EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000038322 (Gene tree)
Gene ID: -
Gene Symbol: LOC500684
Alias: LOC680519|LOC680829
Full Name: hypothetical protein LOC500684
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 2695 bases
Position: chr6:103932428-103935122
Accession: 1562981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000055154	MA3	PF02847.17	1.4e-19	1	1
ENSRNOP00000055154	MIF4G	PF02854.19	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000058354	-	2622	-	ENSRNOP00000055154	873 (aa)	-	D3ZEL0

Gene Model

Click here to download ENSRNOG00000038322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000038322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000038322	LOC500684	99	97.943	ENSRNOG00000012651	Cwc22	100	97.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000038322	LOC500684	99	79.800	ENSG00000163510	CWC22	98	84.952	Homo_sapiens
ENSRNOG00000038322	LOC500684	63	75.436	ENSAPOG00000004200	cwc22	65	74.567	Acanthochromis_polyacanthus
ENSRNOG00000038322	LOC500684	99	81.486	ENSAMEG00000011004	CWC22	99	81.264	Ailuropoda_melanoleuca
ENSRNOG00000038322	LOC500684	65	78.535	ENSACIG00000020055	cwc22	65	78.374	Amphilophus_citrinellus
ENSRNOG00000038322	LOC500684	64	78.179	ENSAPEG00000002673	cwc22	58	78.547	Amphiprion_percula
ENSRNOG00000038322	LOC500684	65	74.146	ENSATEG00000005176	cwc22	60	74.920	Anabas_testudineus
ENSRNOG00000038322	LOC500684	92	66.826	ENSACAG00000009438	CWC22	99	64.097	Anolis_carolinensis
ENSRNOG00000038322	LOC500684	100	79.601	ENSANAG00000028324	CWC22	99	79.601	Aotus_nancymaae
ENSRNOG00000038322	LOC500684	64	77.530	ENSACLG00000025447	cwc22	82	77.893	Astatotilapia_calliptera
ENSRNOG00000038322	LOC500684	99	79.467	ENSBTAG00000021726	CWC22	99	79.356	Bos_taurus
ENSRNOG00000038322	LOC500684	70	48.056	WBGene00002957	let-858	84	45.063	Caenorhabditis_elegans
ENSRNOG00000038322	LOC500684	99	81.929	ENSCAFG00000014160	CWC22	99	81.818	Canis_familiaris
ENSRNOG00000038322	LOC500684	99	81.477	ENSCAFG00020007223	CWC22	91	92.289	Canis_lupus_dingo
ENSRNOG00000038322	LOC500684	99	79.356	ENSCHIG00000017150	CWC22	99	79.245	Capra_hircus
ENSRNOG00000038322	LOC500684	96	74.823	ENSTSYG00000028686	-	98	74.113	Carlito_syrichta
ENSRNOG00000038322	LOC500684	96	72.558	ENSTSYG00000035591	-	99	70.650	Carlito_syrichta
ENSRNOG00000038322	LOC500684	95	71.277	ENSTSYG00000026635	-	96	70.567	Carlito_syrichta
ENSRNOG00000038322	LOC500684	99	81.375	ENSTSYG00000000218	-	99	81.486	Carlito_syrichta
ENSRNOG00000038322	LOC500684	90	77.301	ENSCAPG00000002064	CWC22	96	77.301	Cavia_aperea
ENSRNOG00000038322	LOC500684	99	80.291	ENSCPOG00000007492	CWC22	99	80.403	Cavia_porcellus
ENSRNOG00000038322	LOC500684	100	76.444	ENSCCAG00000021239	CWC22	99	76.444	Cebus_capucinus
ENSRNOG00000038322	LOC500684	99	81.132	ENSCATG00000035788	CWC22	99	81.021	Cercocebus_atys
