EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000039567 (Gene tree)
Gene ID: 304012
Gene Symbol: Trmt10c
Alias: LOC304012|MGC94708|Rg9mtd1
Full Name: tRNA methyltransferase 10C%2C mitochondrial RNase P subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5077 bases
Position: chr11:47047342-47052418
Accession: 1306333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000002198	tRNA_m1G_MT	PF01746.21	4.1e-42	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000002198	-	2621	-	ENSRNOP00000002198	414 (aa)	-	Q5U2R4

Gene Model

Click here to download ENSRNOG00000039567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000039567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000039567	Trmt10c	96	75.439	ENSG00000174173	TRMT10C	99	75.439	Homo_sapiens
ENSRNOG00000039567	Trmt10c	52	59.070	ENSAPOG00000003883	trmt10c	62	59.070	Acanthochromis_polyacanthus
ENSRNOG00000039567	Trmt10c	98	74.752	ENSAMEG00000019657	TRMT10C	98	74.752	Ailuropoda_melanoleuca
ENSRNOG00000039567	Trmt10c	51	59.242	ENSAOCG00000005855	trmt10c	64	58.182	Amphiprion_ocellaris
ENSRNOG00000039567	Trmt10c	61	30.038	ENSAPEG00000003675	trmt10b	63	32.161	Amphiprion_percula
ENSRNOG00000039567	Trmt10c	51	59.716	ENSAPEG00000021992	trmt10c	64	58.636	Amphiprion_percula
ENSRNOG00000039567	Trmt10c	91	50.000	ENSATEG00000012576	trmt10c	96	48.705	Anabas_testudineus
ENSRNOG00000039567	Trmt10c	81	53.274	ENSAPLG00000011561	TRMT10C	84	53.274	Anas_platyrhynchos
ENSRNOG00000039567	Trmt10c	81	54.971	ENSACAG00000011903	TRMT10C	78	54.971	Anolis_carolinensis
ENSRNOG00000039567	Trmt10c	97	45.036	ENSACLG00000024269	trmt10c	97	45.036	Astatotilapia_calliptera
ENSRNOG00000039567	Trmt10c	81	50.440	ENSAMXG00000014749	trmt10c	81	49.853	Astyanax_mexicanus
ENSRNOG00000039567	Trmt10c	99	73.723	ENSBTAG00000024027	TRMT10C	98	73.723	Bos_taurus
ENSRNOG00000039567	Trmt10c	100	69.398	ENSCAFG00000031607	TRMT10C	98	69.398	Canis_familiaris
ENSRNOG00000039567	Trmt10c	100	69.398	ENSCAFG00020008862	TRMT10C	98	69.398	Canis_lupus_dingo
ENSRNOG00000039567	Trmt10c	99	73.723	ENSCHIG00000021446	TRMT10C	96	73.723	Capra_hircus
ENSRNOG00000039567	Trmt10c	99	73.284	ENSCLAG00000017738	TRMT10C	96	73.284	Chinchilla_lanigera
ENSRNOG00000039567	Trmt10c	96	77.193	ENSCSAG00000018722	TRMT10C	99	77.193	Chlorocebus_sabaeus
ENSRNOG00000039567	Trmt10c	92	74.607	ENSCHOG00000010108	TRMT10C	98	75.131	Choloepus_hoffmanni
ENSRNOG00000039567	Trmt10c	100	77.590	ENSCGRG00001006603	Trmt10c	100	77.590	Cricetulus_griseus_chok1gshd
ENSRNOG00000039567	Trmt10c	100	77.590	ENSCGRG00000019728	Trmt10c	100	77.590	Cricetulus_griseus_crigri
ENSRNOG00000039567	Trmt10c	88	45.052	ENSCSEG00000006163	trmt10c	77	44.041	Cynoglossus_semilaevis
ENSRNOG00000039567	Trmt10c	81	49.861	ENSCVAG00000013751	trmt10c	71	47.619	Cyprinodon_variegatus
