EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000042355 (Gene tree)
Gene ID: 363006
Gene Symbol: Tarbp2
Alias: LOC363006|MGC124970
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5114 bases
Position: chr7:144121744-144126857
Accession: 1307375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000061329	dsrm	PF00035.26	3.3e-34	1	2
ENSRNOP00000061329	dsrm	PF00035.26	3.3e-34	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000064661	-	1469	XM_006242428	ENSRNOP00000061329	365 (aa)	XP_006242490	Q3SWU0

Gene Model

Click here to download ENSRNOG00000042355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000042355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000042355	Tarbp2	96	42.898	ENSRNOG00000011195	Prkra	94	43.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000042355	Tarbp2	100	92.896	ENSG00000139546	TARBP2	99	100.000	Homo_sapiens
ENSRNOG00000042355	Tarbp2	100	64.658	ENSAPOG00000019892	tarbp2	100	65.205	Acanthochromis_polyacanthus
ENSRNOG00000042355	Tarbp2	100	90.984	ENSAMEG00000012601	TARBP2	100	90.984	Ailuropoda_melanoleuca
ENSRNOG00000042355	Tarbp2	100	63.562	ENSACIG00000016780	tarbp2	100	64.384	Amphilophus_citrinellus
ENSRNOG00000042355	Tarbp2	100	64.658	ENSAOCG00000005201	tarbp2	100	65.205	Amphiprion_ocellaris
ENSRNOG00000042355	Tarbp2	100	64.658	ENSAPEG00000008376	tarbp2	100	65.205	Amphiprion_percula
ENSRNOG00000042355	Tarbp2	100	63.288	ENSATEG00000025012	tarbp2	100	64.932	Anabas_testudineus
ENSRNOG00000042355	Tarbp2	95	75.284	ENSACAG00000001100	TARBP2	95	73.276	Anolis_carolinensis
ENSRNOG00000042355	Tarbp2	100	92.077	ENSANAG00000034453	TARBP2	100	92.077	Aotus_nancymaae
ENSRNOG00000042355	Tarbp2	95	66.092	ENSACLG00000018569	tarbp2	95	66.092	Astatotilapia_calliptera
ENSRNOG00000042355	Tarbp2	99	64.481	ENSAMXG00000016665	tarbp2	99	64.481	Astyanax_mexicanus
ENSRNOG00000042355	Tarbp2	100	91.257	ENSBTAG00000000435	TARBP2	100	91.257	Bos_taurus
ENSRNOG00000042355	Tarbp2	100	92.077	ENSCJAG00000018668	TARBP2	100	92.077	Callithrix_jacchus
ENSRNOG00000042355	Tarbp2	100	91.803	ENSCAFG00000006874	TARBP2	100	90.437	Canis_familiaris
ENSRNOG00000042355	Tarbp2	100	92.896	ENSCAFG00020020735	TARBP2	100	91.594	Canis_lupus_dingo
ENSRNOG00000042355	Tarbp2	100	90.000	ENSCHIG00000026017	TARBP2	100	90.270	Capra_hircus
ENSRNOG00000042355	Tarbp2	100	92.623	ENSTSYG00000035683	TARBP2	100	91.803	Carlito_syrichta
ENSRNOG00000042355	Tarbp2	62	91.556	ENSCAPG00000008981	TARBP2	100	91.556	Cavia_aperea
ENSRNOG00000042355	Tarbp2	100	90.437	ENSCPOG00000001009	TARBP2	100	89.344	Cavia_porcellus
ENSRNOG00000042355	Tarbp2	100	91.530	ENSCCAG00000033025	TARBP2	100	91.530	Cebus_capucinus
ENSRNOG00000042355	Tarbp2	100	92.623	ENSCATG00000026344	TARBP2	100	91.803	Cercocebus_atys
ENSRNOG00000042355	Tarbp2	100	91.257	ENSCLAG00000009175	TARBP2	100	90.164	Chinchilla_lanigera
ENSRNOG00000042355	Tarbp2	100	92.350	ENSCSAG00000005479	TARBP2	100	91.530	Chlorocebus_sabaeus
ENSRNOG00000042355	Tarbp2	100	73.297	ENSCPBG00000000654	TARBP2	100	73.837	Chrysemys_picta_bellii
ENSRNOG00000042355	Tarbp2	100	91.803	ENSCANG00000040415	TARBP2	100	90.984	Colobus_angolensis_palliatus
