EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000042740 (Gene tree)
Gene ID: 299743
Gene Symbol: Mrpl42
Alias: L42mt|LOC299743|MRP-L42|MRP-S32|Mrps32|S32mt
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 23809 bases
Position: chr7:36573654-36597462
Accession: 1304915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000061916	MRP-S32	PF10210.9	7.7e-42	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000066322	-	671	XM_008765315	ENSRNOP00000061916	141 (aa)	XP_008763537	B5DEP4

Gene Model

Click here to download ENSRNOG00000042740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000042740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000042740	Mrpl42	100	85.915	ENSRNOG00000021867	AABR07009508.1	99	85.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000042740	Mrpl42	99	77.143	ENSG00000198015	MRPL42	99	77.143	Homo_sapiens
ENSRNOG00000042740	Mrpl42	76	76.636	ENSAMEG00000009832	MRPL42	84	76.636	Ailuropoda_melanoleuca
ENSRNOG00000042740	Mrpl42	68	60.417	ENSACIG00000017826	mrpl42	69	60.417	Amphilophus_citrinellus
ENSRNOG00000042740	Mrpl42	100	57.042	ENSAPLG00000015057	MRPL42	99	57.042	Anas_platyrhynchos
ENSRNOG00000042740	Mrpl42	99	56.429	ENSANAG00000036083	-	98	56.429	Aotus_nancymaae
ENSRNOG00000042740	Mrpl42	99	73.571	ENSANAG00000036935	-	99	73.571	Aotus_nancymaae
ENSRNOG00000042740	Mrpl42	89	70.400	ENSANAG00000033101	-	83	70.400	Aotus_nancymaae
ENSRNOG00000042740	Mrpl42	89	73.016	ENSANAG00000000692	-	90	73.016	Aotus_nancymaae
ENSRNOG00000042740	Mrpl42	75	70.755	ENSBTAG00000052971	-	97	70.755	Bos_taurus
ENSRNOG00000042740	Mrpl42	99	78.417	ENSBTAG00000002708	MRPL42	98	78.417	Bos_taurus
ENSRNOG00000042740	Mrpl42	99	77.143	ENSCJAG00000046971	MRPL42	99	77.143	Callithrix_jacchus
ENSRNOG00000042740	Mrpl42	50	72.727	ENSCAFG00000030257	-	86	72.727	Canis_familiaris
ENSRNOG00000042740	Mrpl42	50	80.000	ENSCAFG00020016271	-	93	80.000	Canis_lupus_dingo
ENSRNOG00000042740	Mrpl42	69	80.412	ENSCAFG00020022967	-	85	80.412	Canis_lupus_dingo
ENSRNOG00000042740	Mrpl42	89	78.400	ENSCHIG00000014921	MRPL42	98	78.400	Capra_hircus
ENSRNOG00000042740	Mrpl42	91	70.312	ENSTSYG00000036466	-	88	70.312	Carlito_syrichta
ENSRNOG00000042740	Mrpl42	99	77.143	ENSTSYG00000006370	-	99	77.143	Carlito_syrichta
ENSRNOG00000042740	Mrpl42	77	73.394	ENSTSYG00000032810	-	100	73.394	Carlito_syrichta
ENSRNOG00000042740	Mrpl42	99	63.309	ENSCAPG00000015105	-	98	63.309	Cavia_aperea
ENSRNOG00000042740	Mrpl42	84	78.992	ENSCAPG00000016985	-	89	78.992	Cavia_aperea
ENSRNOG00000042740	Mrpl42	96	77.206	ENSCPOG00000030015	-	97	77.143	Cavia_porcellus
