A	96	91.319	Ursus_americanus
ENSRNOG00000037295	Poc1a	100	87.568	ENSUMAG00000021482	POC1A	100	87.568	Ursus_maritimus
ENSRNOG00000037295	Poc1a	99	62.245	ENSXETG00000010813	poc1a	89	62.245	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000922	spindle pole	-	IEA	Component
GO:0000922	spindle pole	-	ISO	Component
GO:0003431	growth plate cartilage chondrocyte development	-	IEA	Process
GO:0003431	growth plate cartilage chondrocyte development	-	ISO	Process
GO:0005737	cytoplasm	-	ISO	Component
GO:0005813	centrosome	-	IEA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005814	centriole	-	IEA	Component
GO:0005814	centriole	-	ISO	Component
GO:0007052	mitotic spindle organization	-	IEA	Process
GO:0007052	mitotic spindle organization	-	ISO	Process
GO:0007283	spermatogenesis	-	IEA	Process
GO:0007283	spermatogenesis	-	ISO	Process
GO:0010825	positive regulation of centrosome duplication	-	IEA	Process
GO:0010825	positive regulation of centrosome duplication	-	ISO	Process
GO:0036064	ciliary basal body	-	IEA	Component
GO:0036064	ciliary basal body	-	ISO	Component
GO:0060348	bone development	-	ISO	Process
GO:1905515	non-motile cilium assembly	-	IEA	Process
GO:1905515	non-motile cilium assembly	-	ISO	Process