ENSRNOG00000039567	Trmt10c	50	32.093	ENSCVAG00000014204	trmt10b	64	31.944	Cyprinodon_variegatus
ENSRNOG00000039567	Trmt10c	84	48.889	ENSDARG00000041575	trmt10c	87	47.222	Danio_rerio
ENSRNOG00000039567	Trmt10c	100	69.565	ENSDNOG00000012650	TRMT10C	99	69.565	Dasypus_novemcinctus
ENSRNOG00000039567	Trmt10c	99	74.328	ENSDORG00000027529	Trmt10c	100	73.671	Dipodomys_ordii
ENSRNOG00000039567	Trmt10c	77	36.364	ENSEBUG00000015332	trmt10c	75	35.737	Eptatretus_burgeri
ENSRNOG00000039567	Trmt10c	100	77.349	ENSEASG00005011186	TRMT10C	99	77.349	Equus_asinus_asinus
ENSRNOG00000039567	Trmt10c	100	77.349	ENSECAG00000001533	TRMT10C	99	77.349	Equus_caballus
ENSRNOG00000039567	Trmt10c	96	68.080	ENSEEUG00000004696	TRMT10C	99	65.337	Erinaceus_europaeus
ENSRNOG00000039567	Trmt10c	85	52.235	ENSELUG00000002553	trmt10c	85	52.235	Esox_lucius
ENSRNOG00000039567	Trmt10c	98	74.265	ENSFCAG00000003430	TRMT10C	96	74.265	Felis_catus
ENSRNOG00000039567	Trmt10c	86	52.514	ENSFALG00000014236	TRMT10C	85	52.198	Ficedula_albicollis
ENSRNOG00000039567	Trmt10c	100	70.983	ENSFDAG00000001576	TRMT10C	95	72.127	Fukomys_damarensis
ENSRNOG00000039567	Trmt10c	80	50.418	ENSFHEG00000015379	trmt10c	71	49.304	Fundulus_heteroclitus
ENSRNOG00000039567	Trmt10c	79	49.697	ENSGMOG00000008573	trmt10c	95	47.576	Gadus_morhua
ENSRNOG00000039567	Trmt10c	88	50.135	ENSGALG00000015328	TRMT10C	89	50.135	Gallus_gallus
ENSRNOG00000039567	Trmt10c	52	59.908	ENSGAFG00000012256	trmt10c	69	59.908	Gambusia_affinis
ENSRNOG00000039567	Trmt10c	92	48.454	ENSGACG00000015281	trmt10c	95	47.423	Gasterosteus_aculeatus
ENSRNOG00000039567	Trmt10c	93	51.908	ENSGAGG00000022825	TRMT10C	92	52.284	Gopherus_agassizii
ENSRNOG00000039567	Trmt10c	96	75.188	ENSGGOG00000006484	TRMT10C	99	75.188	Gorilla_gorilla
ENSRNOG00000039567	Trmt10c	50	57.212	ENSHBUG00000000010	trmt10c	67	55.251	Haplochromis_burtoni
ENSRNOG00000039567	Trmt10c	98	71.078	ENSHGLG00000019767	TRMT10C	98	69.608	Heterocephalus_glaber_female
ENSRNOG00000039567	Trmt10c	98	71.078	ENSHGLG00100020191	TRMT10C	98	69.608	Heterocephalus_glaber_male
ENSRNOG00000039567	Trmt10c	51	57.944	ENSHCOG00000003493	trmt10c	78	57.944	Hippocampus_comes
ENSRNOG00000039567	Trmt10c	81	50.829	ENSIPUG00000010010	trmt10c	74	48.901	Ictalurus_punctatus
ENSRNOG00000039567	Trmt10c	98	76.658	ENSSTOG00000012199	TRMT10C	97	76.658	Ictidomys_tridecemlineatus
ENSRNOG00000039567	Trmt10c	81	49.855	ENSKMAG00000022027	trmt10c	80	49.565	Kryptolebias_marmoratus
ENSRNOG00000039567	Trmt10c	87	45.855	ENSLBEG00000013143	trmt10c	78	45.855	Labrus_bergylta
ENSRNOG00000039567	Trmt10c	84	52.825	ENSLACG00000002036	TRMT10C	93	50.843	Latimeria_chalumnae
ENSRNOG00000039567	Trmt10c	85	50.135	ENSLOCG00000017802	trmt10c	83	47.978	Lepisosteus_oculatus
