EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000040281 (Gene tree)
Gene ID: 685928
Gene Symbol: Zc3h10
Alias: LOC685928
Full Name: zinc finger CCCH type containing 10
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4087 bases
Position: chr7:2968435-2972521
Accession: 1587846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000058705	zf-CCCH	PF00642.24	6.2e-12	1	2
ENSRNOP00000058705	zf-CCCH	PF00642.24	6.2e-12	2	2
ENSRNOP00000058705	zf-CCCH_2	PF14608.6	6.8e-09	1	3
ENSRNOP00000058705	zf-CCCH_2	PF14608.6	6.8e-09	2	3
ENSRNOP00000058705	zf-CCCH_2	PF14608.6	6.8e-09	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000061995	-	2075	XM_008765041	ENSRNOP00000058705	435 (aa)	XP_008763263	D3ZLM7

Gene Model

Click here to download ENSRNOG00000040281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000040281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000040281	Zc3h10	100	96.322	ENSG00000135482	ZC3H10	100	96.322	Homo_sapiens
ENSRNOG00000040281	Zc3h10	83	76.389	ENSAPOG00000013862	zc3h10	86	47.303	Acanthochromis_polyacanthus
ENSRNOG00000040281	Zc3h10	100	96.322	ENSAMEG00000019365	ZC3H10	100	96.322	Ailuropoda_melanoleuca
ENSRNOG00000040281	Zc3h10	82	75.926	ENSACIG00000022311	zc3h10	86	47.412	Amphilophus_citrinellus
ENSRNOG00000040281	Zc3h10	83	76.389	ENSAOCG00000021782	zc3h10	86	47.035	Amphiprion_ocellaris
ENSRNOG00000040281	Zc3h10	83	76.389	ENSAPEG00000010972	zc3h10	86	47.035	Amphiprion_percula
ENSRNOG00000040281	Zc3h10	82	75.926	ENSATEG00000024754	zc3h10	86	45.885	Anabas_testudineus
ENSRNOG00000040281	Zc3h10	100	73.394	ENSACAG00000005020	ZC3H10	95	78.589	Anolis_carolinensis
ENSRNOG00000040281	Zc3h10	100	96.092	ENSANAG00000004774	ZC3H10	100	96.092	Aotus_nancymaae
ENSRNOG00000040281	Zc3h10	82	77.344	ENSACLG00000001913	zc3h10	91	65.190	Astatotilapia_calliptera
ENSRNOG00000040281	Zc3h10	85	72.222	ENSAMXG00000000266	zc3h10	60	77.519	Astyanax_mexicanus
ENSRNOG00000040281	Zc3h10	100	95.862	ENSBTAG00000009542	ZC3H10	100	95.862	Bos_taurus
ENSRNOG00000040281	Zc3h10	100	96.552	ENSCJAG00000045638	ZC3H10	100	96.552	Callithrix_jacchus
ENSRNOG00000040281	Zc3h10	100	95.862	ENSCAFG00000000104	ZC3H10	100	95.862	Canis_familiaris
ENSRNOG00000040281	Zc3h10	100	95.862	ENSCAFG00020025996	ZC3H10	100	95.862	Canis_lupus_dingo
ENSRNOG00000040281	Zc3h10	100	96.092	ENSCHIG00000003359	ZC3H10	100	96.092	Capra_hircus
ENSRNOG00000040281	Zc3h10	100	97.011	ENSTSYG00000014379	ZC3H10	100	97.011	Carlito_syrichta