ENSRNOG00000042355	Tarbp2	100	96.438	ENSCGRG00001011856	TARBP2	100	96.438	Cricetulus_griseus_chok1gshd
ENSRNOG00000042355	Tarbp2	100	96.438	ENSCGRG00000009088	TARBP2	100	97.942	Cricetulus_griseus_crigri
ENSRNOG00000042355	Tarbp2	100	65.574	ENSCSEG00000010631	tarbp2	100	65.753	Cynoglossus_semilaevis
ENSRNOG00000042355	Tarbp2	100	65.312	ENSCVAG00000009832	tarbp2	100	64.932	Cyprinodon_variegatus
ENSRNOG00000042355	Tarbp2	100	64.658	ENSDARG00000070471	tarbp2	100	65.205	Danio_rerio
ENSRNOG00000042355	Tarbp2	100	92.350	ENSDNOG00000002144	TARBP2	100	91.530	Dasypus_novemcinctus
ENSRNOG00000042355	Tarbp2	87	92.982	ENSDORG00000001390	Tarbp2	100	92.982	Dipodomys_ordii
ENSRNOG00000042355	Tarbp2	100	76.776	ENSETEG00000002458	TARBP2	84	95.283	Echinops_telfairi
ENSRNOG00000042355	Tarbp2	95	54.885	ENSEBUG00000002377	tarbp2	96	56.305	Eptatretus_burgeri
ENSRNOG00000042355	Tarbp2	100	93.443	ENSEASG00005010030	TARBP2	100	92.077	Equus_asinus_asinus
ENSRNOG00000042355	Tarbp2	100	93.169	ENSECAG00000011695	TARBP2	100	92.077	Equus_caballus
ENSRNOG00000042355	Tarbp2	85	83.974	ENSEEUG00000001128	-	99	83.333	Erinaceus_europaeus
ENSRNOG00000042355	Tarbp2	96	66.667	ENSELUG00000010642	tarbp2	96	66.382	Esox_lucius
ENSRNOG00000042355	Tarbp2	100	92.350	ENSFCAG00000007757	TARBP2	100	90.710	Felis_catus
ENSRNOG00000042355	Tarbp2	100	91.257	ENSFDAG00000011932	TARBP2	100	90.984	Fukomys_damarensis
ENSRNOG00000042355	Tarbp2	94	66.570	ENSFHEG00000016118	tarbp2	100	66.570	Fundulus_heteroclitus
ENSRNOG00000042355	Tarbp2	100	64.033	ENSGMOG00000001290	tarbp2	100	64.402	Gadus_morhua
ENSRNOG00000042355	Tarbp2	61	71.300	ENSGALG00000038939	-	83	71.300	Gallus_gallus
ENSRNOG00000042355	Tarbp2	100	65.753	ENSGAFG00000013341	tarbp2	100	65.205	Gambusia_affinis
ENSRNOG00000042355	Tarbp2	100	62.670	ENSGACG00000006645	tarbp2	100	64.033	Gasterosteus_aculeatus
ENSRNOG00000042355	Tarbp2	100	73.297	ENSGAGG00000021169	TARBP2	100	72.603	Gopherus_agassizii
ENSRNOG00000042355	Tarbp2	100	92.623	ENSGGOG00000012637	TARBP2	100	91.803	Gorilla_gorilla
ENSRNOG00000042355	Tarbp2	100	64.110	ENSHBUG00000018639	tarbp2	100	64.110	Haplochromis_burtoni
ENSRNOG00000042355	Tarbp2	100	91.257	ENSHGLG00000001284	TARBP2	100	90.164	Heterocephalus_glaber_female
ENSRNOG00000042355	Tarbp2	100	91.257	ENSHGLG00100011274	TARBP2	100	90.164	Heterocephalus_glaber_male
ENSRNOG00000042355	Tarbp2	100	63.562	ENSHCOG00000001027	tarbp2	100	63.288	Hippocampus_comes
ENSRNOG00000042355	Tarbp2	97	66.573	ENSIPUG00000023701	tarbp2	97	66.011	Ictalurus_punctatus
ENSRNOG00000042355	Tarbp2	100	92.077	ENSSTOG00000003678	TARBP2	100	92.623	Ictidomys_tridecemlineatus
ENSRNOG00000042355	Tarbp2	100	64.481	ENSKMAG00000012142	tarbp2	100	64.658	Kryptolebias_marmoratus
ENSRNOG00000042355	Tarbp2	100	65.574	ENSLBEG00000015027	tarbp2	100	64.932	Labrus_bergylta
ENSRNOG00000042355	Tarbp2	73	88.889	ENSLACG00000007087	TARBP2	78	88.889	Latimeria_chalumnae
ENSRNOG00000042355	Tarbp2	100	67.123	ENSLOCG00000005711	tarbp2	100	67.397	Lepisosteus_oculatus
ENSRNOG00000042355	Tarbp2	77	81.690	ENSLAFG00000002620	TARBP2	100	79.577	Loxodonta_africana
ENSRNOG00000042355	Tarbp2	100	92.623	ENSMFAG00000013567	TARBP2	100	91.803	Macaca_fascicularis