ENSRNOG00000039567	Trmt10c	100	74.699	ENSLAFG00000009677	TRMT10C	100	74.699	Loxodonta_africana
ENSRNOG00000039567	Trmt10c	99	78.049	ENSMMUG00000017780	TRMT10C	98	77.349	Macaca_mulatta
ENSRNOG00000039567	Trmt10c	52	56.422	ENSMAMG00000003124	trmt10c	65	56.422	Mastacembelus_armatus
ENSRNOG00000039567	Trmt10c	51	56.398	ENSMZEG00005000671	trmt10c	66	55.251	Maylandia_zebra
ENSRNOG00000039567	Trmt10c	55	55.652	ENSMGAG00000014375	TRMT10C	84	57.407	Meleagris_gallopavo
ENSRNOG00000039567	Trmt10c	100	81.159	ENSMAUG00000009904	Trmt10c	100	81.159	Mesocricetus_auratus
ENSRNOG00000039567	Trmt10c	100	80.723	ENSMOCG00000020572	Trmt10c	100	80.723	Microtus_ochrogaster
ENSRNOG00000039567	Trmt10c	50	57.971	ENSMMOG00000018106	trmt10c	61	57.971	Mola_mola
ENSRNOG00000039567	Trmt10c	99	54.916	ENSMODG00000025175	TRMT10C	98	54.916	Monodelphis_domestica
ENSRNOG00000039567	Trmt10c	86	46.997	ENSMALG00000016236	trmt10c	71	48.870	Monopterus_albus
ENSRNOG00000039567	Trmt10c	100	90.097	MGP_CAROLIEiJ_G0020812	Trmt10c	100	90.097	Mus_caroli
ENSRNOG00000039567	Trmt10c	100	90.097	ENSMUSG00000044763	Trmt10c	100	90.097	Mus_musculus
ENSRNOG00000039567	Trmt10c	100	87.681	MGP_PahariEiJ_G0016512	Trmt10c	100	87.681	Mus_pahari
ENSRNOG00000039567	Trmt10c	100	90.338	MGP_SPRETEiJ_G0021712	Trmt10c	100	90.338	Mus_spretus
ENSRNOG00000039567	Trmt10c	98	74.201	ENSMPUG00000019979	TRMT10C	96	74.201	Mustela_putorius_furo
ENSRNOG00000039567	Trmt10c	99	72.794	ENSMLUG00000030097	-	98	72.794	Myotis_lucifugus
ENSRNOG00000039567	Trmt10c	99	73.284	ENSMLUG00000028638	-	100	72.464	Myotis_lucifugus
ENSRNOG00000039567	Trmt10c	100	77.590	ENSNGAG00000022215	Trmt10c	100	77.590	Nannospalax_galili
ENSRNOG00000039567	Trmt10c	50	57.692	ENSNBRG00000017903	trmt10c	84	55.708	Neolamprologus_brichardi
ENSRNOG00000039567	Trmt10c	96	75.940	ENSOPRG00000007388	TRMT10C	99	75.940	Ochotona_princeps
ENSRNOG00000039567	Trmt10c	79	50.448	ENSONIG00000003128	trmt10c	89	50.448	Oreochromis_niloticus
ENSRNOG00000039567	Trmt10c	89	53.476	ENSOANG00000007508	TRMT10C	100	54.813	Ornithorhynchus_anatinus
ENSRNOG00000039567	Trmt10c	99	73.659	ENSOCUG00000011103	TRMT10C	96	73.659	Oryctolagus_cuniculus
ENSRNOG00000039567	Trmt10c	80	50.281	ENSORLG00000004992	trmt10c	70	50.281	Oryzias_latipes
ENSRNOG00000039567	Trmt10c	80	49.719	ENSORLG00020016083	trmt10c	70	50.281	Oryzias_latipes_hni
ENSRNOG00000039567	Trmt10c	80	49.157	ENSORLG00015014590	trmt10c	70	49.719	Oryzias_latipes_hsok
ENSRNOG00000039567	Trmt10c	64	50.376	ENSOMEG00000016820	trmt10c	87	52.610	Oryzias_melastigma
ENSRNOG00000039567	Trmt10c	100	72.356	ENSOGAG00000001819	TRMT10C	100	71.807	Otolemur_garnettii
ENSRNOG00000039567	Trmt10c	99	74.453	ENSOARG00000001677	TRMT10C	97	74.453	Ovis_aries
ENSRNOG00000039567	Trmt10c	99	74.328	ENSPTIG00000002271	TRMT10C	97	74.328	Panthera_tigris_altaica
