EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000038366 (Gene tree)
Gene ID: 310348
Gene Symbol: Larp1b
Alias: LOC310348|RGD1307509
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 31760 bases
Position: chr2:127845034-127876793
Accession: 1307509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000040850	La	PF05383.17	4.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000044804	-	3319	-	ENSRNOP00000040850	335 (aa)	-	Q66HE8

Gene Model

Click here to download ENSRNOG00000038366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000038366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000038366	Larp1b	100	89.851	ENSG00000138709	LARP1B	100	89.851	Homo_sapiens
ENSRNOG00000038366	Larp1b	100	92.239	ENSAMEG00000002748	LARP1B	100	92.239	Ailuropoda_melanoleuca
ENSRNOG00000038366	Larp1b	99	78.852	ENSANAG00000034618	LARP1B	96	78.550	Aotus_nancymaae
ENSRNOG00000038366	Larp1b	98	89.394	ENSBTAG00000012135	LARP1B	63	89.394	Bos_taurus
ENSRNOG00000038366	Larp1b	100	92.239	ENSCJAG00000003338	LARP1B	100	92.239	Callithrix_jacchus
ENSRNOG00000038366	Larp1b	100	91.642	ENSCAFG00020018899	LARP1B	100	91.642	Canis_lupus_dingo
ENSRNOG00000038366	Larp1b	100	88.690	ENSCHIG00000023144	LARP1B	100	88.690	Capra_hircus
ENSRNOG00000038366	Larp1b	98	86.322	ENSTSYG00000002037	-	93	86.322	Carlito_syrichta
ENSRNOG00000038366	Larp1b	76	94.643	ENSCPOG00000034668	-	93	94.643	Cavia_porcellus
ENSRNOG00000038366	Larp1b	99	91.617	ENSCCAG00000021948	LARP1B	99	91.617	Cebus_capucinus
ENSRNOG00000038366	Larp1b	100	87.463	ENSCATG00000013541	LARP1B	100	87.463	Cercocebus_atys
ENSRNOG00000038366	Larp1b	100	86.866	ENSCLAG00000006448	-	100	86.866	Chinchilla_lanigera
ENSRNOG00000038366	Larp1b	100	77.910	ENSCANG00000026958	LARP1B	100	77.910	Colobus_angolensis_palliatus
ENSRNOG00000038366	Larp1b	100	97.612	ENSCGRG00001004660	-	100	97.612	Cricetulus_griseus_chok1gshd
ENSRNOG00000038366	Larp1b	100	97.313	ENSCGRG00000001914	-	100	97.313	Cricetulus_griseus_crigri
ENSRNOG00000038366	Larp1b	98	90.881	ENSDNOG00000018765	-	64	90.881	Dasypus_novemcinctus
ENSRNOG00000038366	Larp1b	99	91.317	ENSEASG00005018106	LARP1B	99	91.317	Equus_asinus_asinus
ENSRNOG00000038366	Larp1b	100	91.642	ENSFCAG00000014650	-	100	91.642	Felis_catus
ENSRNOG00000038366	Larp1b	100	89.851	ENSGGOG00000015900	LARP1B	100	89.851	Gorilla_gorilla
ENSRNOG00000038366	Larp1b	100	86.431	ENSHGLG00000006728	-	99	86.726	Heterocephalus_glaber_female
ENSRNOG00000038366	Larp1b	98	75.076	ENSHGLG00000013922	-	96	73.556	Heterocephalus_glaber_female
ENSRNOG00000038366	Larp1b	98	75.076	ENSHGLG00100016491	-	96	73.556	Heterocephalus_glaber_male
ENSRNOG00000038366	Larp1b	100	87.164	ENSHGLG00100014041	-	96	87.164	Heterocephalus_glaber_male
ENSRNOG00000038366	Larp1b	91	66.013	ENSSTOG00000033183	-	96	65.320	Ictidomys_tridecemlineatus
ENSRNOG00000038366	Larp1b	100	91.369	ENSSTOG00000008596	-	100	91.369	Ictidomys_tridecemlineatus
ENSRNOG00000038366	Larp1b	99	83.082	ENSSTOG00000021917	-	94	82.477	Ictidomys_tridecemlineatus
ENSRNOG00000038366	Larp1b	96	73.520	ENSSTOG00000034510	-	87	73.520	Ictidomys_tridecemlineatus
ENSRNOG00000038366	Larp1b	99	91.018	ENSJJAG00000022360	Larp1b	99	91.018	Jaculus_jaculus
