EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000037604 (Gene tree)
Gene ID: 309887
Gene Symbol: Ascc3
Alias: Helic1|LOC309887|MGC189522
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 302788 bases
Position: chr20:55253686-55556473
Accession: 1307995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000053848	ResIII	PF04851.15	1.9e-26	1	2
ENSRNOP00000053848	ResIII	PF04851.15	1.9e-26	2	2
ENSRNOP00000053848	DEAD	PF00270.29	1.4e-53	1	2
ENSRNOP00000053848	DEAD	PF00270.29	1.4e-53	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000057016	-	7446	XM_006256602	ENSRNOP00000053848	2201 (aa)	XP_006256664	A0A0A0MY43

Gene Model

Click here to download ENSRNOG00000037604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000037604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000037604	Ascc3	81	44.344	ENSRNOG00000012157	Snrnp200	86	42.189
ENSRNOG00000037604	Ascc3	61	36.707	ENSRNOG00000023299	Hfm1	51	36.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000037604	Ascc3	100	92.640	ENSG00000112249	ASCC3	99	92.640	Homo_sapiens
ENSRNOG00000037604	Ascc3	99	90.773	ENSAMEG00000014749	ASCC3	99	90.773	Ailuropoda_melanoleuca
ENSRNOG00000037604	Ascc3	98	70.839	ENSACIG00000004551	ascc3	99	70.793	Amphilophus_citrinellus
ENSRNOG00000037604	Ascc3	100	72.744	ENSAOCG00000005106	ascc3	99	73.152	Amphiprion_ocellaris
ENSRNOG00000037604	Ascc3	96	73.769	ENSAPEG00000006181	ascc3	99	73.769	Amphiprion_percula
ENSRNOG00000037604	Ascc3	99	71.957	ENSATEG00000024950	ascc3	99	71.957	Anabas_testudineus
ENSRNOG00000037604	Ascc3	88	84.238	ENSAPLG00000012589	-	99	84.238	Anas_platyrhynchos
ENSRNOG00000037604	Ascc3	100	80.217	ENSACAG00000010080	ASCC3	99	80.217	Anolis_carolinensis
ENSRNOG00000037604	Ascc3	100	92.276	ENSANAG00000021476	ASCC3	99	92.276	Aotus_nancymaae
ENSRNOG00000037604	Ascc3	86	77.164	ENSACLG00000006736	ascc3	97	77.164	Astatotilapia_calliptera
ENSRNOG00000037604	Ascc3	99	70.937	ENSAMXG00000001395	ascc3	99	71.099	Astyanax_mexicanus
ENSRNOG00000037604	Ascc3	99	90.091	ENSBTAG00000020482	ASCC3	99	90.091	Bos_taurus
ENSRNOG00000037604	Ascc3	88	46.907	WBGene00013189	Y54E2A.4	99	45.276	Caenorhabditis_elegans
ENSRNOG00000037604	Ascc3	100	92.185	ENSCJAG00000001507	ASCC3	100	93.517	Callithrix_jacchus
ENSRNOG00000037604	Ascc3	99	90.818	ENSCAFG00000003554	ASCC3	99	90.818	Canis_familiaris
ENSRNOG00000037604	Ascc3	99	90.773	ENSCAFG00020016899	ASCC3	99	90.773	Canis_lupus_dingo
ENSRNOG00000037604	Ascc3	99	90.091	ENSCHIG00000023605	ASCC3	99	90.091	Capra_hircus
ENSRNOG00000037604	Ascc3	89	93.571	ENSTSYG00000006324	ASCC3	100	93.571	Carlito_syrichta
ENSRNOG00000037604	Ascc3	92	88.487	ENSCAPG00000010888	ASCC3	99	88.487	Cavia_aperea
ENSRNOG00000037604	Ascc3	99	91.219	ENSCPOG00000013989	ASCC3	99	91.219	Cavia_porcellus
ENSRNOG00000037604	Ascc3	100	92.458	ENSCCAG00000024230	ASCC3	99	92.458	Cebus_capucinus