ENSRNOG00000039567	Trmt10c	96	75.188	ENSPTRG00000051763	-	99	75.188	Pan_troglodytes
ENSRNOG00000039567	Trmt10c	96	75.188	ENSPTRG00000015171	TRMT10C	99	75.188	Pan_troglodytes
ENSRNOG00000039567	Trmt10c	80	52.312	ENSPKIG00000010307	trmt10c	74	51.754	Paramormyrops_kingsleyae
ENSRNOG00000039567	Trmt10c	80	59.091	ENSPSIG00000004052	TRMT10C	81	58.610	Pelodiscus_sinensis
ENSRNOG00000039567	Trmt10c	51	54.930	ENSPMGG00000001599	trmt10c	74	54.930	Periophthalmus_magnuspinnatus
ENSRNOG00000039567	Trmt10c	100	84.783	ENSPEMG00000006986	Trmt10c	100	84.783	Peromyscus_maniculatus_bairdii
ENSRNOG00000039567	Trmt10c	99	56.010	ENSPCIG00000016080	TRMT10C	98	56.010	Phascolarctos_cinereus
ENSRNOG00000039567	Trmt10c	79	51.917	ENSPFOG00000009282	trmt10c	83	50.440	Poecilia_formosa
ENSRNOG00000039567	Trmt10c	54	54.545	ENSPLAG00000010774	trmt10c	77	56.808	Poecilia_latipinna
ENSRNOG00000039567	Trmt10c	51	57.277	ENSPMEG00000023060	trmt10c	75	57.277	Poecilia_mexicana
ENSRNOG00000039567	Trmt10c	80	49.304	ENSPREG00000021808	trmt10c	71	49.025	Poecilia_reticulata
ENSRNOG00000039567	Trmt10c	99	75.182	ENSPPYG00000013592	TRMT10C	96	75.182	Pongo_abelii
ENSRNOG00000039567	Trmt10c	96	72.362	ENSPCAG00000001290	TRMT10C	99	72.362	Procavia_capensis
ENSRNOG00000039567	Trmt10c	96	74.874	ENSPVAG00000009885	TRMT10C	99	74.874	Pteropus_vampyrus
ENSRNOG00000039567	Trmt10c	85	48.468	ENSPNYG00000003607	trmt10c	82	48.468	Pundamilia_nyererei
ENSRNOG00000039567	Trmt10c	50	62.802	ENSPNAG00000010519	trmt10c	66	62.802	Pygocentrus_nattereri
ENSRNOG00000039567	Trmt10c	93	75.130	ENSSBOG00000023326	TRMT10C	100	75.130	Saimiri_boliviensis_boliviensis
ENSRNOG00000039567	Trmt10c	99	54.327	ENSSHAG00000008854	TRMT10C	97	54.327	Sarcophilus_harrisii
ENSRNOG00000039567	Trmt10c	79	52.770	ENSSFOG00015008704	trmt10c	77	52.478	Scleropages_formosus
ENSRNOG00000039567	Trmt10c	79	48.844	ENSSMAG00000021322	trmt10c	67	50.737	Scophthalmus_maximus
ENSRNOG00000039567	Trmt10c	80	49.003	ENSSDUG00000006430	trmt10c	82	45.363	Seriola_dumerili
ENSRNOG00000039567	Trmt10c	59	52.439	ENSSLDG00000001023	trmt10c	68	57.534	Seriola_lalandi_dorsalis
ENSRNOG00000039567	Trmt10c	51	30.415	ENSSLDG00000006011	trmt10b	64	30.542	Seriola_lalandi_dorsalis
ENSRNOG00000039567	Trmt10c	96	74.185	ENSSARG00000014342	TRMT10C	99	74.185	Sorex_araneus
ENSRNOG00000039567	Trmt10c	87	51.515	ENSSPUG00000018495	TRMT10C	87	51.515	Sphenodon_punctatus
ENSRNOG00000039567	Trmt10c	61	30.303	ENSSPAG00000004689	trmt10b	63	32.500	Stegastes_partitus
ENSRNOG00000039567	Trmt10c	76	52.366	ENSSPAG00000016082	trmt10c	80	52.366	Stegastes_partitus
ENSRNOG00000039567	Trmt10c	99	75.306	ENSSSCG00000011956	TRMT10C	99	75.306	Sus_scrofa
ENSRNOG00000039567	Trmt10c	81	54.627	ENSTGUG00000013621	TRMT10C	100	54.627	Taeniopygia_guttata
