EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000037655 (Gene tree)
Gene ID: 361974
Gene Symbol: Gatb
Alias: LOC361974|Pet112l
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 78963 bases
Position: chr2:184600721-184679683
Accession: 1307864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000064303	GatB_Yqey	PF02637.18	1.2e-44	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075823	-	1700	XM_003749312	ENSRNOP00000064303	557 (aa)	XP_001066526	M0R4L6
ENSRNOT00000093746	-	1453	-	-	- (aa)	-	-
ENSRNOT00000093178	-	672	-	ENSRNOP00000076215	146 (aa)	-	A0A1W2Q6B9
ENSRNOT00000093330	-	1562	-	ENSRNOP00000076308	136 (aa)	-	A0A1W2Q6K7

Gene Model

Click here to download ENSRNOG00000037655's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00970	Aminoacyl-tRNA biosynthesis	KEGG
rno01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000037655's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000037655	Gatb	100	83.483	ENSG00000059691	GATB	100	83.483	Homo_sapiens
ENSRNOG00000037655	Gatb	94	63.118	ENSAPOG00000022676	gatb	96	63.118	Acanthochromis_polyacanthus
ENSRNOG00000037655	Gatb	99	81.753	ENSAMEG00000018434	GATB	99	81.753	Ailuropoda_melanoleuca
ENSRNOG00000037655	Gatb	78	63.616	ENSACIG00000015827	gatb	100	63.616	Amphilophus_citrinellus
ENSRNOG00000037655	Gatb	89	65.594	ENSAOCG00000009635	gatb	95	65.594	Amphiprion_ocellaris
ENSRNOG00000037655	Gatb	89	62.978	ENSAPEG00000023666	gatb	94	62.978	Amphiprion_percula
ENSRNOG00000037655	Gatb	93	62.934	ENSATEG00000011821	gatb	98	61.905	Anabas_testudineus
ENSRNOG00000037655	Gatb	89	72.672	ENSAPLG00000003933	GATB	99	72.672	Anas_platyrhynchos
ENSRNOG00000037655	Gatb	99	67.143	ENSACAG00000002772	GATB	100	67.143	Anolis_carolinensis
ENSRNOG00000037655	Gatb	100	83.303	ENSANAG00000020953	GATB	100	83.303	Aotus_nancymaae
ENSRNOG00000037655	Gatb	80	65.111	ENSACLG00000026091	gatb	91	65.111	Astatotilapia_calliptera
ENSRNOG00000037655	Gatb	89	60.922	ENSAMXG00000021662	gatb	89	60.521	Astyanax_mexicanus
ENSRNOG00000037655	Gatb	99	80.935	ENSBTAG00000013914	GATB	99	80.935	Bos_taurus
ENSRNOG00000037655	Gatb	99	82.734	ENSCJAG00000002147	GATB	99	82.734	Callithrix_jacchus
ENSRNOG00000037655	Gatb	99	80.935	ENSCAFG00000008088	GATB	99	80.935	Canis_familiaris
ENSRNOG00000037655	Gatb	99	81.115	ENSCAFG00020026686	GATB	98	82.803	Canis_lupus_dingo
ENSRNOG00000037655	Gatb	99	81.295	ENSCHIG00000020111	GATB	99	81.295	Capra_hircus
ENSRNOG00000037655	Gatb	99	84.712	ENSTSYG00000009976	GATB	99	84.712	Carlito_syrichta
ENSRNOG00000037655	Gatb	99	69.620	ENSCAPG00000010977	GATB	99	69.620	Cavia_aperea
ENSRNOG00000037655	Gatb	99	80.289	ENSCPOG00000005023	GATB	99	80.289	Cavia_porcellus
ENSRNOG00000037655	Gatb	85	83.652	ENSCCAG00000021445	GATB	95	83.652	Cebus_capucinus