ENSRNOG00000040281	Zc3h10	92	95.238	ENSCAPG00000002936	ZC3H10	100	95.238	Cavia_aperea
ENSRNOG00000040281	Zc3h10	100	95.862	ENSCPOG00000032639	ZC3H10	100	95.862	Cavia_porcellus
ENSRNOG00000040281	Zc3h10	100	95.172	ENSCCAG00000020214	-	100	94.943	Cebus_capucinus
ENSRNOG00000040281	Zc3h10	100	96.552	ENSCATG00000012691	ZC3H10	100	96.552	Cercocebus_atys
ENSRNOG00000040281	Zc3h10	100	96.552	ENSCLAG00000011346	ZC3H10	100	96.552	Chinchilla_lanigera
ENSRNOG00000040281	Zc3h10	100	96.552	ENSCSAG00000018893	ZC3H10	100	96.552	Chlorocebus_sabaeus
ENSRNOG00000040281	Zc3h10	100	73.103	ENSCPBG00000012828	ZC3H10	100	73.333	Chrysemys_picta_bellii
ENSRNOG00000040281	Zc3h10	100	96.552	ENSCANG00000007357	ZC3H10	100	96.552	Colobus_angolensis_palliatus
ENSRNOG00000040281	Zc3h10	100	97.471	ENSCGRG00001004310	Zc3h10	100	97.471	Cricetulus_griseus_chok1gshd
ENSRNOG00000040281	Zc3h10	100	97.471	ENSCGRG00000015981	Zc3h10	100	97.471	Cricetulus_griseus_crigri
ENSRNOG00000040281	Zc3h10	91	72.603	ENSCSEG00000003687	zc3h10	67	77.315	Cynoglossus_semilaevis
ENSRNOG00000040281	Zc3h10	89	76.190	ENSCVAG00000001548	zc3h10	86	46.960	Cyprinodon_variegatus
ENSRNOG00000040281	Zc3h10	83	75.735	ENSDARG00000030335	zc3h10	89	74.453	Danio_rerio
ENSRNOG00000040281	Zc3h10	100	96.552	ENSDNOG00000040571	ZC3H10	100	96.552	Dasypus_novemcinctus
ENSRNOG00000040281	Zc3h10	100	95.402	ENSDORG00000001081	Zc3h10	100	95.402	Dipodomys_ordii
ENSRNOG00000040281	Zc3h10	100	96.322	ENSEASG00005003533	ZC3H10	100	96.322	Equus_asinus_asinus
ENSRNOG00000040281	Zc3h10	100	96.552	ENSECAG00000013003	ZC3H10	100	96.552	Equus_caballus
ENSRNOG00000040281	Zc3h10	100	96.322	ENSFDAG00000012558	ZC3H10	100	96.322	Fukomys_damarensis
ENSRNOG00000040281	Zc3h10	89	75.000	ENSFHEG00000021836	zc3h10	94	65.584	Fundulus_heteroclitus
ENSRNOG00000040281	Zc3h10	100	72.477	ENSGALG00000037941	ZC3H10	100	73.394	Gallus_gallus
ENSRNOG00000040281	Zc3h10	89	75.781	ENSGAFG00000002137	zc3h10	81	46.960	Gambusia_affinis
ENSRNOG00000040281	Zc3h10	88	77.778	ENSGACG00000000638	zc3h10	90	66.584	Gasterosteus_aculeatus
ENSRNOG00000040281	Zc3h10	100	73.333	ENSGAGG00000020590	ZC3H10	100	73.563	Gopherus_agassizii
ENSRNOG00000040281	Zc3h10	100	96.092	ENSGGOG00000039636	ZC3H10	100	96.092	Gorilla_gorilla
ENSRNOG00000040281	Zc3h10	100	96.322	ENSHGLG00000015956	ZC3H10	100	96.322	Heterocephalus_glaber_female
ENSRNOG00000040281	Zc3h10	100	96.322	ENSHGLG00100013005	ZC3H10	100	96.322	Heterocephalus_glaber_male
ENSRNOG00000040281	Zc3h10	83	74.419	ENSHCOG00000020331	zc3h10	87	46.170	Hippocampus_comes
