EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRNOG00000042458 (Gene tree)
Gene ID
-
Gene Symbol
AABR07046707.1
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
123470 bases
Position
chr5:2278357-2401826
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000060092dsrmPF00035.263.3e-3112
ENSRNOP00000060092dsrmPF00035.263.3e-3122
ENSRNOP00000074008dsrmPF00035.262.5e-2812
ENSRNOP00000074008dsrmPF00035.262.5e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000090346AABR07046707.1-2022326-ENSRNOP00000074008324 (aa)-A0A0G2K703
ENSRNOT00000066590AABR07046707.1-2011530-ENSRNOP00000060092510 (aa)-F1LN29
Gene Model
Click here to download ENSRNOG00000042458's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000042458's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000042458AABR07046707.19850.000ENSRNOG00000007781Stau18545.190
ENSRNOG00000042458AABR07046707.15132.558ENSRNOG00000011195Prkra6030.622
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000042458AABR07046707.19992.547ENSG00000040341STAU210093.836Homo_sapiens
ENSRNOG00000042458AABR07046707.19666.361ENSAPOG00000002892stau27961.815Acanthochromis_polyacanthus
ENSRNOG00000042458AABR07046707.19993.789ENSAMEG00000001864STAU29095.031Ailuropoda_melanoleuca
ENSRNOG00000042458AABR07046707.19965.487ENSACIG00000000839stau28662.193Amphilophus_citrinellus
ENSRNOG00000042458AABR07046707.19666.361ENSAOCG00000013358stau27961.815Amphiprion_ocellaris
ENSRNOG00000042458AABR07046707.19666.361ENSAPEG00000022162stau27961.815Amphiprion_percula
ENSRNOG00000042458AABR07046707.19864.072ENSATEG00000013484stau29260.302Anabas_testudineus
ENSRNOG00000042458AABR07046707.19983.230ENSAPLG00000005175STAU27983.230Anas_platyrhynchos
ENSRNOG00000042458AABR07046707.19977.570ENSACAG00000012977STAU28867.515Anolis_carolinensis
ENSRNOG00000042458AABR07046707.19992.547ENSANAG00000023588STAU29781.953Aotus_nancymaae
ENSRNOG00000042458AABR07046707.19965.192ENSACLG00000024336stau29162.121Astatotilapia_calliptera
ENSRNOG00000042458AABR07046707.19972.500ENSAMXG00000000460stau28066.732Astyanax_mexicanus
ENSRNOG00000042458AABR07046707.19993.168ENSBTAG00000002076STAU28194.410Bos_taurus
ENSRNOG00000042458AABR07046707.19992.857ENSCJAG00000007632STAU28993.789Callithrix_jacchus
ENSRNOG00000042458AABR07046707.19790.794ENSCJAG00000009484-9877.612Callithrix_jacchus
ENSRNOG00000042458AABR07046707.19993.789ENSCAFG00000008077STAU28794.720Canis_familiaris
ENSRNOG00000042458AABR07046707.19993.789ENSCAFG00020017809STAU28195.031Canis_lupus_dingo
ENSRNOG00000042458AABR07046707.19993.168ENSCHIG00000012254STAU28894.044Capra_hircus
ENSRNOG00000042458AABR07046707.19972.897ENSTSYG00000034361-9673.186Carlito_syrichta
ENSRNOG00000042458AABR07046707.16196.954ENSTSYG00000005247-9992.925Carlito_syrichta
ENSRNOG00000042458AABR07046707.19988.820ENSCAPG00000017061-9872.222Cavia_aperea
ENSRNOG00000042458AABR07046707.19993.478ENSCPOG00000015001-9794.720Cavia_porcellus
ENSRNOG00000042458AABR07046707.19993.478ENSCCAG00000035053-9886.133Cebus_capucinus