ENSRNOG00000037655	Gatb	99	83.094	ENSCATG00000034281	GATB	99	83.094	Cercocebus_atys
ENSRNOG00000037655	Gatb	99	82.278	ENSCLAG00000005772	GATB	99	83.191	Chinchilla_lanigera
ENSRNOG00000037655	Gatb	99	83.094	ENSCSAG00000003318	GATB	99	83.094	Chlorocebus_sabaeus
ENSRNOG00000037655	Gatb	99	78.417	ENSCHOG00000008476	GATB	99	78.417	Choloepus_hoffmanni
ENSRNOG00000037655	Gatb	96	69.460	ENSCPBG00000025824	GATB	97	69.460	Chrysemys_picta_bellii
ENSRNOG00000037655	Gatb	99	82.734	ENSCANG00000029227	GATB	99	82.734	Colobus_angolensis_palliatus
ENSRNOG00000037655	Gatb	100	89.048	ENSCGRG00001024051	GATB	100	89.048	Cricetulus_griseus_chok1gshd
ENSRNOG00000037655	Gatb	100	89.048	ENSCGRG00000012974	GATB	100	89.048	Cricetulus_griseus_crigri
ENSRNOG00000037655	Gatb	92	63.086	ENSCSEG00000004009	gatb	100	61.556	Cynoglossus_semilaevis
ENSRNOG00000037655	Gatb	89	65.191	ENSCVAG00000017180	gatb	99	65.191	Cyprinodon_variegatus
ENSRNOG00000037655	Gatb	89	65.657	ENSDARG00000037309	gatb	90	65.657	Danio_rerio
ENSRNOG00000037655	Gatb	99	79.211	ENSDNOG00000012683	GATB	100	79.211	Dasypus_novemcinctus
ENSRNOG00000037655	Gatb	99	83.213	ENSDORG00000010241	Gatb	99	83.213	Dipodomys_ordii
ENSRNOG00000037655	Gatb	92	46.394	FBgn0039153	GatB	97	46.394	Drosophila_melanogaster
ENSRNOG00000037655	Gatb	99	60.612	ENSETEG00000002356	GATB	99	60.612	Echinops_telfairi
ENSRNOG00000037655	Gatb	99	83.813	ENSEASG00005015868	GATB	99	83.813	Equus_asinus_asinus
ENSRNOG00000037655	Gatb	99	82.194	ENSECAG00000003539	GATB	99	82.194	Equus_caballus
ENSRNOG00000037655	Gatb	85	73.256	ENSEEUG00000002311	GATB	85	73.256	Erinaceus_europaeus
ENSRNOG00000037655	Gatb	91	63.922	ENSELUG00000013584	gatb	98	63.725	Esox_lucius
ENSRNOG00000037655	Gatb	99	81.295	ENSFCAG00000003207	GATB	99	81.295	Felis_catus
ENSRNOG00000037655	Gatb	80	69.575	ENSFALG00000002209	GATB	99	69.575	Ficedula_albicollis
ENSRNOG00000037655	Gatb	99	81.835	ENSFDAG00000006426	GATB	99	82.979	Fukomys_damarensis
ENSRNOG00000037655	Gatb	92	63.672	ENSFHEG00000008643	GATB	93	63.672	Fundulus_heteroclitus
ENSRNOG00000037655	Gatb	88	65.244	ENSGMOG00000001575	gatb	100	65.244	Gadus_morhua
ENSRNOG00000037655	Gatb	89	72.065	ENSGALG00000010097	GATB	91	72.065	Gallus_gallus
ENSRNOG00000037655	Gatb	92	62.718	ENSGAFG00000014422	gatb	94	62.718	Gambusia_affinis
ENSRNOG00000037655	Gatb	88	64.082	ENSGACG00000017143	gatb	99	64.082	Gasterosteus_aculeatus
ENSRNOG00000037655	Gatb	99	67.621	ENSGAGG00000007826	GATB	99	67.621	Gopherus_agassizii
ENSRNOG00000037655	Gatb	100	83.303	ENSGGOG00000011099	GATB	100	83.303	Gorilla_gorilla
ENSRNOG00000037655	Gatb	93	64.299	ENSHBUG00000009656	gatb	95	64.299	Haplochromis_burtoni