ENSRNOG00000042355	Tarbp2	100	92.896	ENSMMUG00000018492	TARBP2	100	92.077	Macaca_mulatta
ENSRNOG00000042355	Tarbp2	100	92.623	ENSMNEG00000036477	TARBP2	100	91.803	Macaca_nemestrina
ENSRNOG00000042355	Tarbp2	100	92.623	ENSMLEG00000029583	TARBP2	100	91.803	Mandrillus_leucophaeus
ENSRNOG00000042355	Tarbp2	95	66.092	ENSMAMG00000010272	tarbp2	97	66.379	Mastacembelus_armatus
ENSRNOG00000042355	Tarbp2	100	64.110	ENSMZEG00005006895	tarbp2	100	64.110	Maylandia_zebra
ENSRNOG00000042355	Tarbp2	100	96.164	ENSMAUG00000019805	Tarbp2	100	96.164	Mesocricetus_auratus
ENSRNOG00000042355	Tarbp2	94	93.913	ENSMICG00000027441	TARBP2	100	93.043	Microcebus_murinus
ENSRNOG00000042355	Tarbp2	100	94.521	ENSMOCG00000003691	Tarbp2	100	94.521	Microtus_ochrogaster
ENSRNOG00000042355	Tarbp2	94	66.570	ENSMMOG00000010374	tarbp2	100	66.860	Mola_mola
ENSRNOG00000042355	Tarbp2	100	63.215	ENSMALG00000009773	tarbp2	100	64.578	Monopterus_albus
ENSRNOG00000042355	Tarbp2	100	97.260	MGP_CAROLIEiJ_G0020356	Tarbp2	100	98.354	Mus_caroli
ENSRNOG00000042355	Tarbp2	100	97.260	ENSMUSG00000023051	Tarbp2	100	98.354	Mus_musculus
ENSRNOG00000042355	Tarbp2	100	96.712	MGP_PahariEiJ_G0020355	Tarbp2	100	96.712	Mus_pahari
ENSRNOG00000042355	Tarbp2	100	97.260	MGP_SPRETEiJ_G0021249	Tarbp2	100	98.354	Mus_spretus
ENSRNOG00000042355	Tarbp2	100	92.877	ENSMPUG00000005944	TARBP2	100	92.877	Mustela_putorius_furo
ENSRNOG00000042355	Tarbp2	100	92.896	ENSMLUG00000010035	TARBP2	100	91.530	Myotis_lucifugus
ENSRNOG00000042355	Tarbp2	100	92.896	ENSNLEG00000017690	TARBP2	100	92.077	Nomascus_leucogenys
ENSRNOG00000042355	Tarbp2	100	80.548	ENSMEUG00000001916	TARBP2	100	80.548	Notamacropus_eugenii
ENSRNOG00000042355	Tarbp2	62	92.000	ENSOPRG00000011397	TARBP2	100	92.000	Ochotona_princeps
ENSRNOG00000042355	Tarbp2	62	93.805	ENSODEG00000013413	TARBP2	100	92.035	Octodon_degus
ENSRNOG00000042355	Tarbp2	96	67.330	ENSONIG00000005115	tarbp2	97	66.289	Oreochromis_niloticus
ENSRNOG00000042355	Tarbp2	100	90.437	ENSOCUG00000005700	TARBP2	100	89.344	Oryctolagus_cuniculus
ENSRNOG00000042355	Tarbp2	100	65.479	ENSORLG00000005209	tarbp2	100	65.205	Oryzias_latipes
ENSRNOG00000042355	Tarbp2	96	66.097	ENSORLG00020017755	tarbp2	96	66.572	Oryzias_latipes_hni
ENSRNOG00000042355	Tarbp2	96	66.382	ENSORLG00015013237	tarbp2	96	66.856	Oryzias_latipes_hsok
ENSRNOG00000042355	Tarbp2	100	64.384	ENSOMEG00000018860	tarbp2	100	64.110	Oryzias_melastigma
ENSRNOG00000042355	Tarbp2	100	91.530	ENSOGAG00000001744	TARBP2	100	92.077	Otolemur_garnettii
ENSRNOG00000042355	Tarbp2	100	90.710	ENSOARG00000016437	TARBP2	100	90.710	Ovis_aries
ENSRNOG00000042355	Tarbp2	100	92.896	ENSPPAG00000030429	TARBP2	100	92.077	Pan_paniscus
ENSRNOG00000042355	Tarbp2	100	92.077	ENSPPRG00000000189	TARBP2	100	90.710	Panthera_pardus
ENSRNOG00000042355	Tarbp2	100	87.027	ENSPTIG00000007859	TARBP2	100	87.123	Panthera_tigris_altaica
ENSRNOG00000042355	Tarbp2	100	92.896	ENSPTRG00000005020	TARBP2	100	92.077	Pan_troglodytes
ENSRNOG00000042355	Tarbp2	100	92.623	ENSPANG00000010689	TARBP2	100	91.803	Papio_anubis
ENSRNOG00000042355	Tarbp2	100	66.393	ENSPKIG00000002455	tarbp2	100	66.393	Paramormyrops_kingsleyae