ENSRNOG00000042458AABR07046707.19992.857ENSCATG00000044825STAU29794.099Cercocebus_atys
ENSRNOG00000042458AABR07046707.19966.460ENSCATG00000031335-9958.551Cercocebus_atys
ENSRNOG00000042458AABR07046707.19992.547ENSCLAG00000001824STAU29793.789Chinchilla_lanigera
ENSRNOG00000042458AABR07046707.19992.857ENSCSAG00000013572-9094.099Chlorocebus_sabaeus
ENSRNOG00000042458AABR07046707.19978.505ENSCHOG00000010590STAU28964.384Choloepus_hoffmanni
ENSRNOG00000042458AABR07046707.19983.851ENSCPBG00000006987STAU28373.219Chrysemys_picta_bellii
ENSRNOG00000042458AABR07046707.110069.444ENSCANG00000031540-10069.444Colobus_angolensis_palliatus
ENSRNOG00000042458AABR07046707.16196.447ENSCANG00000039699-9992.453Colobus_angolensis_palliatus
ENSRNOG00000042458AABR07046707.19994.099ENSCGRG00001006522Stau28795.342Cricetulus_griseus_chok1gshd
ENSRNOG00000042458AABR07046707.19990.093ENSCGRG00000007511Stau29991.331Cricetulus_griseus_crigri
ENSRNOG00000042458AABR07046707.19859.760ENSCSEG00000010050stau28058.144Cynoglossus_semilaevis
ENSRNOG00000042458AABR07046707.19863.422ENSCVAG00000009893stau27960.300Cyprinodon_variegatus
ENSRNOG00000042458AABR07046707.19970.625ENSDARG00000026801stau27564.971Danio_rerio
ENSRNOG00000042458AABR07046707.19991.925ENSDNOG00000039875STAU28793.168Dasypus_novemcinctus
ENSRNOG00000042458AABR07046707.19992.857ENSDORG00000014308Stau29794.099Dipodomys_ordii
ENSRNOG00000042458AABR07046707.19981.056ENSETEG00000009087STAU28975.147Echinops_telfairi
ENSRNOG00000042458AABR07046707.16446.262ENSEBUG00000006591STAU28833.981Eptatretus_burgeri
ENSRNOG00000042458AABR07046707.19993.168ENSEASG00005020174STAU28794.410Equus_asinus_asinus
ENSRNOG00000042458AABR07046707.19993.168ENSECAG00000000260STAU28294.410Equus_caballus
ENSRNOG00000042458AABR07046707.19992.212ENSEEUG00000015102STAU28693.458Erinaceus_europaeus
ENSRNOG00000042458AABR07046707.19966.667ENSELUG00000006988stau28466.667Esox_lucius
ENSRNOG00000042458AABR07046707.19993.789ENSFCAG00000004917STAU29682.489Felis_catus
ENSRNOG00000042458AABR07046707.19982.919ENSFALG00000008552STAU27382.919Ficedula_albicollis
ENSRNOG00000042458AABR07046707.19993.478ENSFDAG00000005157STAU210093.151Fukomys_damarensis
ENSRNOG00000042458AABR07046707.16759.824ENSFHEG00000018386stau28559.824Fundulus_heteroclitus
ENSRNOG00000042458AABR07046707.18065.122ENSGMOG00000005428stau26472.936Gadus_morhua
ENSRNOG00000042458AABR07046707.19983.230ENSGALG00000031390STAU28183.230Gallus_gallus
ENSRNOG00000042458AABR07046707.19963.363ENSGAFG00000008442stau27963.881Gambusia_affinis
ENSRNOG00000042458AABR07046707.19667.601ENSGACG00000002757stau28462.261Gasterosteus_aculeatus
ENSRNOG00000042458AABR07046707.19983.540ENSGAGG00000003794STAU27973.581Gopherus_agassizii
ENSRNOG00000042458AABR07046707.19992.857ENSGGOG00000026508STAU29794.099Gorilla_gorilla
ENSRNOG00000042458AABR07046707.19068.836ENSGGOG00000036979-10068.836Gorilla_gorilla
ENSRNOG00000042458AABR07046707.19965.192ENSHBUG00000020209stau29162.121Haplochromis_burtoni