ENSRNOG00000038366	Larp1b	98	71.601	ENSLACG00000015247	LARP1B	85	69.880	Latimeria_chalumnae
ENSRNOG00000038366	Larp1b	99	93.155	ENSLAFG00000008473	-	99	93.155	Loxodonta_africana
ENSRNOG00000038366	Larp1b	100	91.045	ENSMFAG00000002218	LARP1B	100	91.045	Macaca_fascicularis
ENSRNOG00000038366	Larp1b	69	88.276	ENSMFAG00000003306	-	93	88.276	Macaca_fascicularis
ENSRNOG00000038366	Larp1b	100	91.045	ENSMMUG00000021347	LARP1B	100	91.045	Macaca_mulatta
ENSRNOG00000038366	Larp1b	65	88.811	ENSMNEG00000027747	-	89	88.811	Macaca_nemestrina
ENSRNOG00000038366	Larp1b	77	55.556	ENSMZEG00005002545	larp1b	54	55.926	Maylandia_zebra
ENSRNOG00000038366	Larp1b	100	96.716	ENSMAUG00000007879	-	100	96.716	Mesocricetus_auratus
ENSRNOG00000038366	Larp1b	100	94.030	ENSMICG00000036111	LARP1B	100	94.030	Microcebus_murinus
ENSRNOG00000038366	Larp1b	97	69.632	ENSMICG00000028052	-	63	69.632	Microcebus_murinus
ENSRNOG00000038366	Larp1b	98	77.644	ENSMICG00000037883	-	90	77.341	Microcebus_murinus
ENSRNOG00000038366	Larp1b	79	98.479	ENSMOCG00000001490	Larp1b	95	98.479	Microtus_ochrogaster
ENSRNOG00000038366	Larp1b	100	96.418	MGP_CAROLIEiJ_G0024962	Larp1b	100	96.418	Mus_caroli
ENSRNOG00000038366	Larp1b	100	97.313	ENSMUSG00000025762	Larp1b	100	97.313	Mus_musculus
ENSRNOG00000038366	Larp1b	100	97.015	MGP_PahariEiJ_G0026403	Larp1b	100	97.015	Mus_pahari
ENSRNOG00000038366	Larp1b	100	97.313	MGP_SPRETEiJ_G0025897	Larp1b	100	97.313	Mus_spretus
ENSRNOG00000038366	Larp1b	100	90.149	ENSNLEG00000013819	LARP1B	100	90.149	Nomascus_leucogenys
ENSRNOG00000038366	Larp1b	100	86.567	ENSODEG00000001292	-	100	86.567	Octodon_degus
ENSRNOG00000038366	Larp1b	100	89.552	ENSPPAG00000030439	LARP1B	100	89.552	Pan_paniscus
ENSRNOG00000038366	Larp1b	100	91.642	ENSPPRG00000002743	-	100	91.642	Panthera_pardus
ENSRNOG00000038366	Larp1b	100	91.642	ENSPTIG00000011225	LARP1B	100	91.642	Panthera_tigris_altaica
ENSRNOG00000038366	Larp1b	100	89.851	ENSPTRG00000016437	LARP1B	100	89.851	Pan_troglodytes
ENSRNOG00000038366	Larp1b	100	90.746	ENSPANG00000012488	LARP1B	100	90.746	Papio_anubis
ENSRNOG00000038366	Larp1b	99	86.269	ENSPCIG00000026516	LARP1B	87	86.970	Phascolarctos_cinereus
ENSRNOG00000038366	Larp1b	99	52.044	ENSPFOG00000022837	-	52	51.771	Poecilia_formosa
ENSRNOG00000038366	Larp1b	79	56.738	ENSPREG00000005955	-	89	56.338	Poecilia_reticulata
ENSRNOG00000038366	Larp1b	100	93.433	ENSPCOG00000021874	LARP1B	100	93.433	Propithecus_coquereli
ENSRNOG00000038366	Larp1b	100	88.657	ENSRBIG00000039982	-	100	87.463	Rhinopithecus_bieti
ENSRNOG00000038366	Larp1b	100	81.493	ENSRBIG00000038568	-	92	81.493	Rhinopithecus_bieti
ENSRNOG00000038366	Larp1b	100	72.537	ENSRROG00000038525	-	96	72.537	Rhinopithecus_roxellana
ENSRNOG00000038366	Larp1b	100	91.045	ENSRROG00000030771	LARP1B	100	91.045	Rhinopithecus_roxellana
ENSRNOG00000038366	Larp1b	98	89.970	ENSSSCG00000034280	LARP1B	63	89.970	Sus_scrofa
ENSRNOG00000038366	Larp1b	73	57.202	ENSSSCG00000040491	-	99	77.778	Sus_scrofa
ENSRNOG00000038366	Larp1b	100	82.090	ENSUAMG00000016938	-	100	81.548	Ursus_americanus
ENSRNOG00000038366	Larp1b	98	91.489	ENSVVUG00000011307	LARP1B	65	91.489	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function