ENSRNOG00000037604	Ascc3	100	93.003	ENSCATG00000011281	ASCC3	99	93.003	Cercocebus_atys
ENSRNOG00000037604	Ascc3	100	92.503	ENSCLAG00000009794	ASCC3	99	92.503	Chinchilla_lanigera
ENSRNOG00000037604	Ascc3	100	92.821	ENSCSAG00000014674	ASCC3	99	92.821	Chlorocebus_sabaeus
ENSRNOG00000037604	Ascc3	93	85.216	ENSCHOG00000002063	ASCC3	85	85.216	Choloepus_hoffmanni
ENSRNOG00000037604	Ascc3	100	82.385	ENSCPBG00000003881	ASCC3	99	82.340	Chrysemys_picta_bellii
ENSRNOG00000037604	Ascc3	82	59.922	ENSCSAVG00000007670	-	100	68.545	Ciona_savignyi
ENSRNOG00000037604	Ascc3	100	92.958	ENSCANG00000004215	ASCC3	99	92.958	Colobus_angolensis_palliatus
ENSRNOG00000037604	Ascc3	99	94.219	ENSCGRG00001000918	Ascc3	99	94.219	Cricetulus_griseus_chok1gshd
ENSRNOG00000037604	Ascc3	100	94.321	ENSCGRG00000012933	Ascc3	99	94.321	Cricetulus_griseus_crigri
ENSRNOG00000037604	Ascc3	99	72.094	ENSCSEG00000012811	ascc3	99	71.834	Cynoglossus_semilaevis
ENSRNOG00000037604	Ascc3	100	70.894	ENSCVAG00000013014	ascc3	99	70.939	Cyprinodon_variegatus
ENSRNOG00000037604	Ascc3	92	72.250	ENSDARG00000086678	ascc3	100	84.848	Danio_rerio
ENSRNOG00000037604	Ascc3	80	95.885	ENSDNOG00000010279	ASCC3	99	95.885	Dasypus_novemcinctus
ENSRNOG00000037604	Ascc3	100	92.912	ENSDORG00000008572	Ascc3	99	92.912	Dipodomys_ordii
ENSRNOG00000037604	Ascc3	89	54.342	FBgn0038344	obe	89	54.342	Drosophila_melanogaster
ENSRNOG00000037604	Ascc3	82	97.394	ENSETEG00000010694	-	72	97.394	Echinops_telfairi
ENSRNOG00000037604	Ascc3	54	79.079	ENSEBUG00000007355	-	99	79.079	Eptatretus_burgeri
ENSRNOG00000037604	Ascc3	99	90.682	ENSEASG00005006324	ASCC3	99	90.682	Equus_asinus_asinus
ENSRNOG00000037604	Ascc3	99	90.727	ENSECAG00000012013	ASCC3	99	90.727	Equus_caballus
ENSRNOG00000037604	Ascc3	88	81.771	ENSEEUG00000009748	ASCC3	99	81.771	Erinaceus_europaeus
ENSRNOG00000037604	Ascc3	99	76.740	ENSELUG00000023441	ascc3	99	76.740	Esox_lucius
ENSRNOG00000037604	Ascc3	99	91.182	ENSFCAG00000031266	ASCC3	99	91.182	Felis_catus
ENSRNOG00000037604	Ascc3	99	81.975	ENSFALG00000005260	ASCC3	99	81.975	Ficedula_albicollis
ENSRNOG00000037604	Ascc3	100	91.640	ENSFDAG00000011358	ASCC3	99	91.640	Fukomys_damarensis
ENSRNOG00000037604	Ascc3	99	72.170	ENSFHEG00000019247	ascc3	99	79.111	Fundulus_heteroclitus
ENSRNOG00000037604	Ascc3	98	70.548	ENSGMOG00000018158	ascc3	99	70.561	Gadus_morhua
ENSRNOG00000037604	Ascc3	100	81.674	ENSGALG00000015465	ASCC3	99	81.674	Gallus_gallus
ENSRNOG00000037604	Ascc3	100	71.461	ENSGACG00000014141	ascc3	99	71.506	Gasterosteus_aculeatus
ENSRNOG00000037604	Ascc3	89	84.871	ENSGAGG00000020794	ASCC3	99	84.871	Gopherus_agassizii
ENSRNOG00000037604	Ascc3	100	92.640	ENSGGOG00000002790	ASCC3	99	92.640	Gorilla_gorilla
ENSRNOG00000037604	Ascc3	89	72.931	ENSHBUG00000015110	ascc3	98	72.996	Haplochromis_burtoni