ENSRNOG00000042740	Mrpl42	99	64.029	ENSCPOG00000008943	-	98	64.029	Cavia_porcellus
ENSRNOG00000042740	Mrpl42	89	72.000	ENSCCAG00000032203	-	76	72.000	Cebus_capucinus
ENSRNOG00000042740	Mrpl42	89	60.000	ENSCCAG00000029290	-	80	60.000	Cebus_capucinus
ENSRNOG00000042740	Mrpl42	99	76.429	ENSCCAG00000031179	-	99	76.429	Cebus_capucinus
ENSRNOG00000042740	Mrpl42	99	77.143	ENSCATG00000037616	MRPL42	99	77.143	Cercocebus_atys
ENSRNOG00000042740	Mrpl42	99	79.286	ENSCLAG00000005421	MRPL42	99	79.286	Chinchilla_lanigera
ENSRNOG00000042740	Mrpl42	99	77.143	ENSCSAG00000003706	MRPL42	99	77.143	Chlorocebus_sabaeus
ENSRNOG00000042740	Mrpl42	84	44.915	ENSCHOG00000007010	-	100	44.915	Choloepus_hoffmanni
ENSRNOG00000042740	Mrpl42	100	63.265	ENSCPBG00000001581	MRPL42	100	63.265	Chrysemys_picta_bellii
ENSRNOG00000042740	Mrpl42	99	80.000	ENSCANG00000033457	MRPL42	99	80.000	Colobus_angolensis_palliatus
ENSRNOG00000042740	Mrpl42	100	83.688	ENSCGRG00001012694	-	98	83.688	Cricetulus_griseus_chok1gshd
ENSRNOG00000042740	Mrpl42	100	67.376	ENSCGRG00001003813	-	100	67.376	Cricetulus_griseus_chok1gshd
ENSRNOG00000042740	Mrpl42	100	83.688	ENSCGRG00000003801	Mrpl42	100	83.688	Cricetulus_griseus_crigri
ENSRNOG00000042740	Mrpl42	99	74.286	ENSDNOG00000032710	-	99	74.286	Dasypus_novemcinctus
ENSRNOG00000042740	Mrpl42	99	71.429	ENSDNOG00000049701	-	99	71.429	Dasypus_novemcinctus
ENSRNOG00000042740	Mrpl42	100	78.723	ENSDORG00000015571	Mrpl42	100	78.723	Dipodomys_ordii
ENSRNOG00000042740	Mrpl42	87	53.226	ENSETEG00000014745	-	92	53.226	Echinops_telfairi
ENSRNOG00000042740	Mrpl42	99	81.295	ENSEASG00005019361	MRPL42	98	81.295	Equus_asinus_asinus
ENSRNOG00000042740	Mrpl42	99	80.576	ENSECAG00000026888	MRPL42	98	80.576	Equus_caballus
ENSRNOG00000042740	Mrpl42	100	77.305	ENSFCAG00000037907	-	99	77.305	Felis_catus
ENSRNOG00000042740	Mrpl42	88	77.419	ENSFCAG00000040567	-	100	77.419	Felis_catus
ENSRNOG00000042740	Mrpl42	89	60.000	ENSFCAG00000036356	-	78	60.000	Felis_catus
ENSRNOG00000042740	Mrpl42	95	62.069	ENSFALG00000010717	MRPL42	99	62.069	Ficedula_albicollis
ENSRNOG00000042740	Mrpl42	100	80.142	ENSFDAG00000018129	MRPL42	100	80.142	Fukomys_damarensis
ENSRNOG00000042740	Mrpl42	95	55.862	ENSGALG00000011293	MRPL42	99	55.862	Gallus_gallus
ENSRNOG00000042740	Mrpl42	100	65.306	ENSGAGG00000010125	MRPL42	100	65.306	Gopherus_agassizii
ENSRNOG00000042740	Mrpl42	99	77.143	ENSGGOG00000022760	MRPL42	99	77.143	Gorilla_gorilla
ENSRNOG00000042740	Mrpl42	85	76.667	ENSHGLG00000008248	-	98	76.667	Heterocephalus_glaber_female