ENSRNOG00000039567	Trmt10c	67	52.632	ENSTRUG00000024252	trmt10c	85	49.123	Takifugu_rubripes
ENSRNOG00000039567	Trmt10c	80	50.442	ENSTNIG00000009440	trmt10c	90	49.263	Tetraodon_nigroviridis
ENSRNOG00000039567	Trmt10c	96	76.441	ENSTBEG00000013894	TRMT10C	99	76.441	Tupaia_belangeri
ENSRNOG00000039567	Trmt10c	95	76.456	ENSTTRG00000015004	TRMT10C	98	76.456	Tursiops_truncatus
ENSRNOG00000039567	Trmt10c	98	75.556	ENSUAMG00000017378	TRMT10C	98	75.556	Ursus_americanus
ENSRNOG00000039567	Trmt10c	98	75.556	ENSUMAG00000003252	TRMT10C	98	75.556	Ursus_maritimus
ENSRNOG00000039567	Trmt10c	100	71.256	ENSVVUG00000021735	TRMT10C	94	71.256	Vulpes_vulpes
ENSRNOG00000039567	Trmt10c	80	53.916	ENSXETG00000029921	trmt10c	82	63.084	Xenopus_tropicalis
ENSRNOG00000039567	Trmt10c	61	30.418	ENSXCOG00000009025	trmt10b	62	32.843	Xiphophorus_couchianus
ENSRNOG00000039567	Trmt10c	66	52.817	ENSXCOG00000002876	trmt10c	92	52.465	Xiphophorus_couchianus
ENSRNOG00000039567	Trmt10c	79	50.282	ENSXMAG00000019205	trmt10c	70	50.282	Xiphophorus_maculatus
ENSRNOG00000039567	Trmt10c	61	30.682	ENSXMAG00000001869	trmt10b	60	33.168	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0000049	tRNA binding	-	ISO	Function
GO:0000049	tRNA binding	-	ISS	Function
GO:0000964	mitochondrial RNA 5'-end processing	-	ISO	Process
GO:0000964	mitochondrial RNA 5'-end processing	-	ISS	Process
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	-	ISO	Function
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	-	ISO	Function
GO:0030488	tRNA methylation	-	IEA	Process
GO:0030678	mitochondrial ribonuclease P complex	21873635.	IBA	Component
GO:0042645	mitochondrial nucleoid	-	IEA	Component
GO:0052905	tRNA (guanine(9)-N(1))-methyltransferase activity	-	IEA	Function
GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	21873635.	IBA	Function
GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	-	ISO	Function
GO:0061953	mRNA (adenine-N1-)-methyltransferase activity	-	ISS	Function
GO:0070131	positive regulation of mitochondrial translation	21873635.	IBA	Process
GO:0070131	positive regulation of mitochondrial translation	-	ISO	Process
GO:0070131	positive regulation of mitochondrial translation	-	ISS	Process
GO:0080009	mRNA methylation	-	ISO	Process
GO:0080009	mRNA methylation	-	ISS	Process
GO:0090646	mitochondrial tRNA processing	21873635.	IBA	Process
GO:0090646	mitochondrial tRNA processing	-	ISO	Process
GO:0090646	mitochondrial tRNA processing	-	ISS	Process
GO:0097745	mitochondrial tRNA 5'-end processing	-	ISO	Process
GO:0097745	mitochondrial tRNA 5'-end processing	-	ISS	Process
GO:1990180	mitochondrial tRNA 3'-end processing	21873635.	IBA	Process
GO:1990180	mitochondrial tRNA 3'-end processing	-	ISO	Process