ENSRNOG00000040281	Zc3h10	91	59.081	ENSIPUG00000001697	zc3h10	85	75.194	Ictalurus_punctatus
ENSRNOG00000040281	Zc3h10	100	96.552	ENSSTOG00000007753	ZC3H10	100	96.552	Ictidomys_tridecemlineatus
ENSRNOG00000040281	Zc3h10	100	95.862	ENSJJAG00000001726	Zc3h10	100	95.862	Jaculus_jaculus
ENSRNOG00000040281	Zc3h10	89	76.744	ENSKMAG00000017905	zc3h10	85	46.764	Kryptolebias_marmoratus
ENSRNOG00000040281	Zc3h10	79	78.125	ENSLBEG00000018281	zc3h10	85	42.062	Labrus_bergylta
ENSRNOG00000040281	Zc3h10	100	65.148	ENSLACG00000002390	ZC3H10	100	64.009	Latimeria_chalumnae
ENSRNOG00000040281	Zc3h10	100	95.402	ENSLAFG00000014817	ZC3H10	100	95.402	Loxodonta_africana
ENSRNOG00000040281	Zc3h10	100	96.552	ENSMFAG00000027256	ZC3H10	100	96.552	Macaca_fascicularis
ENSRNOG00000040281	Zc3h10	100	96.552	ENSMMUG00000021084	ZC3H10	100	96.552	Macaca_mulatta
ENSRNOG00000040281	Zc3h10	100	96.552	ENSMNEG00000025282	ZC3H10	100	96.552	Macaca_nemestrina
ENSRNOG00000040281	Zc3h10	100	96.552	ENSMLEG00000027930	ZC3H10	100	96.552	Mandrillus_leucophaeus
ENSRNOG00000040281	Zc3h10	79	76.984	ENSMAMG00000003284	zc3h10	61	77.315	Mastacembelus_armatus
ENSRNOG00000040281	Zc3h10	100	97.241	ENSMAUG00000008505	Zc3h10	100	97.241	Mesocricetus_auratus
ENSRNOG00000040281	Zc3h10	100	96.782	ENSMOCG00000019869	Zc3h10	100	96.782	Microtus_ochrogaster
ENSRNOG00000040281	Zc3h10	83	75.373	ENSMMOG00000021874	zc3h10	86	48.033	Mola_mola
ENSRNOG00000040281	Zc3h10	85	76.498	ENSMALG00000016443	zc3h10	85	46.694	Monopterus_albus
ENSRNOG00000040281	Zc3h10	100	99.080	MGP_CAROLIEiJ_G0015942	Zc3h10	100	99.080	Mus_caroli
ENSRNOG00000040281	Zc3h10	100	98.851	ENSMUSG00000039810	Zc3h10	100	98.851	Mus_musculus
ENSRNOG00000040281	Zc3h10	100	98.851	MGP_PahariEiJ_G0031142	Zc3h10	100	98.851	Mus_pahari
ENSRNOG00000040281	Zc3h10	100	98.391	MGP_SPRETEiJ_G0016767	Zc3h10	100	98.391	Mus_spretus
ENSRNOG00000040281	Zc3h10	100	95.862	ENSMPUG00000018496	ZC3H10	100	95.862	Mustela_putorius_furo
ENSRNOG00000040281	Zc3h10	100	91.724	ENSMLUG00000006564	ZC3H10	100	91.954	Myotis_lucifugus
ENSRNOG00000040281	Zc3h10	100	97.011	ENSNGAG00000011848	Zc3h10	100	97.011	Nannospalax_galili
ENSRNOG00000040281	Zc3h10	79	77.344	ENSNBRG00000020931	zc3h10	91	65.190	Neolamprologus_brichardi
ENSRNOG00000040281	Zc3h10	100	86.499	ENSMEUG00000001222	ZC3H10	100	87.872	Notamacropus_eugenii
ENSRNOG00000040281	Zc3h10	100	96.322	ENSODEG00000007942	ZC3H10	100	96.322	Octodon_degus
ENSRNOG00000040281	Zc3h10	100	65.924	ENSONIG00000019154	zc3h10	90	67.076	Oreochromis_niloticus