ENSRNOG00000042740	Mrpl42	87	77.869	ENSHGLG00000007399	-	92	78.400	Heterocephalus_glaber_female
ENSRNOG00000042740	Mrpl42	84	76.271	ENSHGLG00100013257	-	96	76.271	Heterocephalus_glaber_male
ENSRNOG00000042740	Mrpl42	89	78.400	ENSHGLG00100018317	-	88	78.400	Heterocephalus_glaber_male
ENSRNOG00000042740	Mrpl42	99	77.143	ENSSTOG00000026544	MRPL42	99	77.143	Ictidomys_tridecemlineatus
ENSRNOG00000042740	Mrpl42	87	64.228	ENSLACG00000006919	MRPL42	84	64.228	Latimeria_chalumnae
ENSRNOG00000042740	Mrpl42	86	76.033	ENSLAFG00000013779	MRPL42	86	76.033	Loxodonta_africana
ENSRNOG00000042740	Mrpl42	99	77.143	ENSMFAG00000032330	MRPL42	99	77.143	Macaca_fascicularis
ENSRNOG00000042740	Mrpl42	99	75.000	ENSMMUG00000016805	MRPL42	99	75.000	Macaca_mulatta
ENSRNOG00000042740	Mrpl42	99	77.143	ENSMNEG00000028853	MRPL42	99	77.143	Macaca_nemestrina
ENSRNOG00000042740	Mrpl42	99	77.857	ENSMLEG00000038104	MRPL42	99	77.857	Mandrillus_leucophaeus
ENSRNOG00000042740	Mrpl42	95	57.241	ENSMGAG00000011346	MRPL42	99	57.241	Meleagris_gallopavo
ENSRNOG00000042740	Mrpl42	100	66.667	ENSMAUG00000018130	-	100	66.667	Mesocricetus_auratus
ENSRNOG00000042740	Mrpl42	100	75.887	ENSMAUG00000010057	-	100	75.887	Mesocricetus_auratus
ENSRNOG00000042740	Mrpl42	68	75.000	ENSMICG00000028094	-	81	83.117	Microcebus_murinus
ENSRNOG00000042740	Mrpl42	99	77.857	ENSMICG00000032596	-	99	77.857	Microcebus_murinus
ENSRNOG00000042740	Mrpl42	92	75.385	ENSMICG00000035189	-	90	75.385	Microcebus_murinus
ENSRNOG00000042740	Mrpl42	87	76.230	ENSMICG00000036541	-	99	75.472	Microcebus_murinus
ENSRNOG00000042740	Mrpl42	68	75.000	ENSMICG00000045594	-	97	75.000	Microcebus_murinus
ENSRNOG00000042740	Mrpl42	100	81.560	ENSMOCG00000013541	-	100	81.560	Microtus_ochrogaster
ENSRNOG00000042740	Mrpl42	100	78.723	ENSMOCG00000004616	-	100	78.723	Microtus_ochrogaster
ENSRNOG00000042740	Mrpl42	100	85.915	MGP_CAROLIEiJ_G0015750	Mrpl42	100	85.915	Mus_caroli
ENSRNOG00000042740	Mrpl42	100	84.507	ENSMUSG00000062981	Mrpl42	100	84.507	Mus_musculus
ENSRNOG00000042740	Mrpl42	97	77.372	ENSMLUG00000025058	-	96	77.372	Myotis_lucifugus
ENSRNOG00000042740	Mrpl42	99	74.101	ENSMLUG00000029623	-	98	74.101	Myotis_lucifugus
ENSRNOG00000042740	Mrpl42	99	71.429	ENSMLUG00000023702	-	99	71.429	Myotis_lucifugus
ENSRNOG00000042740	Mrpl42	90	76.378	ENSNGAG00000000717	Mrpl42	99	76.378	Nannospalax_galili
ENSRNOG00000042740	Mrpl42	99	77.143	ENSNLEG00000005699	MRPL42	99	77.143	Nomascus_leucogenys
ENSRNOG00000042740	Mrpl42	99	72.143	ENSOPRG00000010967	MRPL42	99	72.143	Ochotona_princeps