ENSRNOG00000042355	Tarbp2	99	64.641	ENSPMGG00000006497	tarbp2	99	64.088	Periophthalmus_magnuspinnatus
ENSRNOG00000042355	Tarbp2	100	94.795	ENSPEMG00000014285	Tarbp2	100	94.795	Peromyscus_maniculatus_bairdii
ENSRNOG00000042355	Tarbp2	94	57.101	ENSPMAG00000000105	tarbp2	100	56.232	Petromyzon_marinus
ENSRNOG00000042355	Tarbp2	100	80.822	ENSPCIG00000006672	TARBP2	92	80.822	Phascolarctos_cinereus
ENSRNOG00000042355	Tarbp2	100	66.304	ENSPFOG00000007586	tarbp2	100	65.205	Poecilia_formosa
ENSRNOG00000042355	Tarbp2	100	65.668	ENSPLAG00000017659	tarbp2	100	65.479	Poecilia_latipinna
ENSRNOG00000042355	Tarbp2	100	66.304	ENSPMEG00000007775	tarbp2	100	65.205	Poecilia_mexicana
ENSRNOG00000042355	Tarbp2	100	66.033	ENSPREG00000007815	tarbp2	100	64.932	Poecilia_reticulata
ENSRNOG00000042355	Tarbp2	100	85.792	ENSPPYG00000004583	TARBP2	100	83.924	Pongo_abelii
ENSRNOG00000042355	Tarbp2	100	76.503	ENSPCAG00000005352	TARBP2	100	76.230	Procavia_capensis
ENSRNOG00000042355	Tarbp2	100	92.077	ENSPCOG00000013102	TARBP2	100	92.623	Propithecus_coquereli
ENSRNOG00000042355	Tarbp2	100	88.251	ENSPVAG00000012286	TARBP2	100	88.251	Pteropus_vampyrus
ENSRNOG00000042355	Tarbp2	100	64.110	ENSPNYG00000014125	tarbp2	100	64.110	Pundamilia_nyererei
ENSRNOG00000042355	Tarbp2	100	63.760	ENSPNAG00000011128	tarbp2	100	64.658	Pygocentrus_nattereri
ENSRNOG00000042355	Tarbp2	100	92.077	ENSRBIG00000027150	TARBP2	100	91.803	Rhinopithecus_bieti
ENSRNOG00000042355	Tarbp2	100	92.077	ENSRROG00000044783	TARBP2	100	91.884	Rhinopithecus_roxellana
ENSRNOG00000042355	Tarbp2	100	91.803	ENSSBOG00000027305	TARBP2	100	91.803	Saimiri_boliviensis_boliviensis
ENSRNOG00000042355	Tarbp2	99	81.593	ENSSHAG00000007064	TARBP2	100	80.992	Sarcophilus_harrisii
ENSRNOG00000042355	Tarbp2	100	65.205	ENSSFOG00015010784	tarbp2	96	67.330	Scleropages_formosus
ENSRNOG00000042355	Tarbp2	100	65.574	ENSSMAG00000012769	tarbp2	100	65.753	Scophthalmus_maximus
ENSRNOG00000042355	Tarbp2	100	64.208	ENSSDUG00000018818	tarbp2	100	64.658	Seriola_dumerili
ENSRNOG00000042355	Tarbp2	100	63.934	ENSSLDG00000001835	tarbp2	100	64.384	Seriola_lalandi_dorsalis
ENSRNOG00000042355	Tarbp2	72	83.085	ENSSARG00000001010	TARBP2	73	83.085	Sorex_araneus
ENSRNOG00000042355	Tarbp2	100	53.243	ENSSPUG00000005895	TARBP2	100	51.743	Sphenodon_punctatus
ENSRNOG00000042355	Tarbp2	100	64.658	ENSSPAG00000022797	tarbp2	100	64.658	Stegastes_partitus
ENSRNOG00000042355	Tarbp2	100	92.623	ENSSSCG00000000276	TARBP2	100	92.174	Sus_scrofa
ENSRNOG00000042355	Tarbp2	100	64.658	ENSTRUG00000014379	tarbp2	100	64.384	Takifugu_rubripes
ENSRNOG00000042355	Tarbp2	100	64.208	ENSTNIG00000007065	tarbp2	100	64.110	Tetraodon_nigroviridis
ENSRNOG00000042355	Tarbp2	100	92.350	ENSTTRG00000017177	TARBP2	100	91.530	Tursiops_truncatus
ENSRNOG00000042355	Tarbp2	100	92.623	ENSUAMG00000009011	TARBP2	100	91.257	Ursus_americanus
ENSRNOG00000042355	Tarbp2	100	92.077	ENSUMAG00000010461	TARBP2	100	90.710	Ursus_maritimus
ENSRNOG00000042355	Tarbp2	100	92.896	ENSVVUG00000028150	TARBP2	100	91.594	Vulpes_vulpes
ENSRNOG00000042355	Tarbp2	97	69.209	ENSXETG00000012644	tarbp2	97	68.927	Xenopus_tropicalis
ENSRNOG00000042355	Tarbp2	100	66.304	ENSXMAG00000017836	tarbp2	100	65.205	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0007286	spermatid development	-	IEA	Process
