EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000039500 (Gene tree)
Gene ID: 497194
Gene Symbol: Rnase13
Alias: -
Full Name: ribonuclease A family member 13
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 462 bases
Position: chr15:28323046-28323507
Accession: 1359386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000057279	RnaseA	PF00074.20	1.1e-27	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000060539	-	462	XM_006251896	ENSRNOP00000057279	153 (aa)	XP_006251958	R9PY04

Gene Model

Click here to download ENSRNOG00000039500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000039500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000039500	Rnase13	100	70.588	ENSG00000206150	RNASE13	88	72.263	Homo_sapiens
ENSRNOG00000039500	Rnase13	100	70.588	ENSAMEG00000020056	RNASE13	100	70.588	Ailuropoda_melanoleuca
ENSRNOG00000039500	Rnase13	100	68.627	ENSBTAG00000046189	RNASE13	100	68.627	Bos_taurus
ENSRNOG00000039500	Rnase13	100	69.935	ENSCAFG00000024269	RNASE13	100	69.935	Canis_familiaris
ENSRNOG00000039500	Rnase13	100	69.935	ENSCAFG00020014438	RNASE13	100	69.935	Canis_lupus_dingo
ENSRNOG00000039500	Rnase13	100	70.588	ENSCHIG00000006567	RNASE13	100	70.588	Capra_hircus
ENSRNOG00000039500	Rnase13	90	56.934	ENSCAPG00000002872	RNASE13	87	56.934	Cavia_aperea
ENSRNOG00000039500	Rnase13	90	56.934	ENSCPOG00000019970	RNASE13	87	56.934	Cavia_porcellus
ENSRNOG00000039500	Rnase13	100	50.980	ENSCLAG00000001669	RNASE13	98	50.980	Chinchilla_lanigera
ENSRNOG00000039500	Rnase13	100	64.706	ENSCSAG00000000343	RNASE13	88	66.423	Chlorocebus_sabaeus
ENSRNOG00000039500	Rnase13	100	84.967	ENSCGRG00001015473	Rnase13	100	84.967	Cricetulus_griseus_chok1gshd
ENSRNOG00000039500	Rnase13	100	84.967	ENSCGRG00000019768	Rnase13	100	84.967	Cricetulus_griseus_crigri
ENSRNOG00000039500	Rnase13	99	64.474	ENSDNOG00000036572	RNASE13	99	64.474	Dasypus_novemcinctus
ENSRNOG00000039500	Rnase13	90	79.562	ENSDORG00000008166	Rnase13	90	79.562	Dipodomys_ordii
ENSRNOG00000039500	Rnase13	99	57.237	ENSETEG00000015416	RNASE13	87	57.353	Echinops_telfairi
ENSRNOG00000039500	Rnase13	83	68.504	ENSEASG00005010379	RNASE13	84	69.048	Equus_asinus_asinus
ENSRNOG00000039500	Rnase13	83	67.717	ENSECAG00000031881	RNASE13	84	68.254	Equus_caballus
ENSRNOG00000039500	Rnase13	100	58.824	ENSEEUG00000010845	RNASE13	90	59.854	Erinaceus_europaeus
ENSRNOG00000039500	Rnase13	99	58.553	ENSFDAG00000002192	RNASE13	99	58.553	Fukomys_damarensis
ENSRNOG00000039500	Rnase13	99	55.921	ENSHGLG00000020365	RNASE13	99	55.921	Heterocephalus_glaber_female
ENSRNOG00000039500	Rnase13	99	55.921	ENSHGLG00100019656	RNASE13	99	55.921	Heterocephalus_glaber_male
ENSRNOG00000039500	Rnase13	100	58.824	ENSSTOG00000003861	RNASE13	98	58.824	Ictidomys_tridecemlineatus
ENSRNOG00000039500	Rnase13	100	64.052	ENSLAFG00000007087	RNASE13	100	64.052	Loxodonta_africana
ENSRNOG00000039500	Rnase13	100	81.699	ENSMAUG00000019685	Rnase13	90	84.672	Mesocricetus_auratus
ENSRNOG00000039500	Rnase13	100	81.046	ENSMOCG00000003092	Rnase13	100	81.046	Microtus_ochrogaster
ENSRNOG00000039500	Rnase13	95	50.340	ENSMODG00000005200	-	82	52.800	Monodelphis_domestica
ENSRNOG00000039500	Rnase13	100	90.196	MGP_CAROLIEiJ_G0019230	Rnase13	100	90.196	Mus_caroli
ENSRNOG00000039500	Rnase13	100	90.850	ENSMUSG00000068392	Rnase13	100	90.850	Mus_musculus
ENSRNOG00000039500	Rnase13	100	90.850	MGP_PahariEiJ_G0030251	Rnase13	100	90.850	Mus_pahari
ENSRNOG00000039500	Rnase13	100	90.850	MGP_SPRETEiJ_G0020121	Rnase13	100	90.850	Mus_spretus
ENSRNOG00000039500	Rnase13	100	70.588	ENSMLUG00000014600	RNASE13	100	70.588	Myotis_lucifugus
ENSRNOG00000039500	Rnase13	81	58.871	ENSNGAG00000016564	Rnase13	86	59.259	Nannospalax_galili
ENSRNOG00000039500	Rnase13	100	61.438	ENSOPRG00000004856	RNASE13	99	61.438	Ochotona_princeps
ENSRNOG00000039500	Rnase13	95	39.456	ENSOANG00000002977	-	81	40.458	Ornithorhynchus_anatinus
ENSRNOG00000039500	Rnase13	100	64.706	ENSOCUG00000007105	RNASE13	100	64.706	Oryctolagus_cuniculus
ENSRNOG00000039500	Rnase13	100	63.399	ENSOGAG00000033773	-	100	63.399	Otolemur_garnettii
ENSRNOG00000039500	Rnase13	100	63.399	ENSOGAG00000033468	-	100	63.399	Otolemur_garnettii
ENSRNOG00000039500	Rnase13	100	70.588	ENSOARG00000019696	RNASE13	100	70.588	Ovis_aries
ENSRNOG00000039500	Rnase13	100	83.660	ENSPEMG00000006492	Rnase13	100	83.660	Peromyscus_maniculatus_bairdii
ENSRNOG00000039500	Rnase13	95	49.315	ENSPCIG00000028748	-	90	48.905	Phascolarctos_cinereus
ENSRNOG00000039500	Rnase13	100	68.627	ENSPPYG00000005586	RNASE13	88	70.073	Pongo_abelii
ENSRNOG00000039500	Rnase13	100	60.131	ENSPCAG00000014093	RNASE13	88	61.314	Procavia_capensis
ENSRNOG00000039500	Rnase13	90	62.319	ENSPVAG00000001617	RNASE13	99	62.745	Pteropus_vampyrus
ENSRNOG00000039500	Rnase13	96	48.980	ENSSHAG00000001684	-	82	50.000	Sarcophilus_harrisii
ENSRNOG00000039500	Rnase13	100	71.895	ENSSSCG00000023519	RNASE13	90	73.723	Sus_scrofa
ENSRNOG00000039500	Rnase13	100	69.935	ENSTBEG00000013798	RNASE13	99	69.935	Tupaia_belangeri
ENSRNOG00000039500	Rnase13	100	70.588	ENSUAMG00000011123	RNASE13	100	70.588	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004540	ribonuclease activity	21873635.	IBA	Function
GO:0004540	ribonuclease activity	15676279.	IKR	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0090501	RNA phosphodiester bond hydrolysis	-	IEA	Process