ENSRNOG00000042740	Mrpl42	84	79.832	ENSODEG00000008681	-	100	79.832	Octodon_degus
ENSRNOG00000042740	Mrpl42	99	70.922	ENSODEG00000012689	-	99	72.340	Octodon_degus
ENSRNOG00000042740	Mrpl42	99	65.957	ENSODEG00000016452	-	98	67.376	Octodon_degus
ENSRNOG00000042740	Mrpl42	100	72.535	ENSOCUG00000010928	MRPL42	100	72.535	Oryctolagus_cuniculus
ENSRNOG00000042740	Mrpl42	99	71.429	ENSOGAG00000027617	-	99	71.429	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	99	67.857	ENSOGAG00000026395	-	99	67.857	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	99	71.429	ENSOGAG00000034004	-	99	71.429	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	99	75.714	ENSOGAG00000025600	-	99	75.714	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	99	74.286	ENSOGAG00000025686	-	99	74.286	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	99	70.714	ENSOGAG00000030438	-	99	70.714	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	99	68.571	ENSOGAG00000024156	-	99	68.571	Otolemur_garnettii
ENSRNOG00000042740	Mrpl42	89	79.200	ENSOARG00000015849	MRPL42	98	79.200	Ovis_aries
ENSRNOG00000042740	Mrpl42	99	75.714	ENSPPAG00000038254	MRPL42	99	75.714	Pan_paniscus
ENSRNOG00000042740	Mrpl42	100	76.596	ENSPPRG00000015755	-	99	76.596	Panthera_pardus
ENSRNOG00000042740	Mrpl42	100	77.305	ENSPPRG00000013218	-	99	77.305	Panthera_pardus
ENSRNOG00000042740	Mrpl42	89	57.143	ENSPPRG00000006533	-	78	57.143	Panthera_pardus
ENSRNOG00000042740	Mrpl42	88	75.000	ENSPPRG00000017935	-	100	75.000	Panthera_pardus
ENSRNOG00000042740	Mrpl42	100	77.305	ENSPTIG00000019099	-	99	77.305	Panthera_tigris_altaica
ENSRNOG00000042740	Mrpl42	100	77.305	ENSPTIG00000009394	-	99	77.305	Panthera_tigris_altaica
ENSRNOG00000042740	Mrpl42	83	71.795	ENSPTIG00000009717	-	90	75.676	Panthera_tigris_altaica
ENSRNOG00000042740	Mrpl42	99	75.714	ENSPTRG00000022791	MRPL42	99	75.714	Pan_troglodytes
ENSRNOG00000042740	Mrpl42	99	68.276	ENSPANG00000030179	MRPL42	99	68.276	Papio_anubis
ENSRNOG00000042740	Mrpl42	100	60.544	ENSPSIG00000010745	MRPL42	100	60.544	Pelodiscus_sinensis
ENSRNOG00000042740	Mrpl42	100	80.142	ENSPEMG00000020562	-	100	80.142	Peromyscus_maniculatus_bairdii
ENSRNOG00000042740	Mrpl42	99	61.429	ENSPCIG00000001472	-	73	61.429	Phascolarctos_cinereus
ENSRNOG00000042740	Mrpl42	99	76.429	ENSPPYG00000004833	MRPL42	99	76.429	Pongo_abelii
ENSRNOG00000042740	Mrpl42	84	77.966	ENSPCAG00000003791	MRPL42	100	77.966	Procavia_capensis
ENSRNOG00000042740	Mrpl42	96	72.059	ENSPCOG00000014986	-	98	72.059	Propithecus_coquereli
ENSRNOG00000042740	Mrpl42	99	65.000	ENSPCOG00000025008	-	99	65.000	Propithecus_coquereli