ENSRNOG00000042458AABR07046707.19992.857ENSHGLG00000014888STAU28794.099Heterocephalus_glaber_female
ENSRNOG00000042458AABR07046707.19992.857ENSHGLG00100005337STAU28794.099Heterocephalus_glaber_male
ENSRNOG00000042458AABR07046707.19864.985ENSHCOG00000004724stau28464.688Hippocampus_comes
ENSRNOG00000042458AABR07046707.19964.848ENSIPUG00000009105stau29060.845Ictalurus_punctatus
ENSRNOG00000042458AABR07046707.19993.478ENSSTOG00000011076STAU28194.720Ictidomys_tridecemlineatus
ENSRNOG00000042458AABR07046707.110094.444ENSJJAG00000020228Stau210095.062Jaculus_jaculus
ENSRNOG00000042458AABR07046707.19864.286ENSKMAG00000006853stau27960.829Kryptolebias_marmoratus
ENSRNOG00000042458AABR07046707.19966.770ENSLBEG00000014492stau29163.353Labrus_bergylta
ENSRNOG00000042458AABR07046707.19980.000ENSLACG00000006873STAU29471.848Latimeria_chalumnae
ENSRNOG00000042458AABR07046707.110053.654ENSLOCG00000003717stau28253.846Lepisosteus_oculatus
ENSRNOG00000042458AABR07046707.19993.478ENSLAFG00000013327STAU28794.720Loxodonta_africana
ENSRNOG00000042458AABR07046707.110074.691ENSMFAG00000037793-10074.691Macaca_fascicularis
ENSRNOG00000042458AABR07046707.19992.547ENSMFAG00000044834STAU29793.789Macaca_fascicularis
ENSRNOG00000042458AABR07046707.19974.534ENSMMUG00000048014-9663.907Macaca_mulatta
ENSRNOG00000042458AABR07046707.19992.835ENSMMUG00000021588-9889.474Macaca_mulatta
ENSRNOG00000042458AABR07046707.19992.857ENSMNEG00000035325STAU29794.099Macaca_nemestrina
ENSRNOG00000042458AABR07046707.19077.740ENSMNEG00000004012-9777.740Macaca_nemestrina
ENSRNOG00000042458AABR07046707.19675.884ENSMLEG00000034013-9875.884Mandrillus_leucophaeus
ENSRNOG00000042458AABR07046707.19992.547ENSMLEG00000044427STAU28793.478Mandrillus_leucophaeus
ENSRNOG00000042458AABR07046707.110060.976ENSMAMG00000023036stau29260.606Mastacembelus_armatus
ENSRNOG00000042458AABR07046707.19965.192ENSMZEG00005021462stau29162.121Maylandia_zebra
ENSRNOG00000042458AABR07046707.19983.540ENSMGAG00000011523STAU27983.540Meleagris_gallopavo
ENSRNOG00000042458AABR07046707.18992.334ENSMAUG00000021644Stau28678.060Mesocricetus_auratus
ENSRNOG00000042458AABR07046707.19992.547ENSMICG00000002886-9681.741Microcebus_murinus
ENSRNOG00000042458AABR07046707.17191.266ENSMICG00000032397-9778.723Microcebus_murinus
ENSRNOG00000042458AABR07046707.19988.509ENSMOCG00000001037Stau28689.752Microtus_ochrogaster
ENSRNOG00000042458AABR07046707.19964.985ENSMMOG00000003579stau29161.787Mola_mola
ENSRNOG00000042458AABR07046707.19675.641ENSMODG00000007112-10076.282Monodelphis_domestica
ENSRNOG00000042458AABR07046707.110058.271ENSMALG00000001524stau28958.459Monopterus_albus
ENSRNOG00000042458AABR07046707.19995.963MGP_CAROLIEiJ_G0013967Stau29795.963Mus_caroli
ENSRNOG00000042458AABR07046707.19995.963ENSMUSG00000025920Stau29795.963Mus_musculus
ENSRNOG00000042458AABR07046707.19994.099MGP_PahariEiJ_G0023852Stau29795.652Mus_pahari
ENSRNOG00000042458AABR07046707.19995.963MGP_SPRETEiJ_G0014772Stau29795.963Mus_spretus
ENSRNOG00000042458AABR07046707.19993.789ENSMPUG00000010221STAU28195.031Mustela_putorius_furo