ENSRNOG00000040281	Zc3h10	100	94.954	ENSOCUG00000017349	ZC3H10	100	94.954	Oryctolagus_cuniculus
ENSRNOG00000040281	Zc3h10	89	72.609	ENSORLG00000014596	zc3h10	87	46.555	Oryzias_latipes
ENSRNOG00000040281	Zc3h10	89	72.174	ENSORLG00020000559	zc3h10	87	46.347	Oryzias_latipes_hni
ENSRNOG00000040281	Zc3h10	97	45.776	ENSORLG00015014077	zc3h10	87	46.555	Oryzias_latipes_hsok
ENSRNOG00000040281	Zc3h10	90	72.174	ENSOMEG00000023135	zc3h10	87	46.764	Oryzias_melastigma
ENSRNOG00000040281	Zc3h10	100	94.943	ENSOGAG00000030676	ZC3H10	100	91.954	Otolemur_garnettii
ENSRNOG00000040281	Zc3h10	100	93.103	ENSOARG00000010330	ZC3H10	100	93.103	Ovis_aries
ENSRNOG00000040281	Zc3h10	100	96.322	ENSPPAG00000023790	ZC3H10	100	96.322	Pan_paniscus
ENSRNOG00000040281	Zc3h10	100	96.092	ENSPTIG00000006237	ZC3H10	100	96.092	Panthera_tigris_altaica
ENSRNOG00000040281	Zc3h10	100	96.322	ENSPTRG00000005078	ZC3H10	100	96.322	Pan_troglodytes
ENSRNOG00000040281	Zc3h10	100	96.552	ENSPANG00000029620	ZC3H10	100	96.552	Papio_anubis
ENSRNOG00000040281	Zc3h10	88	72.174	ENSPKIG00000007158	zc3h10	84	47.314	Paramormyrops_kingsleyae
ENSRNOG00000040281	Zc3h10	86	70.430	ENSPSIG00000000811	ZC3H10	87	69.892	Pelodiscus_sinensis
ENSRNOG00000040281	Zc3h10	100	65.708	ENSPMGG00000010570	zc3h10	92	64.320	Periophthalmus_magnuspinnatus
ENSRNOG00000040281	Zc3h10	100	97.241	ENSPEMG00000008278	Zc3h10	100	97.241	Peromyscus_maniculatus_bairdii
ENSRNOG00000040281	Zc3h10	100	85.388	ENSPCIG00000007018	ZC3H10	100	87.671	Phascolarctos_cinereus
ENSRNOG00000040281	Zc3h10	89	75.000	ENSPFOG00000006164	zc3h10	85	46.598	Poecilia_formosa
ENSRNOG00000040281	Zc3h10	89	75.000	ENSPLAG00000001248	zc3h10	85	46.598	Poecilia_latipinna
ENSRNOG00000040281	Zc3h10	89	75.000	ENSPMEG00000002660	zc3h10	85	46.998	Poecilia_mexicana
ENSRNOG00000040281	Zc3h10	89	75.000	ENSPREG00000015323	zc3h10	85	75.000	Poecilia_reticulata
ENSRNOG00000040281	Zc3h10	100	76.552	ENSPPYG00000004644	ZC3H10	100	76.092	Pongo_abelii
ENSRNOG00000040281	Zc3h10	100	95.172	ENSPCAG00000005636	ZC3H10	100	95.172	Procavia_capensis
ENSRNOG00000040281	Zc3h10	100	94.943	ENSPCOG00000012389	ZC3H10	100	94.943	Propithecus_coquereli
ENSRNOG00000040281	Zc3h10	100	95.172	ENSPVAG00000007566	ZC3H10	100	95.172	Pteropus_vampyrus
ENSRNOG00000040281	Zc3h10	79	77.344	ENSPNYG00000021193	zc3h10	91	65.190	Pundamilia_nyererei
ENSRNOG00000040281	Zc3h10	76	79.703	ENSPNAG00000013796	zc3h10	57	77.500	Pygocentrus_nattereri
ENSRNOG00000040281	Zc3h10	100	96.322	ENSRBIG00000019615	ZC3H10	100	96.322	Rhinopithecus_bieti