ENSRNOG00000037604	Ascc3	100	92.004	ENSHGLG00000002093	ASCC3	99	92.004	Heterocephalus_glaber_female
ENSRNOG00000037604	Ascc3	99	90.214	ENSHGLG00100005896	ASCC3	99	90.214	Heterocephalus_glaber_male
ENSRNOG00000037604	Ascc3	99	72.051	ENSHCOG00000021142	ascc3	100	72.051	Hippocampus_comes
ENSRNOG00000037604	Ascc3	99	73.089	ENSIPUG00000013863	ascc3	99	73.134	Ictalurus_punctatus
ENSRNOG00000037604	Ascc3	100	90.777	ENSSTOG00000006645	ASCC3	99	90.777	Ictidomys_tridecemlineatus
ENSRNOG00000037604	Ascc3	100	91.186	ENSJJAG00000022570	Ascc3	99	91.186	Jaculus_jaculus
ENSRNOG00000037604	Ascc3	100	72.365	ENSKMAG00000003953	ascc3	99	72.411	Kryptolebias_marmoratus
ENSRNOG00000037604	Ascc3	85	77.166	ENSLBEG00000009623	ascc3	99	77.273	Labrus_bergylta
ENSRNOG00000037604	Ascc3	74	81.703	ENSLACG00000015253	ascc3	99	81.703	Latimeria_chalumnae
ENSRNOG00000037604	Ascc3	99	76.659	ENSLOCG00000016550	ascc3	99	76.659	Lepisosteus_oculatus
ENSRNOG00000037604	Ascc3	89	78.741	ENSLAFG00000011363	ASCC3	100	78.741	Loxodonta_africana
ENSRNOG00000037604	Ascc3	100	92.912	ENSMFAG00000002081	ASCC3	99	92.912	Macaca_fascicularis
ENSRNOG00000037604	Ascc3	100	92.958	ENSMMUG00000022287	ASCC3	99	92.958	Macaca_mulatta
ENSRNOG00000037604	Ascc3	100	92.867	ENSMNEG00000032760	ASCC3	99	92.867	Macaca_nemestrina
ENSRNOG00000037604	Ascc3	100	91.712	ENSMLEG00000035241	ASCC3	99	91.712	Mandrillus_leucophaeus
ENSRNOG00000037604	Ascc3	100	72.456	ENSMAMG00000005917	ascc3	99	72.501	Mastacembelus_armatus
ENSRNOG00000037604	Ascc3	75	80.921	ENSMZEG00005002710	ascc3	73	80.986	Maylandia_zebra
ENSRNOG00000037604	Ascc3	100	80.561	ENSMGAG00000013551	ASCC3	99	80.561	Meleagris_gallopavo
ENSRNOG00000037604	Ascc3	100	94.502	ENSMAUG00000018304	Ascc3	99	94.502	Mesocricetus_auratus
ENSRNOG00000037604	Ascc3	100	93.321	ENSMICG00000008861	ASCC3	99	93.321	Microcebus_murinus
ENSRNOG00000037604	Ascc3	100	94.593	ENSMOCG00000004549	Ascc3	99	94.593	Microtus_ochrogaster
ENSRNOG00000037604	Ascc3	96	69.456	ENSMMOG00000003198	ascc3	99	69.438	Mola_mola
ENSRNOG00000037604	Ascc3	100	85.455	ENSMODG00000018082	ASCC3	99	85.455	Monodelphis_domestica
ENSRNOG00000037604	Ascc3	96	69.981	ENSMALG00000015536	ascc3	99	69.981	Monopterus_albus
ENSRNOG00000037604	Ascc3	100	96.956	MGP_CAROLIEiJ_G0015302	Ascc3	99	96.956	Mus_caroli
ENSRNOG00000037604	Ascc3	100	96.638	ENSMUSG00000038774	Ascc3	99	96.638	Mus_musculus
ENSRNOG00000037604	Ascc3	100	96.729	MGP_SPRETEiJ_G0016111	Ascc3	99	96.729	Mus_spretus
ENSRNOG00000037604	Ascc3	99	91.000	ENSMPUG00000001675	ASCC3	99	91.000	Mustela_putorius_furo
ENSRNOG00000037604	Ascc3	99	90.091	ENSMLUG00000002886	ASCC3	99	90.091	Myotis_lucifugus
ENSRNOG00000037604	Ascc3	100	93.321	ENSNGAG00000000702	Ascc3	99	93.321	Nannospalax_galili
ENSRNOG00000037604	Ascc3	84	66.461	ENSNBRG00000022083	ascc3	92	66.461	Neolamprologus_brichardi