GO:0007286	spermatid development	-	ISO	Process
GO:0007338	single fertilization	-	IEA	Process
GO:0007338	single fertilization	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0016442	RISC complex	-	IEA	Component
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0019899	enzyme binding	-	IEA	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0030422	production of siRNA involved in RNA interference	-	ISO	Process
GO:0030422	production of siRNA involved in RNA interference	-	ISS	Process
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISO	Process
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISS	Process
GO:0031054	pre-miRNA processing	-	ISO	Process
GO:0031054	pre-miRNA processing	-	ISS	Process
GO:0035068	micro-ribonucleoprotein complex	-	ISO	Component
GO:0035068	micro-ribonucleoprotein complex	-	ISS	Component
GO:0035087	siRNA loading onto RISC involved in RNA interference	-	IEA	Process
GO:0035087	siRNA loading onto RISC involved in RNA interference	-	ISO	Process
GO:0035196	production of miRNAs involved in gene silencing by miRNA	-	ISO	Process
GO:0035197	siRNA binding	-	ISO	Function
GO:0035197	siRNA binding	-	ISS	Function
GO:0035198	miRNA binding	-	IEA	Function
GO:0035264	multicellular organism growth	-	IEA	Process
GO:0035264	multicellular organism growth	-	ISO	Process
GO:0035280	miRNA loading onto RISC involved in gene silencing by miRNA	-	IEA	Process
GO:0035280	miRNA loading onto RISC involved in gene silencing by miRNA	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043403	skeletal muscle tissue regeneration	-	IEA	Process
GO:0043403	skeletal muscle tissue regeneration	-	ISO	Process
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0045070	positive regulation of viral genome replication	-	ISS	Process
GO:0045727	positive regulation of translation	-	IEA	Process
GO:0045727	positive regulation of translation	-	ISO	Process
GO:0046782	regulation of viral transcription	-	ISO	Process
GO:0046782	regulation of viral transcription	-	ISS	Process
GO:0047485	protein N-terminus binding	-	IEA	Function
GO:0047485	protein N-terminus binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0050689	negative regulation of defense response to virus by host	-	ISO	Process
GO:0050689	negative regulation of defense response to virus by host	-	ISS	Process
GO:0051149	positive regulation of muscle cell differentiation	-	IEA	Process
GO:0051149	positive regulation of muscle cell differentiation	-	ISO	Process
GO:0061351	neural precursor cell proliferation	-	IEA	Process
GO:0061351	neural precursor cell proliferation	-	ISO	Process
GO:0070578	RISC-loading complex	-	ISO	Component
GO:0070578	RISC-loading complex	-	ISS	Component
GO:0070883	pre-miRNA binding	-	IEA	Function
GO:0070883	pre-miRNA binding	-	ISO	Function
GO:0070883	pre-miRNA binding	-	ISO	Function
GO:0090065	regulation of production of siRNA involved in RNA interference	-	IEA	Process
GO:1903798	regulation of production of miRNAs involved in gene silencing by miRNA	-	IEA	Process
GO:1903798	regulation of production of miRNAs involved in gene silencing by miRNA	-	ISO	Process