ENSRNOG00000038322	LOC500684	99	80.963	ENSCLAG00000011118	CWC22	99	81.187	Chinchilla_lanigera
ENSRNOG00000038322	LOC500684	99	81.000	ENSCSAG00000012925	CWC22	99	80.889	Chlorocebus_sabaeus
ENSRNOG00000038322	LOC500684	88	78.723	ENSCHOG00000006362	CWC22	87	78.875	Choloepus_hoffmanni
ENSRNOG00000038322	LOC500684	96	68.229	ENSCPBG00000001765	CWC22	99	68.931	Chrysemys_picta_bellii
ENSRNOG00000038322	LOC500684	60	64.534	ENSCING00000008865	-	71	65.108	Ciona_intestinalis
ENSRNOG00000038322	LOC500684	61	64.481	ENSCSAVG00000003537	-	76	72.500	Ciona_savignyi
ENSRNOG00000038322	LOC500684	99	80.713	ENSCANG00000013762	CWC22	99	80.713	Colobus_angolensis_palliatus
ENSRNOG00000038322	LOC500684	99	88.444	ENSCGRG00001017005	-	99	89.444	Cricetulus_griseus_chok1gshd
ENSRNOG00000038322	LOC500684	99	88.444	ENSCGRG00000001934	-	99	89.444	Cricetulus_griseus_crigri
ENSRNOG00000038322	LOC500684	61	71.685	ENSCSEG00000005257	cwc22	63	69.085	Cynoglossus_semilaevis
ENSRNOG00000038322	LOC500684	64	77.893	ENSCVAG00000009836	cwc22	79	63.480	Cyprinodon_variegatus
ENSRNOG00000038322	LOC500684	64	77.148	ENSDARG00000014008	cwc22	88	62.723	Danio_rerio
ENSRNOG00000038322	LOC500684	66	69.231	ENSDNOG00000032640	-	88	63.511	Dasypus_novemcinctus
ENSRNOG00000038322	LOC500684	99	81.063	ENSDNOG00000003020	-	99	79.181	Dasypus_novemcinctus
ENSRNOG00000038322	LOC500684	99	80.353	ENSDORG00000011483	-	99	81.236	Dipodomys_ordii
ENSRNOG00000038322	LOC500684	73	77.238	ENSETEG00000013355	CWC22	92	77.238	Echinops_telfairi
ENSRNOG00000038322	LOC500684	99	81.042	ENSEASG00005022287	CWC22	99	81.153	Equus_asinus_asinus
ENSRNOG00000038322	LOC500684	100	80.973	ENSECAG00000010769	CWC22	99	81.375	Equus_caballus
ENSRNOG00000038322	LOC500684	78	86.572	ENSEEUG00000005336	CWC22	77	86.572	Erinaceus_europaeus
ENSRNOG00000038322	LOC500684	92	62.646	ENSELUG00000010536	cwc22	92	73.756	Esox_lucius
ENSRNOG00000038322	LOC500684	99	80.931	ENSFCAG00000018982	CWC22	99	81.153	Felis_catus
ENSRNOG00000038322	LOC500684	94	68.605	ENSFALG00000003495	CWC22	98	66.630	Ficedula_albicollis
ENSRNOG00000038322	LOC500684	99	80.022	ENSFDAG00000010857	CWC22	99	81.033	Fukomys_damarensis
ENSRNOG00000038322	LOC500684	59	81.262	ENSFHEG00000009620	cwc22	62	73.802	Fundulus_heteroclitus
ENSRNOG00000038322	LOC500684	69	73.609	ENSGMOG00000009084	cwc22	93	74.376	Gadus_morhua
ENSRNOG00000038322	LOC500684	99	64.617	ENSGALG00000009001	CWC22	99	65.764	Gallus_gallus
ENSRNOG00000038322	LOC500684	64	76.976	ENSGACG00000002071	cwc22	69	76.644	Gasterosteus_aculeatus
ENSRNOG00000038322	LOC500684	98	68.504	ENSGAGG00000013471	CWC22	99	68.111	Gopherus_agassizii
ENSRNOG00000038322	LOC500684	99	80.022	ENSGGOG00000012484	CWC22	99	80.688	Gorilla_gorilla
ENSRNOG00000038322	LOC500684	63	77.425	ENSHBUG00000010504	cwc22	63	77.599	Haplochromis_burtoni