ENSRNOG00000042458AABR07046707.19993.146ENSMLUG00000000592STAU29794.393Myotis_lucifugus
ENSRNOG00000042458AABR07046707.19992.857ENSNGAG00000017873Stau29794.099Nannospalax_galili
ENSRNOG00000042458AABR07046707.19965.192ENSNBRG00000023829stau27962.121Neolamprologus_brichardi
ENSRNOG00000042458AABR07046707.19985.231ENSNLEG00000036286-9985.911Nomascus_leucogenys
ENSRNOG00000042458AABR07046707.19993.168ENSNLEG00000001342STAU28792.857Nomascus_leucogenys
ENSRNOG00000042458AABR07046707.16576.650ENSMEUG00000011345-5876.650Notamacropus_eugenii
ENSRNOG00000042458AABR07046707.19985.093ENSOPRG00000008474STAU29075.930Ochotona_princeps
ENSRNOG00000042458AABR07046707.19993.789ENSODEG00000003610STAU29795.031Octodon_degus
ENSRNOG00000042458AABR07046707.19965.487ENSONIG00000014300stau28162.311Oreochromis_niloticus
ENSRNOG00000042458AABR07046707.16063.918ENSOANG00000031011-9855.242Ornithorhynchus_anatinus
ENSRNOG00000042458AABR07046707.19993.789ENSOCUG00000013843STAU28195.031Oryctolagus_cuniculus
ENSRNOG00000042458AABR07046707.19863.205ENSORLG00000007943stau27465.455Oryzias_latipes
ENSRNOG00000042458AABR07046707.19863.501ENSORLG00020016648stau27865.758Oryzias_latipes_hni
ENSRNOG00000042458AABR07046707.19863.501ENSORLG00015016882stau29565.455Oryzias_latipes_hsok
ENSRNOG00000042458AABR07046707.19863.529ENSOMEG00000010542stau28261.742Oryzias_melastigma
ENSRNOG00000042458AABR07046707.19993.458ENSOGAG00000001112STAU210086.631Otolemur_garnettii
ENSRNOG00000042458AABR07046707.19993.168ENSOARG00000006011STAU28094.410Ovis_aries
ENSRNOG00000042458AABR07046707.19992.857ENSPPAG00000034287STAU29794.099Pan_paniscus
ENSRNOG00000042458AABR07046707.19976.471ENSPPAG00000041507-9277.090Pan_paniscus
ENSRNOG00000042458AABR07046707.19993.789ENSPPRG00000024814STAU28794.720Panthera_pardus
ENSRNOG00000042458AABR07046707.19993.789ENSPTIG00000007856STAU29795.031Panthera_tigris_altaica
ENSRNOG00000042458AABR07046707.19968.012ENSPTRG00000045302-9856.485Pan_troglodytes
ENSRNOG00000042458AABR07046707.18978.472ENSPTRG00000043384-9979.167Pan_troglodytes
ENSRNOG00000042458AABR07046707.19992.547ENSPTRG00000047797STAU29793.789Pan_troglodytes
ENSRNOG00000042458AABR07046707.19992.857ENSPANG00000021222STAU28793.789Papio_anubis
ENSRNOG00000042458AABR07046707.19863.777ENSPKIG00000006663stau28758.506Paramormyrops_kingsleyae
ENSRNOG00000042458AABR07046707.19982.609ENSPSIG00000003686STAU28683.540Pelodiscus_sinensis
ENSRNOG00000042458AABR07046707.19963.142ENSPMGG00000009011stau28360.612Periophthalmus_magnuspinnatus
ENSRNOG00000042458AABR07046707.19995.963ENSPEMG00000012104Stau29795.963Peromyscus_maniculatus_bairdii
ENSRNOG00000042458AABR07046707.19659.048ENSPMAG00000003826stau28157.015Petromyzon_marinus
ENSRNOG00000042458AABR07046707.19976.324ENSPCIG00000012872STAU27877.570Phascolarctos_cinereus
ENSRNOG00000042458AABR07046707.19863.314ENSPFOG00000013147stau27960.413Poecilia_formosa
ENSRNOG00000042458AABR07046707.19066.894ENSPLAG00000008809stau28466.894Poecilia_latipinna
