EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000043503 (Gene tree)
Gene ID: 293692
Gene Symbol: Ehd1
Alias: LOC293692|RGD1306960
Full Name: EH-domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 22373 bases
Position: chr1:221644867-221667239
Accession: 1309017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000051714	MMR_HSR1	PF01926.23	7.1e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000054830	-	3232	-	ENSRNOP00000051714	534 (aa)	-	Q641Z6

Gene Model

Click here to download ENSRNOG00000043503's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000043503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000043503	Ehd1	99	86.842	ENSRNOG00000007744	Ehd3	99	86.842
ENSRNOG00000043503	Ehd1	99	74.953	ENSRNOG00000007584	Ehd4	99	74.953
ENSRNOG00000043503	Ehd1	100	69.944	ENSRNOG00000011346	Ehd2	99	69.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000043503	Ehd1	100	99.438	ENSG00000110047	EHD1	100	100.000	Homo_sapiens
ENSRNOG00000043503	Ehd1	97	87.885	ENSAPOG00000013440	ehd1a	98	87.885	Acanthochromis_polyacanthus
ENSRNOG00000043503	Ehd1	100	99.251	ENSAMEG00000017785	EHD1	96	99.251	Ailuropoda_melanoleuca
ENSRNOG00000043503	Ehd1	97	87.500	ENSACIG00000022182	ehd1a	98	87.500	Amphilophus_citrinellus
ENSRNOG00000043503	Ehd1	97	87.885	ENSAOCG00000016322	ehd1a	98	87.885	Amphiprion_ocellaris
ENSRNOG00000043503	Ehd1	97	87.885	ENSAPEG00000010363	ehd1a	98	87.885	Amphiprion_percula
ENSRNOG00000043503	Ehd1	97	88.269	ENSATEG00000013980	ehd1a	98	88.269	Anabas_testudineus
ENSRNOG00000043503	Ehd1	100	99.251	ENSANAG00000034810	EHD1	100	99.251	Aotus_nancymaae
ENSRNOG00000043503	Ehd1	97	87.692	ENSACLG00000016016	ehd1a	98	87.692	Astatotilapia_calliptera
ENSRNOG00000043503	Ehd1	100	85.768	ENSAMXG00000039344	ehd1a	99	85.768	Astyanax_mexicanus
ENSRNOG00000043503	Ehd1	100	82.959	ENSAMXG00000031892	-	100	82.959	Astyanax_mexicanus
ENSRNOG00000043503	Ehd1	100	98.689	ENSBTAG00000050712	EHD1	100	98.689	Bos_taurus
ENSRNOG00000043503	Ehd1	99	67.222	WBGene00004373	rme-1	97	67.222	Caenorhabditis_elegans
ENSRNOG00000043503	Ehd1	100	99.064	ENSCJAG00000002660	EHD1	100	99.064	Callithrix_jacchus
ENSRNOG00000043503	Ehd1	81	99.309	ENSCAFG00000014128	EHD1	92	99.309	Canis_familiaris
ENSRNOG00000043503	Ehd1	100	99.813	ENSCAFG00020014846	EHD1	100	99.813	Canis_lupus_dingo
ENSRNOG00000043503	Ehd1	100	98.689	ENSCHIG00000020707	-	100	98.689	Capra_hircus
ENSRNOG00000043503	Ehd1	100	99.625	ENSCPOG00000008157	EHD1	100	99.625	Cavia_porcellus
ENSRNOG00000043503	Ehd1	100	99.251	ENSCCAG00000004590	EHD1	100	99.251	Cebus_capucinus
ENSRNOG00000043503	Ehd1	100	99.251	ENSCATG00000010658	EHD1	97	99.251	Cercocebus_atys
ENSRNOG00000043503	Ehd1	100	99.625	ENSCLAG00000016412	EHD1	100	99.625	Chinchilla_lanigera
ENSRNOG00000043503	Ehd1	100	99.438	ENSCSAG00000007397	EHD1	100	99.438	Chlorocebus_sabaeus
ENSRNOG00000043503	Ehd1	99	93.182	ENSCPBG00000023692	EHD1	99	93.182	Chrysemys_picta_bellii
ENSRNOG00000043503	Ehd1	100	99.438	ENSCANG00000042123	EHD1	100	99.438	Colobus_angolensis_palliatus