ENSRNOG00000038322	LOC500684	99	80.089	ENSHGLG00000005692	CWC22	99	80.649	Heterocephalus_glaber_female
ENSRNOG00000038322	LOC500684	99	80.089	ENSHGLG00100016497	CWC22	95	85.045	Heterocephalus_glaber_male
ENSRNOG00000038322	LOC500684	61	79.310	ENSHCOG00000004206	cwc22	68	77.470	Hippocampus_comes
ENSRNOG00000038322	LOC500684	99	82.222	ENSSTOG00000009788	CWC22	99	82.556	Ictidomys_tridecemlineatus
ENSRNOG00000038322	LOC500684	99	81.818	ENSJJAG00000017012	-	99	82.373	Jaculus_jaculus
ENSRNOG00000038322	LOC500684	65	77.778	ENSKMAG00000005228	cwc22	57	77.972	Kryptolebias_marmoratus
ENSRNOG00000038322	LOC500684	64	77.931	ENSLBEG00000020518	cwc22	74	70.625	Labrus_bergylta
ENSRNOG00000038322	LOC500684	91	64.976	ENSLOCG00000006456	cwc22	87	63.963	Lepisosteus_oculatus
ENSRNOG00000038322	LOC500684	99	78.988	ENSLAFG00000014802	CWC22	99	79.098	Loxodonta_africana
ENSRNOG00000038322	LOC500684	99	81.180	ENSMFAG00000000590	CWC22	99	81.403	Macaca_fascicularis
ENSRNOG00000038322	LOC500684	99	76.582	ENSMMUG00000020642	CWC22	99	76.915	Macaca_mulatta
ENSRNOG00000038322	LOC500684	99	81.180	ENSMNEG00000034567	CWC22	99	81.403	Macaca_nemestrina
ENSRNOG00000038322	LOC500684	99	81.354	ENSMLEG00000042344	CWC22	99	81.292	Mandrillus_leucophaeus
ENSRNOG00000038322	LOC500684	68	75.204	ENSMAMG00000018888	cwc22	80	63.033	Mastacembelus_armatus
ENSRNOG00000038322	LOC500684	64	78.216	ENSMZEG00005021449	cwc22	63	73.323	Maylandia_zebra
ENSRNOG00000038322	LOC500684	95	66.705	ENSMGAG00000009220	CWC22	100	66.593	Meleagris_gallopavo
ENSRNOG00000038322	LOC500684	79	85.180	ENSMAUG00000016154	-	95	85.180	Mesocricetus_auratus
ENSRNOG00000038322	LOC500684	100	81.596	ENSMICG00000016919	CWC22	99	81.596	Microcebus_murinus
ENSRNOG00000038322	LOC500684	67	70.164	ENSMMOG00000019720	cwc22	89	69.375	Mola_mola
ENSRNOG00000038322	LOC500684	61	81.903	ENSMODG00000020117	-	100	81.716	Monodelphis_domestica
ENSRNOG00000038322	LOC500684	99	71.951	ENSMODG00000010233	-	99	72.506	Monodelphis_domestica
ENSRNOG00000038322	LOC500684	61	81.835	ENSMODG00000003711	-	100	81.648	Monodelphis_domestica
ENSRNOG00000038322	LOC500684	100	90.211	MGP_CAROLIEiJ_G0023696	-	99	90.656	Mus_caroli
ENSRNOG00000038322	LOC500684	90	87.470	ENSMUSG00000094125	Gm13698	99	88.200	Mus_musculus
ENSRNOG00000038322	LOC500684	90	87.470	ENSMUSG00000096484	Gm13696	99	88.200	Mus_musculus
ENSRNOG00000038322	LOC500684	100	90.177	ENSMUSG00000027014	Cwc22	99	90.000	Mus_musculus
ENSRNOG00000038322	LOC500684	90	87.470	ENSMUSG00000095824	Gm13697	99	88.200	Mus_musculus
ENSRNOG00000038322	LOC500684	90	87.470	ENSMUSG00000094336	Gm13693	99	88.200	Mus_musculus
ENSRNOG00000038322	LOC500684	90	87.470	ENSMUSG00000079247	Gm13691	99	88.200	Mus_musculus
ENSRNOG00000038322	LOC500684	90	87.470	ENSMUSG00000096337	Gm13694	99	88.200	Mus_musculus