ENSRNOG00000037655	Gatb	99	81.736	ENSHGLG00000001316	GATB	100	83.051	Heterocephalus_glaber_female
ENSRNOG00000037655	Gatb	99	81.555	ENSHGLG00100004289	GATB	99	82.979	Heterocephalus_glaber_male
ENSRNOG00000037655	Gatb	89	63.783	ENSHCOG00000006270	gatb	90	63.783	Hippocampus_comes
ENSRNOG00000037655	Gatb	97	60.623	ENSIPUG00000013560	gatb	98	60.623	Ictalurus_punctatus
ENSRNOG00000037655	Gatb	100	82.944	ENSSTOG00000005689	GATB	100	82.944	Ictidomys_tridecemlineatus
ENSRNOG00000037655	Gatb	99	82.554	ENSJJAG00000016979	Gatb	99	84.255	Jaculus_jaculus
ENSRNOG00000037655	Gatb	90	65.606	ENSKMAG00000004727	gatb	92	65.606	Kryptolebias_marmoratus
ENSRNOG00000037655	Gatb	90	63.780	ENSLBEG00000019511	gatb	93	63.780	Labrus_bergylta
ENSRNOG00000037655	Gatb	89	62.348	ENSLACG00000004352	GATB	97	62.048	Latimeria_chalumnae
ENSRNOG00000037655	Gatb	89	60.241	ENSLOCG00000008564	gatb	89	60.241	Lepisosteus_oculatus
ENSRNOG00000037655	Gatb	99	80.576	ENSLAFG00000022607	GATB	99	80.576	Loxodonta_africana
ENSRNOG00000037655	Gatb	99	83.094	ENSMMUG00000011048	GATB	99	83.094	Macaca_mulatta
ENSRNOG00000037655	Gatb	99	83.273	ENSMNEG00000040147	GATB	99	83.273	Macaca_nemestrina
ENSRNOG00000037655	Gatb	99	82.374	ENSMLEG00000042135	GATB	99	82.374	Mandrillus_leucophaeus
ENSRNOG00000037655	Gatb	93	63.391	ENSMAMG00000013256	gatb	95	63.391	Mastacembelus_armatus
ENSRNOG00000037655	Gatb	95	64.151	ENSMZEG00005008495	gatb	97	64.151	Maylandia_zebra
ENSRNOG00000037655	Gatb	89	73.077	ENSMGAG00000004276	GATB	98	73.077	Meleagris_gallopavo
ENSRNOG00000037655	Gatb	100	89.228	ENSMAUG00000019099	Gatb	100	89.228	Mesocricetus_auratus
ENSRNOG00000037655	Gatb	99	83.813	ENSMICG00000004311	GATB	99	83.813	Microcebus_murinus
ENSRNOG00000037655	Gatb	100	91.023	ENSMOCG00000017566	Gatb	100	91.023	Microtus_ochrogaster
ENSRNOG00000037655	Gatb	89	55.131	ENSMMOG00000005376	gatb	87	55.131	Mola_mola
ENSRNOG00000037655	Gatb	99	73.514	ENSMODG00000001031	GATB	99	73.514	Monodelphis_domestica
ENSRNOG00000037655	Gatb	90	64.741	ENSMALG00000003418	gatb	91	66.239	Monopterus_albus
ENSRNOG00000037655	Gatb	100	92.998	MGP_CAROLIEiJ_G0025120	Gatb	100	92.998	Mus_caroli
ENSRNOG00000037655	Gatb	100	93.537	ENSMUSG00000028085	Gatb	100	93.537	Mus_musculus
ENSRNOG00000037655	Gatb	100	94.075	MGP_PahariEiJ_G0026563	Gatb	100	94.075	Mus_pahari
ENSRNOG00000037655	Gatb	100	93.357	MGP_SPRETEiJ_G0026062	Gatb	100	93.357	Mus_spretus
ENSRNOG00000037655	Gatb	99	81.835	ENSMPUG00000007394	GATB	99	81.835	Mustela_putorius_furo
ENSRNOG00000037655	Gatb	99	82.914	ENSMLUG00000008194	GATB	99	82.914	Myotis_lucifugus
ENSRNOG00000037655	Gatb	99	85.072	ENSNGAG00000002152	Gatb	99	85.532	Nannospalax_galili
ENSRNOG00000037655	Gatb	78	64.237	ENSNBRG00000005947	gatb	100	64.237	Neolamprologus_brichardi