ENSRNOG00000043503	Ehd1	100	99.625	ENSCGRG00001019701	Ehd1	100	99.625	Cricetulus_griseus_chok1gshd
ENSRNOG00000043503	Ehd1	94	98.214	ENSCGRG00000000662	Ehd1	100	98.214	Cricetulus_griseus_crigri
ENSRNOG00000043503	Ehd1	97	85.577	ENSCSEG00000006078	ehd1a	98	85.577	Cynoglossus_semilaevis
ENSRNOG00000043503	Ehd1	97	88.077	ENSCVAG00000012152	ehd1a	98	88.077	Cyprinodon_variegatus
ENSRNOG00000043503	Ehd1	99	84.774	ENSDARG00000098853	ehd1a	99	84.774	Danio_rerio
ENSRNOG00000043503	Ehd1	99	86.492	ENSDARG00000014793	ehd1b	100	86.492	Danio_rerio
ENSRNOG00000043503	Ehd1	67	99.444	ENSDNOG00000017834	EHD1	96	99.444	Dasypus_novemcinctus
ENSRNOG00000043503	Ehd1	100	99.625	ENSDORG00000030186	Ehd1	100	99.625	Dipodomys_ordii
ENSRNOG00000043503	Ehd1	99	68.411	FBgn0016693	Past1	99	68.411	Drosophila_melanogaster
ENSRNOG00000043503	Ehd1	58	81.090	ENSEBUG00000010829	EHD1	90	81.090	Eptatretus_burgeri
ENSRNOG00000043503	Ehd1	99	78.464	ENSEBUG00000009968	EHD1	99	78.464	Eptatretus_burgeri
ENSRNOG00000043503	Ehd1	100	99.251	ENSEASG00005018250	EHD1	100	99.251	Equus_asinus_asinus
ENSRNOG00000043503	Ehd1	100	99.251	ENSECAG00000011638	EHD1	100	99.251	Equus_caballus
ENSRNOG00000043503	Ehd1	99	86.742	ENSELUG00000016093	ehd1b	99	86.742	Esox_lucius
ENSRNOG00000043503	Ehd1	99	85.633	ENSELUG00000007973	-	99	85.633	Esox_lucius
ENSRNOG00000043503	Ehd1	100	99.438	ENSFCAG00000027734	EHD1	97	99.438	Felis_catus
ENSRNOG00000043503	Ehd1	100	99.064	ENSFDAG00000007697	EHD1	100	99.064	Fukomys_damarensis
ENSRNOG00000043503	Ehd1	97	88.269	ENSFHEG00000002690	ehd1a	98	88.269	Fundulus_heteroclitus
ENSRNOG00000043503	Ehd1	97	86.538	ENSGMOG00000012192	ehd1a	99	86.538	Gadus_morhua
ENSRNOG00000043503	Ehd1	97	88.462	ENSGAFG00000000730	ehd1a	98	88.462	Gambusia_affinis
ENSRNOG00000043503	Ehd1	97	87.115	ENSGACG00000017605	ehd1a	98	87.115	Gasterosteus_aculeatus
ENSRNOG00000043503	Ehd1	100	94.382	ENSGAGG00000001677	-	92	94.382	Gopherus_agassizii
ENSRNOG00000043503	Ehd1	97	87.692	ENSHBUG00000012087	ehd1a	98	87.692	Haplochromis_burtoni
ENSRNOG00000043503	Ehd1	100	99.438	ENSHGLG00000010254	EHD1	100	99.438	Heterocephalus_glaber_female
ENSRNOG00000043503	Ehd1	100	99.438	ENSHGLG00100014206	EHD1	100	99.438	Heterocephalus_glaber_male
ENSRNOG00000043503	Ehd1	97	87.500	ENSHCOG00000006825	ehd1a	98	87.500	Hippocampus_comes
ENSRNOG00000043503	Ehd1	100	85.768	ENSIPUG00000002819	ehd1a	99	85.768	Ictalurus_punctatus
ENSRNOG00000043503	Ehd1	100	83.333	ENSIPUG00000017390	EHD1	99	83.647	Ictalurus_punctatus
ENSRNOG00000043503	Ehd1	100	99.625	ENSSTOG00000009829	EHD1	100	99.625	Ictidomys_tridecemlineatus
ENSRNOG00000043503	Ehd1	100	99.438	ENSJJAG00000022299	Ehd1	100	99.438	Jaculus_jaculus
ENSRNOG00000043503	Ehd1	97	87.115	ENSKMAG00000004764	ehd1a	98	87.115	Kryptolebias_marmoratus
ENSRNOG00000043503	Ehd1	97	87.692	ENSLBEG00000004390	ehd1a	98	87.692	Labrus_bergylta
ENSRNOG00000043503	Ehd1	100	89.552	ENSLACG00000018148	EHD1	100	89.552	Latimeria_chalumnae