ENSRNOG00000038322	LOC500684	90	87.348	ENSMUSG00000096729	Gm13695	99	88.078	Mus_musculus
ENSRNOG00000038322	LOC500684	100	91.000	MGP_PahariEiJ_G0025147	-	99	91.556	Mus_pahari
ENSRNOG00000038322	LOC500684	99	80.466	ENSMPUG00000002432	CWC22	99	82.131	Mustela_putorius_furo
ENSRNOG00000038322	LOC500684	89	81.188	ENSMLUG00000013437	-	98	80.751	Myotis_lucifugus
ENSRNOG00000038322	LOC500684	85	81.070	ENSMLUG00000024966	-	96	82.376	Myotis_lucifugus
ENSRNOG00000038322	LOC500684	99	73.976	ENSNGAG00000013881	-	96	87.833	Nannospalax_galili
ENSRNOG00000038322	LOC500684	99	80.799	ENSNLEG00000006248	CWC22	99	80.799	Nomascus_leucogenys
ENSRNOG00000038322	LOC500684	62	79.218	ENSMEUG00000011026	CWC22	99	79.422	Notamacropus_eugenii
ENSRNOG00000038322	LOC500684	74	80.775	ENSOPRG00000007844	CWC22	83	82.229	Ochotona_princeps
ENSRNOG00000038322	LOC500684	57	90.402	ENSODEG00000005934	-	81	89.845	Octodon_degus
ENSRNOG00000038322	LOC500684	62	88.109	ENSODEG00000007673	CWC22	92	87.645	Octodon_degus
ENSRNOG00000038322	LOC500684	96	71.086	ENSOANG00000008649	CWC22	100	73.177	Ornithorhynchus_anatinus
ENSRNOG00000038322	LOC500684	66	75.707	ENSORLG00000010538	cwc22	60	80.035	Oryzias_latipes
ENSRNOG00000038322	LOC500684	66	75.707	ENSORLG00020015117	cwc22	60	80.035	Oryzias_latipes_hni
ENSRNOG00000038322	LOC500684	67	75.248	ENSORLG00015018073	cwc22	60	80.035	Oryzias_latipes_hsok
ENSRNOG00000038322	LOC500684	64	78.103	ENSOMEG00000015199	cwc22	58	82.288	Oryzias_melastigma
ENSRNOG00000038322	LOC500684	99	80.820	ENSOGAG00000015287	CWC22	99	80.820	Otolemur_garnettii
ENSRNOG00000038322	LOC500684	99	79.245	ENSOARG00000016905	CWC22	99	79.134	Ovis_aries
ENSRNOG00000038322	LOC500684	99	80.401	ENSPPAG00000027833	CWC22	99	80.512	Pan_paniscus
ENSRNOG00000038322	LOC500684	99	81.042	ENSPPRG00000001389	CWC22	99	81.264	Panthera_pardus
ENSRNOG00000038322	LOC500684	99	81.153	ENSPTIG00000019139	CWC22	99	81.375	Panthera_tigris_altaica
ENSRNOG00000038322	LOC500684	99	80.688	ENSPTRG00000012698	CWC22	99	80.799	Pan_troglodytes
ENSRNOG00000038322	LOC500684	99	81.354	ENSPANG00000018976	CWC22	99	81.292	Papio_anubis
ENSRNOG00000038322	LOC500684	97	61.954	ENSPKIG00000021346	cwc22	68	75.085	Paramormyrops_kingsleyae
ENSRNOG00000038322	LOC500684	98	69.032	ENSPSIG00000008632	CWC22	99	68.812	Pelodiscus_sinensis
ENSRNOG00000038322	LOC500684	99	77.352	ENSPEMG00000023936	-	99	77.158	Peromyscus_maniculatus_bairdii
ENSRNOG00000038322	LOC500684	91	64.241	ENSPMAG00000005914	cwc22	96	61.882	Petromyzon_marinus
ENSRNOG00000038322	LOC500684	99	73.497	ENSPCIG00000009903	-	100	75.532	Phascolarctos_cinereus
ENSRNOG00000038322	LOC500684	61	80.901	ENSPFOG00000015025	cwc22	87	71.729	Poecilia_formosa
ENSRNOG00000038322	LOC500684	61	81.455	ENSPLAG00000021405	cwc22	78	63.525	Poecilia_latipinna
ENSRNOG00000038322	LOC500684	61	80.901	ENSPMEG00000007850	cwc22	61	74.199	Poecilia_mexicana