ENSRNOG00000040281	Zc3h10	100	96.322	ENSRROG00000013225	ZC3H10	100	96.322	Rhinopithecus_roxellana
ENSRNOG00000040281	Zc3h10	100	96.552	ENSSBOG00000019876	ZC3H10	100	96.552	Saimiri_boliviensis_boliviensis
ENSRNOG00000040281	Zc3h10	100	85.812	ENSSHAG00000005568	ZC3H10	100	87.185	Sarcophilus_harrisii
ENSRNOG00000040281	Zc3h10	79	79.365	ENSSFOG00015015320	zc3h10	84	47.239	Scleropages_formosus
ENSRNOG00000040281	Zc3h10	79	75.781	ENSSMAG00000003388	zc3h10	87	45.585	Scophthalmus_maximus
ENSRNOG00000040281	Zc3h10	82	76.562	ENSSDUG00000006067	zc3h10	86	47.423	Seriola_dumerili
ENSRNOG00000040281	Zc3h10	82	76.562	ENSSLDG00000002721	zc3h10	86	47.423	Seriola_lalandi_dorsalis
ENSRNOG00000040281	Zc3h10	73	98.649	ENSSARG00000007208	ZC3H10	73	98.649	Sorex_araneus
ENSRNOG00000040281	Zc3h10	100	71.494	ENSSPUG00000014715	ZC3H10	94	76.574	Sphenodon_punctatus
ENSRNOG00000040281	Zc3h10	83	76.389	ENSSPAG00000001210	zc3h10	61	77.344	Stegastes_partitus
ENSRNOG00000040281	Zc3h10	100	96.322	ENSSSCG00000033568	ZC3H10	100	96.322	Sus_scrofa
ENSRNOG00000040281	Zc3h10	88	75.969	ENSTRUG00000009733	zc3h10	86	47.490	Takifugu_rubripes
ENSRNOG00000040281	Zc3h10	91	67.391	ENSTNIG00000014558	zc3h10	95	67.150	Tetraodon_nigroviridis
ENSRNOG00000040281	Zc3h10	100	95.632	ENSTTRG00000016415	ZC3H10	100	95.632	Tursiops_truncatus
ENSRNOG00000040281	Zc3h10	100	91.285	ENSUAMG00000010526	ZC3H10	100	91.285	Ursus_americanus
ENSRNOG00000040281	Zc3h10	100	96.322	ENSUMAG00000016780	ZC3H10	100	96.322	Ursus_maritimus
ENSRNOG00000040281	Zc3h10	100	96.092	ENSVPAG00000009524	ZC3H10	100	96.092	Vicugna_pacos
ENSRNOG00000040281	Zc3h10	100	95.862	ENSVVUG00000021999	ZC3H10	100	95.862	Vulpes_vulpes
ENSRNOG00000040281	Zc3h10	94	63.364	ENSXETG00000009476	zc3h10	95	64.200	Xenopus_tropicalis
ENSRNOG00000040281	Zc3h10	87	75.781	ENSXCOG00000018650	zc3h10	85	75.781	Xiphophorus_couchianus
ENSRNOG00000040281	Zc3h10	89	75.781	ENSXMAG00000002294	zc3h10	85	75.781	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0010608	posttranscriptional regulation of gene expression	-	IEA	Process
GO:0010608	posttranscriptional regulation of gene expression	-	ISO	Process
GO:0035198	miRNA binding	-	IEA	Function
GO:0035198	miRNA binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:1903799	negative regulation of production of miRNAs involved in gene silencing by miRNA	-	IEA	Process
GO:1903799	negative regulation of production of miRNAs involved in gene silencing by miRNA	-	ISO	Process