ENSRNOG00000042740	Mrpl42	99	64.286	ENSPCOG00000018896	-	98	64.286	Propithecus_coquereli
ENSRNOG00000042740	Mrpl42	58	60.976	ENSPVAG00000013736	-	69	60.976	Pteropus_vampyrus
ENSRNOG00000042740	Mrpl42	89	57.143	ENSRBIG00000044361	-	77	57.143	Rhinopithecus_bieti
ENSRNOG00000042740	Mrpl42	99	78.571	ENSRBIG00000011046	-	99	78.571	Rhinopithecus_bieti
ENSRNOG00000042740	Mrpl42	99	78.571	ENSRROG00000033949	MRPL42	99	78.571	Rhinopithecus_roxellana
ENSRNOG00000042740	Mrpl42	84	55.085	ENSSBOG00000025086	-	100	55.085	Saimiri_boliviensis_boliviensis
ENSRNOG00000042740	Mrpl42	99	73.571	ENSSBOG00000009656	-	99	73.571	Saimiri_boliviensis_boliviensis
ENSRNOG00000042740	Mrpl42	67	74.468	ENSSBOG00000027483	-	82	74.468	Saimiri_boliviensis_boliviensis
ENSRNOG00000042740	Mrpl42	84	60.833	ENSSFOG00015006975	mrpl42	82	60.833	Scleropages_formosus
ENSRNOG00000042740	Mrpl42	100	57.823	ENSSPUG00000015009	-	99	57.823	Sphenodon_punctatus
ENSRNOG00000042740	Mrpl42	53	54.321	ENSSPUG00000001998	-	100	54.321	Sphenodon_punctatus
ENSRNOG00000042740	Mrpl42	82	52.586	ENSSPAG00000013637	mrpl42	83	52.586	Stegastes_partitus
ENSRNOG00000042740	Mrpl42	70	53.535	ENSSSCG00000034693	-	84	53.535	Sus_scrofa
ENSRNOG00000042740	Mrpl42	98	58.696	ENSSSCG00000036897	-	97	58.696	Sus_scrofa
ENSRNOG00000042740	Mrpl42	76	58.407	ENSSSCG00000035613	-	88	63.636	Sus_scrofa
ENSRNOG00000042740	Mrpl42	99	78.417	ENSSSCG00000030478	-	98	78.417	Sus_scrofa
ENSRNOG00000042740	Mrpl42	84	65.254	ENSTGUG00000008272	MRPL42	100	65.254	Taeniopygia_guttata
ENSRNOG00000042740	Mrpl42	62	59.091	ENSTNIG00000018478	mrpl42	67	59.091	Tetraodon_nigroviridis
ENSRNOG00000042740	Mrpl42	87	76.423	ENSTTRG00000003312	MRPL42	92	76.423	Tursiops_truncatus
ENSRNOG00000042740	Mrpl42	57	75.000	ENSUAMG00000019831	-	84	75.000	Ursus_americanus
ENSRNOG00000042740	Mrpl42	99	81.295	ENSUAMG00000025405	-	98	81.295	Ursus_americanus
ENSRNOG00000042740	Mrpl42	99	81.295	ENSUMAG00000003107	-	98	81.295	Ursus_maritimus
ENSRNOG00000042740	Mrpl42	87	71.545	ENSUMAG00000014643	-	77	71.545	Ursus_maritimus
ENSRNOG00000042740	Mrpl42	84	78.814	ENSVPAG00000007658	MRPL42	100	78.814	Vicugna_pacos
ENSRNOG00000042740	Mrpl42	55	75.641	ENSVVUG00000002834	-	96	75.641	Vulpes_vulpes
ENSRNOG00000042740	Mrpl42	99	78.417	ENSVVUG00000011842	-	98	78.417	Vulpes_vulpes
ENSRNOG00000042740	Mrpl42	52	83.562	ENSVVUG00000007253	-	94	83.562	Vulpes_vulpes
ENSRNOG00000042740	Mrpl42	69	58.763	ENSXMAG00000004057	mrpl42	74	58.763	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component