ENSRNOG00000038322	LOC500684	61	81.319	ENSPREG00000004312	cwc22	67	78.049	Poecilia_reticulata
ENSRNOG00000038322	LOC500684	99	80.133	ENSPPYG00000012986	CWC22	99	80.799	Pongo_abelii
ENSRNOG00000038322	LOC500684	99	77.951	ENSPCAG00000011882	CWC22	99	78.420	Procavia_capensis
ENSRNOG00000038322	LOC500684	92	86.559	ENSPCOG00000010195	CWC22	99	67.406	Propithecus_coquereli
ENSRNOG00000038322	LOC500684	99	79.000	ENSPVAG00000011497	CWC22	99	80.333	Pteropus_vampyrus
ENSRNOG00000038322	LOC500684	64	74.614	ENSPNYG00000010435	cwc22	82	74.957	Pundamilia_nyererei
ENSRNOG00000038322	LOC500684	99	76.648	ENSRBIG00000036751	CWC22	99	76.360	Rhinopithecus_bieti
ENSRNOG00000038322	LOC500684	99	80.889	ENSRROG00000037520	CWC22	99	80.825	Rhinopithecus_roxellana
ENSRNOG00000038322	LOC500684	100	80.385	ENSSBOG00000021683	CWC22	99	80.272	Saimiri_boliviensis_boliviensis
ENSRNOG00000038322	LOC500684	97	73.295	ENSSHAG00000016596	-	99	73.295	Sarcophilus_harrisii
ENSRNOG00000038322	LOC500684	72	68.923	ENSSHAG00000004040	-	88	67.846	Sarcophilus_harrisii
ENSRNOG00000038322	LOC500684	55	80.855	ENSSFOG00015010559	cwc22	62	78.320	Scleropages_formosus
ENSRNOG00000038322	LOC500684	64	74.742	ENSSMAG00000004724	cwc22	65	70.122	Scophthalmus_maximus
ENSRNOG00000038322	LOC500684	65	77.342	ENSSDUG00000010656	cwc22	61	74.516	Seriola_dumerili
ENSRNOG00000038322	LOC500684	62	78.292	ENSSLDG00000023157	cwc22	84	77.607	Seriola_lalandi_dorsalis
ENSRNOG00000038322	LOC500684	66	98.295	ENSSARG00000013596	-	64	98.295	Sorex_araneus
ENSRNOG00000038322	LOC500684	97	64.645	ENSSPUG00000006395	CWC22	99	66.247	Sphenodon_punctatus
ENSRNOG00000038322	LOC500684	64	78.179	ENSSPAG00000008746	cwc22	62	74.760	Stegastes_partitus
ENSRNOG00000038322	LOC500684	99	80.288	ENSSSCG00000016008	CWC22	99	80.177	Sus_scrofa
ENSRNOG00000038322	LOC500684	97	68.151	ENSTGUG00000009340	-	99	67.200	Taeniopygia_guttata
ENSRNOG00000038322	LOC500684	67	74.384	ENSTRUG00000014411	cwc22	65	73.376	Takifugu_rubripes
ENSRNOG00000038322	LOC500684	59	76.812	ENSTNIG00000005074	cwc22	77	73.639	Tetraodon_nigroviridis
ENSRNOG00000038322	LOC500684	96	66.205	ENSTBEG00000014539	CWC22	95	66.090	Tupaia_belangeri
ENSRNOG00000038322	LOC500684	99	79.111	ENSTTRG00000012142	CWC22	99	79.444	Tursiops_truncatus
ENSRNOG00000038322	LOC500684	99	81.271	ENSUAMG00000010342	CWC22	99	81.063	Ursus_americanus
ENSRNOG00000038322	LOC500684	99	81.486	ENSUMAG00000016730	CWC22	99	81.264	Ursus_maritimus
ENSRNOG00000038322	LOC500684	73	88.754	ENSVPAG00000008565	CWC22	72	88.906	Vicugna_pacos
ENSRNOG00000038322	LOC500684	100	81.527	ENSVVUG00000009738	CWC22	99	81.416	Vulpes_vulpes
ENSRNOG00000038322	LOC500684	82	71.429	ENSXETG00000014099	cwc22	84	76.154	Xenopus_tropicalis
ENSRNOG00000038322	LOC500684	61	80.000	ENSXMAG00000013201	cwc22	62	73.726	Xiphophorus_maculatus