ENSRNOG00000037604	Ascc3	100	92.549	ENSNLEG00000013890	ASCC3	99	92.549	Nomascus_leucogenys
ENSRNOG00000037604	Ascc3	99	96.491	ENSMEUG00000003061	ASCC3	85	96.491	Notamacropus_eugenii
ENSRNOG00000037604	Ascc3	88	98.667	ENSOPRG00000010249	-	79	98.667	Ochotona_princeps
ENSRNOG00000037604	Ascc3	100	92.095	ENSODEG00000000069	ASCC3	99	92.095	Octodon_degus
ENSRNOG00000037604	Ascc3	100	71.913	ENSONIG00000016540	ascc3	99	71.958	Oreochromis_niloticus
ENSRNOG00000037604	Ascc3	100	83.500	ENSOANG00000008944	ASCC3	99	83.500	Ornithorhynchus_anatinus
ENSRNOG00000037604	Ascc3	99	92.711	ENSOCUG00000002766	ASCC3	99	92.711	Oryctolagus_cuniculus
ENSRNOG00000037604	Ascc3	95	72.571	ENSORLG00000004221	ascc3	99	72.666	Oryzias_latipes
ENSRNOG00000037604	Ascc3	86	77.513	ENSORLG00020022595	ascc3	97	77.513	Oryzias_latipes_hni
ENSRNOG00000037604	Ascc3	95	72.571	ENSORLG00015009231	ascc3	99	72.666	Oryzias_latipes_hsok
ENSRNOG00000037604	Ascc3	99	71.266	ENSOMEG00000019630	ascc3	100	71.266	Oryzias_melastigma
ENSRNOG00000037604	Ascc3	89	91.562	ENSOGAG00000009875	ASCC3	100	91.562	Otolemur_garnettii
ENSRNOG00000037604	Ascc3	99	90.182	ENSOARG00000011627	ASCC3	99	90.182	Ovis_aries
ENSRNOG00000037604	Ascc3	100	92.685	ENSPPAG00000030772	ASCC3	99	92.685	Pan_paniscus
ENSRNOG00000037604	Ascc3	99	91.091	ENSPPRG00000011358	ASCC3	99	91.091	Panthera_pardus
ENSRNOG00000037604	Ascc3	99	90.909	ENSPTIG00000006331	ASCC3	99	90.909	Panthera_tigris_altaica
ENSRNOG00000037604	Ascc3	100	92.640	ENSPTRG00000018448	ASCC3	99	92.640	Pan_troglodytes
ENSRNOG00000037604	Ascc3	100	92.912	ENSPANG00000006307	ASCC3	99	92.912	Papio_anubis
ENSRNOG00000037604	Ascc3	99	73.632	ENSPKIG00000013639	ascc3	99	73.689	Paramormyrops_kingsleyae
ENSRNOG00000037604	Ascc3	78	85.099	ENSPSIG00000002620	-	96	85.099	Pelodiscus_sinensis
ENSRNOG00000037604	Ascc3	100	95.093	ENSPEMG00000015319	Ascc3	99	95.093	Peromyscus_maniculatus_bairdii
ENSRNOG00000037604	Ascc3	68	78.929	ENSPMAG00000002163	-	100	78.929	Petromyzon_marinus
ENSRNOG00000037604	Ascc3	100	85.546	ENSPCIG00000017288	ASCC3	99	85.932	Phascolarctos_cinereus
ENSRNOG00000037604	Ascc3	88	74.665	ENSPFOG00000001462	ascc3	98	74.716	Poecilia_formosa
ENSRNOG00000037604	Ascc3	99	72.567	ENSPREG00000017616	ascc3	99	72.612	Poecilia_reticulata
ENSRNOG00000037604	Ascc3	100	91.277	ENSPPYG00000016869	ASCC3	99	91.277	Pongo_abelii
ENSRNOG00000037604	Ascc3	100	79.691	ENSPCAG00000008834	ASCC3	99	79.691	Procavia_capensis
ENSRNOG00000037604	Ascc3	99	83.318	ENSPVAG00000012827	ASCC3	99	83.318	Pteropus_vampyrus
ENSRNOG00000037604	Ascc3	86	77.111	ENSPNYG00000018913	ascc3	97	77.111	Pundamilia_nyererei
ENSRNOG00000037604	Ascc3	86	78.761	ENSPNAG00000016413	ascc3	97	78.783	Pygocentrus_nattereri
ENSRNOG00000037604	Ascc3	100	92.912	ENSRROG00000045402	ASCC3	99	92.912	Rhinopithecus_roxellana
ENSRNOG00000037604	Ascc3	72	48.265	YGR271W	-	81	48.265	Saccharomyces_cerevisiae