ENSRNOG00000043503	Ehd1	99	81.733	ENSLOCG00000000924	ehd1b	96	81.733	Lepisosteus_oculatus
ENSRNOG00000043503	Ehd1	100	95.318	ENSLAFG00000011643	EHD1	100	95.318	Loxodonta_africana
ENSRNOG00000043503	Ehd1	100	99.438	ENSMFAG00000032608	EHD1	100	99.438	Macaca_fascicularis
ENSRNOG00000043503	Ehd1	100	99.438	ENSMMUG00000003972	EHD1	97	99.438	Macaca_mulatta
ENSRNOG00000043503	Ehd1	100	99.438	ENSMNEG00000031673	EHD1	100	99.438	Macaca_nemestrina
ENSRNOG00000043503	Ehd1	100	99.438	ENSMLEG00000031992	EHD1	100	99.438	Mandrillus_leucophaeus
ENSRNOG00000043503	Ehd1	97	87.692	ENSMAMG00000021737	ehd1a	98	87.692	Mastacembelus_armatus
ENSRNOG00000043503	Ehd1	97	87.692	ENSMZEG00005004305	ehd1a	98	87.692	Maylandia_zebra
ENSRNOG00000043503	Ehd1	100	99.625	ENSMAUG00000013823	Ehd1	100	99.625	Mesocricetus_auratus
ENSRNOG00000043503	Ehd1	100	99.251	ENSMICG00000001239	EHD1	99	98.871	Microcebus_murinus
ENSRNOG00000043503	Ehd1	100	99.625	ENSMOCG00000015517	Ehd1	100	99.625	Microtus_ochrogaster
ENSRNOG00000043503	Ehd1	98	87.332	ENSMMOG00000003005	ehd1a	98	87.332	Mola_mola
ENSRNOG00000043503	Ehd1	97	87.885	ENSMALG00000012679	ehd1a	98	87.885	Monopterus_albus
ENSRNOG00000043503	Ehd1	100	100.000	MGP_CAROLIEiJ_G0022603	Ehd1	100	100.000	Mus_caroli
ENSRNOG00000043503	Ehd1	100	100.000	ENSMUSG00000024772	Ehd1	100	100.000	Mus_musculus
ENSRNOG00000043503	Ehd1	100	99.813	MGP_PahariEiJ_G0014097	Ehd1	100	99.813	Mus_pahari
ENSRNOG00000043503	Ehd1	100	100.000	MGP_SPRETEiJ_G0023514	Ehd1	100	100.000	Mus_spretus
ENSRNOG00000043503	Ehd1	100	99.625	ENSMPUG00000012497	EHD1	100	99.625	Mustela_putorius_furo
ENSRNOG00000043503	Ehd1	100	99.813	ENSNGAG00000020358	Ehd1	100	99.813	Nannospalax_galili
ENSRNOG00000043503	Ehd1	97	87.500	ENSNBRG00000002933	ehd1a	98	87.500	Neolamprologus_brichardi
ENSRNOG00000043503	Ehd1	100	99.438	ENSNLEG00000005375	EHD1	100	99.438	Nomascus_leucogenys
ENSRNOG00000043503	Ehd1	100	98.689	ENSOPRG00000011350	EHD1	100	98.689	Ochotona_princeps
ENSRNOG00000043503	Ehd1	100	99.438	ENSODEG00000014527	EHD1	100	99.438	Octodon_degus
ENSRNOG00000043503	Ehd1	61	99.691	ENSOCUG00000029532	EHD1	96	99.691	Oryctolagus_cuniculus
ENSRNOG00000043503	Ehd1	97	87.308	ENSORLG00000022561	ehd1a	98	87.308	Oryzias_latipes
ENSRNOG00000043503	Ehd1	97	87.115	ENSORLG00020018451	ehd1a	98	87.115	Oryzias_latipes_hni
ENSRNOG00000043503	Ehd1	97	87.115	ENSORLG00015017672	ehd1a	98	87.115	Oryzias_latipes_hsok
ENSRNOG00000043503	Ehd1	97	87.692	ENSOMEG00000019329	ehd1a	98	87.692	Oryzias_melastigma
ENSRNOG00000043503	Ehd1	100	99.438	ENSOGAG00000009351	EHD1	100	99.438	Otolemur_garnettii
ENSRNOG00000043503	Ehd1	91	98.361	ENSOARG00000010447	EHD1	99	98.361	Ovis_aries
ENSRNOG00000043503	Ehd1	100	99.438	ENSPPAG00000037178	EHD1	100	99.438	Pan_paniscus
ENSRNOG00000043503	Ehd1	100	97.191	ENSPPRG00000006031	EHD1	97	97.191	Panthera_pardus
ENSRNOG00000043503	Ehd1	100	99.438	ENSPTRG00000003851	EHD1	97	99.438	Pan_troglodytes
ENSRNOG00000043503	Ehd1	100	99.438	ENSPANG00000023358	EHD1	97	99.438	Papio_anubis