ENSRNOG00000037655	Gatb	100	83.303	ENSNLEG00000005836	GATB	100	83.303	Nomascus_leucogenys
ENSRNOG00000037655	Gatb	89	76.566	ENSMEUG00000001479	GATB	99	76.566	Notamacropus_eugenii
ENSRNOG00000037655	Gatb	100	81.508	ENSOPRG00000011496	GATB	99	81.508	Ochotona_princeps
ENSRNOG00000037655	Gatb	99	81.917	ENSODEG00000005429	GATB	99	83.191	Octodon_degus
ENSRNOG00000037655	Gatb	95	63.774	ENSONIG00000010059	gatb	97	63.774	Oreochromis_niloticus
ENSRNOG00000037655	Gatb	78	74.483	ENSOANG00000005282	GATB	99	74.483	Ornithorhynchus_anatinus
ENSRNOG00000037655	Gatb	99	81.475	ENSOCUG00000016875	GATB	99	81.475	Oryctolagus_cuniculus
ENSRNOG00000037655	Gatb	88	63.286	ENSORLG00000007740	gatb	99	63.286	Oryzias_latipes
ENSRNOG00000037655	Gatb	92	63.514	ENSORLG00020016385	gatb	94	63.514	Oryzias_latipes_hni
ENSRNOG00000037655	Gatb	92	63.230	ENSOMEG00000003089	gatb	95	62.572	Oryzias_melastigma
ENSRNOG00000037655	Gatb	99	80.935	ENSOGAG00000014181	GATB	99	80.935	Otolemur_garnettii
ENSRNOG00000037655	Gatb	99	80.680	ENSOARG00000004355	GATB	99	80.680	Ovis_aries
ENSRNOG00000037655	Gatb	100	83.483	ENSPPAG00000041690	GATB	100	83.483	Pan_paniscus
ENSRNOG00000037655	Gatb	99	81.115	ENSPPRG00000004993	GATB	99	81.115	Panthera_pardus
ENSRNOG00000037655	Gatb	99	81.115	ENSPTIG00000021433	GATB	99	81.115	Panthera_tigris_altaica
ENSRNOG00000037655	Gatb	100	79.354	ENSPTRG00000016513	GATB	100	79.354	Pan_troglodytes
ENSRNOG00000037655	Gatb	99	80.216	ENSPANG00000024036	GATB	99	80.216	Papio_anubis
ENSRNOG00000037655	Gatb	97	58.595	ENSPKIG00000017076	gatb	96	65.121	Paramormyrops_kingsleyae
ENSRNOG00000037655	Gatb	95	68.037	ENSPSIG00000017832	GATB	98	68.037	Pelodiscus_sinensis
ENSRNOG00000037655	Gatb	89	55.511	ENSPMGG00000016497	gatb	89	55.511	Periophthalmus_magnuspinnatus
ENSRNOG00000037655	Gatb	100	90.485	ENSPEMG00000011096	Gatb	100	90.485	Peromyscus_maniculatus_bairdii
ENSRNOG00000037655	Gatb	99	73.514	ENSPCIG00000015213	GATB	99	73.514	Phascolarctos_cinereus
ENSRNOG00000037655	Gatb	89	65.200	ENSPFOG00000009933	gatb	91	65.200	Poecilia_formosa
ENSRNOG00000037655	Gatb	89	65.795	ENSPLAG00000015569	gatb	94	63.783	Poecilia_latipinna
ENSRNOG00000037655	Gatb	89	64.789	ENSPMEG00000006100	gatb	94	62.777	Poecilia_mexicana
ENSRNOG00000037655	Gatb	89	64.386	ENSPREG00000000128	gatb	94	62.249	Poecilia_reticulata
ENSRNOG00000037655	Gatb	100	83.124	ENSPPYG00000015121	GATB	100	83.124	Pongo_abelii
ENSRNOG00000037655	Gatb	100	63.196	ENSPCAG00000005950	GATB	100	63.196	Procavia_capensis
ENSRNOG00000037655	Gatb	97	84.658	ENSPCOG00000021777	GATB	98	84.658	Propithecus_coquereli
ENSRNOG00000037655	Gatb	99	82.194	ENSPVAG00000006891	GATB	99	82.194	Pteropus_vampyrus
ENSRNOG00000037655	Gatb	95	64.151	ENSPNYG00000013884	gatb	97	64.151	Pundamilia_nyererei