ENSRNOG00000037604	Ascc3	100	92.458	ENSSBOG00000025142	ASCC3	99	92.458	Saimiri_boliviensis_boliviensis
ENSRNOG00000037604	Ascc3	100	85.358	ENSSHAG00000016496	ASCC3	99	85.358	Sarcophilus_harrisii
ENSRNOG00000037604	Ascc3	100	73.273	ENSSFOG00015010273	ascc3	99	73.511	Scleropages_formosus
ENSRNOG00000037604	Ascc3	100	72.029	ENSSMAG00000012927	ascc3	99	72.210	Scophthalmus_maximus
ENSRNOG00000037604	Ascc3	99	72.353	ENSSDUG00000010897	ascc3	99	72.353	Seriola_dumerili
ENSRNOG00000037604	Ascc3	99	72.295	ENSSLDG00000021782	ascc3	99	72.295	Seriola_lalandi_dorsalis
ENSRNOG00000037604	Ascc3	99	86.337	ENSSARG00000001858	ASCC3	92	86.337	Sorex_araneus
ENSRNOG00000037604	Ascc3	100	82.127	ENSSPUG00000001842	ASCC3	99	82.127	Sphenodon_punctatus
ENSRNOG00000037604	Ascc3	100	72.637	ENSSPAG00000007677	ascc3	99	72.637	Stegastes_partitus
ENSRNOG00000037604	Ascc3	99	90.591	ENSSSCG00000004358	ASCC3	99	91.459	Sus_scrofa
ENSRNOG00000037604	Ascc3	90	83.552	ENSTGUG00000012262	ASCC3	99	83.552	Taeniopygia_guttata
ENSRNOG00000037604	Ascc3	98	66.959	ENSTNIG00000005079	ascc3	100	67.082	Tetraodon_nigroviridis
ENSRNOG00000037604	Ascc3	91	94.030	ENSTBEG00000015236	ASCC3	86	94.030	Tupaia_belangeri
ENSRNOG00000037604	Ascc3	99	90.012	ENSTTRG00000008255	ASCC3	96	90.012	Tursiops_truncatus
ENSRNOG00000037604	Ascc3	68	95.709	ENSUAMG00000023340	-	99	94.434	Ursus_americanus
ENSRNOG00000037604	Ascc3	99	89.864	ENSUMAG00000021200	ASCC3	99	89.864	Ursus_maritimus
ENSRNOG00000037604	Ascc3	99	86.188	ENSVPAG00000001408	ASCC3	99	86.188	Vicugna_pacos
ENSRNOG00000037604	Ascc3	99	90.955	ENSVVUG00000015397	ASCC3	99	91.959	Vulpes_vulpes
ENSRNOG00000037604	Ascc3	79	80.141	ENSXETG00000032212	-	99	80.141	Xenopus_tropicalis
ENSRNOG00000037604	Ascc3	99	72.295	ENSXMAG00000000071	ascc3	99	72.340	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006307	DNA dealkylation involved in DNA repair	21873635.	IBA	Process
GO:0006307	DNA dealkylation involved in DNA repair	-	IEA	Process
GO:0006307	DNA dealkylation involved in DNA repair	-	ISO	Process
GO:0006307	DNA dealkylation involved in DNA repair	-	ISS	Process
GO:0008026	ATP-dependent helicase activity	21873635.	IBA	Function
GO:0008283	cell proliferation	-	IEA	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0008283	cell proliferation	-	ISS	Process
GO:0016607	nuclear speck	-	IEA	Component
GO:0032508	DNA duplex unwinding	-	IEA	Process
GO:0032508	DNA duplex unwinding	-	ISO	Process
GO:0032508	DNA duplex unwinding	-	ISS	Process
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	IEA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	ISO	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	ISS	Function
GO:0099053	activating signal cointegrator 1 complex	-	IEA	Component
GO:0099053	activating signal cointegrator 1 complex	-	ISO	Component