ENSRNOG00000043503	Ehd1	67	88.333	ENSPKIG00000020297	-	88	88.333	Paramormyrops_kingsleyae
ENSRNOG00000043503	Ehd1	98	86.260	ENSPKIG00000023165	-	99	86.260	Paramormyrops_kingsleyae
ENSRNOG00000043503	Ehd1	100	94.757	ENSPSIG00000005727	EHD1	100	94.757	Pelodiscus_sinensis
ENSRNOG00000043503	Ehd1	99	85.822	ENSPMGG00000017810	ehd1a	98	85.988	Periophthalmus_magnuspinnatus
ENSRNOG00000043503	Ehd1	100	99.813	ENSPEMG00000010917	Ehd1	100	99.813	Peromyscus_maniculatus_bairdii
ENSRNOG00000043503	Ehd1	73	71.538	ENSPCIG00000017053	-	96	71.538	Phascolarctos_cinereus
ENSRNOG00000043503	Ehd1	100	97.566	ENSPCIG00000014850	EHD1	100	97.566	Phascolarctos_cinereus
ENSRNOG00000043503	Ehd1	97	88.269	ENSPFOG00000010613	ehd1a	97	88.269	Poecilia_formosa
ENSRNOG00000043503	Ehd1	97	88.269	ENSPLAG00000023296	ehd1a	98	88.269	Poecilia_latipinna
ENSRNOG00000043503	Ehd1	97	88.269	ENSPMEG00000003397	ehd1a	98	88.269	Poecilia_mexicana
ENSRNOG00000043503	Ehd1	97	88.077	ENSPREG00000015893	ehd1a	98	88.077	Poecilia_reticulata
ENSRNOG00000043503	Ehd1	100	99.438	ENSPPYG00000003093	EHD1	100	99.438	Pongo_abelii
ENSRNOG00000043503	Ehd1	100	99.625	ENSPCOG00000010309	EHD1	99	99.625	Propithecus_coquereli
ENSRNOG00000043503	Ehd1	100	98.689	ENSPVAG00000007890	EHD1	100	98.689	Pteropus_vampyrus
ENSRNOG00000043503	Ehd1	97	87.692	ENSPNYG00000015448	ehd1a	98	87.692	Pundamilia_nyererei
ENSRNOG00000043503	Ehd1	100	85.581	ENSPNAG00000023091	ehd1a	99	85.581	Pygocentrus_nattereri
ENSRNOG00000043503	Ehd1	99	85.876	ENSPNAG00000007408	EHD1	99	85.876	Pygocentrus_nattereri
ENSRNOG00000043503	Ehd1	100	99.438	ENSRBIG00000039111	EHD1	100	99.438	Rhinopithecus_bieti
ENSRNOG00000043503	Ehd1	100	99.438	ENSRROG00000026366	EHD1	100	99.438	Rhinopithecus_roxellana
ENSRNOG00000043503	Ehd1	100	99.251	ENSSBOG00000023399	EHD1	100	99.251	Saimiri_boliviensis_boliviensis
ENSRNOG00000043503	Ehd1	75	71.820	ENSSHAG00000007430	-	95	70.218	Sarcophilus_harrisii
ENSRNOG00000043503	Ehd1	92	87.321	ENSSFOG00015019587	EHD1	100	87.321	Scleropages_formosus
ENSRNOG00000043503	Ehd1	100	86.891	ENSSFOG00015006481	-	99	86.891	Scleropages_formosus
ENSRNOG00000043503	Ehd1	97	87.308	ENSSMAG00000018210	ehd1a	98	87.308	Scophthalmus_maximus
ENSRNOG00000043503	Ehd1	97	88.462	ENSSDUG00000016436	ehd1a	98	88.462	Seriola_dumerili
ENSRNOG00000043503	Ehd1	97	88.462	ENSSLDG00000015328	ehd1a	98	88.462	Seriola_lalandi_dorsalis
ENSRNOG00000043503	Ehd1	97	88.077	ENSSPAG00000008682	ehd1a	98	88.077	Stegastes_partitus
ENSRNOG00000043503	Ehd1	99	98.872	ENSSSCG00000013017	EHD1	99	98.872	Sus_scrofa
ENSRNOG00000043503	Ehd1	97	87.885	ENSTRUG00000025890	ehd1a	98	87.885	Takifugu_rubripes
ENSRNOG00000043503	Ehd1	97	87.115	ENSTNIG00000016792	ehd1a	97	87.115	Tetraodon_nigroviridis
ENSRNOG00000043503	Ehd1	78	90.408	ENSTBEG00000007057	EHD1	100	90.408	Tupaia_belangeri
ENSRNOG00000043503	Ehd1	100	98.876	ENSTTRG00000008887	EHD1	100	98.876	Tursiops_truncatus