ENSRNOG00000037655	Gatb	88	63.489	ENSPNAG00000020150	gatb	89	63.489	Pygocentrus_nattereri
ENSRNOG00000037655	Gatb	99	82.734	ENSRBIG00000006453	GATB	99	82.734	Rhinopithecus_bieti
ENSRNOG00000037655	Gatb	99	82.734	ENSRROG00000041575	GATB	99	82.734	Rhinopithecus_roxellana
ENSRNOG00000037655	Gatb	85	30.469	YBL080C	-	90	30.469	Saccharomyces_cerevisiae
ENSRNOG00000037655	Gatb	99	82.554	ENSSBOG00000022495	GATB	99	82.554	Saimiri_boliviensis_boliviensis
ENSRNOG00000037655	Gatb	99	72.432	ENSSHAG00000011763	GATB	99	72.432	Sarcophilus_harrisii
ENSRNOG00000037655	Gatb	92	65.631	ENSSFOG00015015565	gatb	93	65.631	Scleropages_formosus
ENSRNOG00000037655	Gatb	98	60.606	ENSSMAG00000003609	gatb	78	60.606	Scophthalmus_maximus
ENSRNOG00000037655	Gatb	90	64.741	ENSSDUG00000019847	gatb	91	64.741	Seriola_dumerili
ENSRNOG00000037655	Gatb	89	65.859	ENSSLDG00000010253	gatb	95	65.859	Seriola_lalandi_dorsalis
ENSRNOG00000037655	Gatb	76	68.955	ENSSARG00000003212	GATB	76	68.955	Sorex_araneus
ENSRNOG00000037655	Gatb	89	72.414	ENSSPUG00000014453	GATB	96	72.414	Sphenodon_punctatus
ENSRNOG00000037655	Gatb	89	66.197	ENSSPAG00000014465	gatb	99	66.197	Stegastes_partitus
ENSRNOG00000037655	Gatb	99	81.115	ENSSSCG00000009015	GATB	99	82.569	Sus_scrofa
ENSRNOG00000037655	Gatb	89	72.672	ENSTGUG00000004986	GATB	99	72.672	Taeniopygia_guttata
ENSRNOG00000037655	Gatb	89	58.974	ENSTRUG00000015238	gatb	92	58.974	Takifugu_rubripes
ENSRNOG00000037655	Gatb	73	61.314	ENSTNIG00000003378	gatb	100	61.314	Tetraodon_nigroviridis
ENSRNOG00000037655	Gatb	77	63.194	ENSTBEG00000009804	GATB	88	63.194	Tupaia_belangeri
ENSRNOG00000037655	Gatb	99	80.755	ENSTTRG00000010679	GATB	99	80.755	Tursiops_truncatus
ENSRNOG00000037655	Gatb	99	83.273	ENSUAMG00000021441	GATB	99	83.273	Ursus_americanus
ENSRNOG00000037655	Gatb	99	82.914	ENSUMAG00000016157	GATB	99	82.914	Ursus_maritimus
ENSRNOG00000037655	Gatb	80	74.627	ENSVPAG00000010844	GATB	80	74.627	Vicugna_pacos
ENSRNOG00000037655	Gatb	99	81.115	ENSVVUG00000025083	GATB	99	81.115	Vulpes_vulpes
ENSRNOG00000037655	Gatb	87	68.994	ENSXETG00000034167	GATB	98	68.826	Xenopus_tropicalis
ENSRNOG00000037655	Gatb	97	59.853	ENSXMAG00000008071	gatb	92	76.074	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	21873635.	IBA	Component
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	-	ISO	Component
GO:0032543	mitochondrial translation	21873635.	IBA	Process
GO:0032543	mitochondrial translation	-	ISO	Process
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	21873635.	IBA	Function
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	-	ISO	Function
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	21873635.	IBA	Process
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	-	ISO	Process