ENSRNOG00000042458AABR07046707.15451.439ENSPLAG00000009029stau27151.439Poecilia_latipinna
ENSRNOG00000042458AABR07046707.19665.705ENSPMEG00000014168stau28160.413Poecilia_mexicana
ENSRNOG00000042458AABR07046707.19963.501ENSPREG00000017795stau27764.095Poecilia_reticulata
ENSRNOG00000042458AABR07046707.19981.988ENSPPYG00000018674STAU28183.230Pongo_abelii
ENSRNOG00000042458AABR07046707.19979.751ENSPCAG00000004679STAU29980.062Procavia_capensis
ENSRNOG00000042458AABR07046707.110069.307ENSPCOG00000011840STAU29970.627Propithecus_coquereli
ENSRNOG00000042458AABR07046707.19992.236ENSPVAG00000014575STAU28093.769Pteropus_vampyrus
ENSRNOG00000042458AABR07046707.19965.192ENSPNYG00000001132stau29162.121Pundamilia_nyererei
ENSRNOG00000042458AABR07046707.19971.651ENSPNAG00000023606stau28965.820Pygocentrus_nattereri
ENSRNOG00000042458AABR07046707.19992.547ENSRBIG00000034859-9781.953Rhinopithecus_bieti
ENSRNOG00000042458AABR07046707.16592.381ENSRROG00000039882-9477.135Rhinopithecus_roxellana
ENSRNOG00000042458AABR07046707.19960.559ENSRROG00000029227-9958.575Rhinopithecus_roxellana
ENSRNOG00000042458AABR07046707.19992.857ENSSBOG00000032091STAU29794.099Saimiri_boliviensis_boliviensis
ENSRNOG00000042458AABR07046707.18576.173ENSSHAG00000012057-9077.174Sarcophilus_harrisii
ENSRNOG00000042458AABR07046707.19968.210ENSSFOG00015012905stau28961.719Scleropages_formosus
ENSRNOG00000042458AABR07046707.19965.976ENSSMAG00000016487stau28362.004Scophthalmus_maximus
ENSRNOG00000042458AABR07046707.19666.159ENSSDUG00000012535stau29060.113Seriola_dumerili
ENSRNOG00000042458AABR07046707.19666.159ENSSLDG00000007156stau29161.059Seriola_lalandi_dorsalis
ENSRNOG00000042458AABR07046707.16893.243ENSSARG00000009750-6093.243Sorex_araneus
ENSRNOG00000042458AABR07046707.19982.298ENSSPUG00000018208STAU27877.830Sphenodon_punctatus
ENSRNOG00000042458AABR07046707.19865.465ENSSPAG00000000291stau28859.926Stegastes_partitus
ENSRNOG00000042458AABR07046707.19993.478ENSSSCG00000006179-9795.031Sus_scrofa
ENSRNOG00000042458AABR07046707.19982.609ENSTGUG00000011535STAU28782.609Taeniopygia_guttata
ENSRNOG00000042458AABR07046707.19963.717ENSTRUG00000001905stau28960.606Takifugu_rubripes
ENSRNOG00000042458AABR07046707.19959.714ENSTNIG00000008181stau29754.466Tetraodon_nigroviridis
ENSRNOG00000042458AABR07046707.19991.615ENSTBEG00000016245STAU28792.857Tupaia_belangeri
ENSRNOG00000042458AABR07046707.19992.857ENSTTRG00000009236STAU28094.393Tursiops_truncatus
ENSRNOG00000042458AABR07046707.19993.789ENSUMAG00000018908STAU29981.628Ursus_maritimus
ENSRNOG00000042458AABR07046707.19992.547ENSVPAG00000001523STAU28981.996Vicugna_pacos
ENSRNOG00000042458AABR07046707.19993.789ENSVVUG00000019217-8794.720Vulpes_vulpes
ENSRNOG00000042458AABR07046707.19970.807ENSXETG00000011826stau27871.429Xenopus_tropicalis
ENSRNOG00000042458AABR07046707.15680.328ENSXCOG00000007032stau28264.327Xiphophorus_couchianus
ENSRNOG00000042458AABR07046707.19865.409ENSXMAG00000010426stau29861.209Xiphophorus_maculatus

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