ENSRNOG00000043503	Ehd1	100	99.813	ENSUAMG00000012071	EHD1	100	99.813	Ursus_americanus
ENSRNOG00000043503	Ehd1	98	97.143	ENSUMAG00000007890	EHD1	99	97.143	Ursus_maritimus
ENSRNOG00000043503	Ehd1	100	99.813	ENSVVUG00000027552	EHD1	84	99.813	Vulpes_vulpes
ENSRNOG00000043503	Ehd1	100	91.386	ENSXETG00000001638	ehd1	100	91.386	Xenopus_tropicalis
ENSRNOG00000043503	Ehd1	99	87.170	ENSXCOG00000001781	ehd1a	98	87.170	Xiphophorus_couchianus
ENSRNOG00000043503	Ehd1	97	88.269	ENSXMAG00000005301	ehd1a	98	88.269	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005515	protein binding	11423532.15371016.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005768	endosome	-	ISO	Component
GO:0005769	early endosome	-	ISO	Component
GO:0005811	lipid droplet	-	IEA	Component
GO:0005811	lipid droplet	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005886	plasma membrane	-	ISS	Component
GO:0006886	intracellular protein transport	-	ISO	Process
GO:0006886	intracellular protein transport	-	ISS	Process
GO:0006897	endocytosis	-	ISO	Process
GO:0006897	endocytosis	-	ISS	Process
GO:0010008	endosome membrane	23572513.	IDA	Component
GO:0010886	positive regulation of cholesterol storage	-	IEA	Process
GO:0010886	positive regulation of cholesterol storage	-	ISO	Process
GO:0010976	positive regulation of neuron projection development	23572513.	IMP	Process
GO:0016197	endosomal transport	-	ISO	Process
GO:0017137	Rab GTPase binding	-	ISO	Function
GO:0020018	ciliary pocket membrane	-	ISO	Component
GO:0020018	ciliary pocket membrane	-	ISS	Component
GO:0030139	endocytic vesicle	-	IEA	Component
GO:0030139	endocytic vesicle	-	ISO	Component
GO:0031095	platelet dense tubular network membrane	-	IEA	Component
GO:0031095	platelet dense tubular network membrane	-	ISO	Component
GO:0031175	neuron projection development	23572513.	IMP	Process
GO:0031901	early endosome membrane	-	ISO	Component
GO:0031901	early endosome membrane	-	ISS	Component
GO:0032456	endocytic recycling	-	ISO	Process
GO:0032456	endocytic recycling	-	ISS	Process
GO:0034383	low-density lipoprotein particle clearance	-	IEA	Process
GO:0034383	low-density lipoprotein particle clearance	-	ISO	Process
GO:0042632	cholesterol homeostasis	-	IEA	Process
GO:0042632	cholesterol homeostasis	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0051260	protein homooligomerization	-	ISO	Process
GO:0055038	recycling endosome membrane	-	ISO	Component
GO:0055038	recycling endosome membrane	-	ISS	Component
GO:0060271	cilium assembly	-	ISO	Process
GO:0060271	cilium assembly	-	ISS	Process
GO:0061512	protein localization to cilium	-	ISO	Process
GO:0061512	protein localization to cilium	-	ISS	Process
GO:1901741	positive regulation of myoblast fusion	-	ISO	Process
GO:1901741	positive regulation of myoblast fusion	-	ISS	Process
GO:1990090	cellular response to nerve growth factor stimulus	23572513.	IDA	Process
GO:2001137	positive regulation of endocytic recycling	-	ISO	Process
GO:2001137	positive regulation of endocytic recycling	-	ISS	Process