EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000045621 (Gene tree)
Gene ID: 360821
Gene Symbol: Gatc
Alias: LOC360821|RGD1309698
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5362 bases
Position: chr12:47031595-47036956
Accession: 1309698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000063917	Glu-tRNAGln	PF02686.15	7.1e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000070868	-	459	XM_008769339	ENSRNOP00000063917	153 (aa)	XP_008767561	M0R3K2

Gene Model

Click here to download ENSRNOG00000045621's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00970	Aminoacyl-tRNA biosynthesis	KEGG
rno01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000045621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000045621	Gatc	92	98.582	ENSRNOG00000001161	Gatc	91	98.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000045621	Gatc	92	62.143	ENSG00000257218	GATC	96	80.000	Homo_sapiens
ENSRNOG00000045621	Gatc	92	61.429	ENSAMEG00000013298	-	90	61.429	Ailuropoda_melanoleuca
ENSRNOG00000045621	Gatc	59	66.667	ENSACIG00000016853	gatc	65	66.667	Amphilophus_citrinellus
ENSRNOG00000045621	Gatc	61	63.441	ENSAOCG00000014641	gatc	74	63.441	Amphiprion_ocellaris
ENSRNOG00000045621	Gatc	59	64.444	ENSATEG00000009237	gatc	74	64.444	Anabas_testudineus
ENSRNOG00000045621	Gatc	64	63.265	ENSACAG00000002868	-	73	63.265	Anolis_carolinensis
ENSRNOG00000045621	Gatc	92	62.411	ENSANAG00000034389	-	90	62.411	Aotus_nancymaae
ENSRNOG00000045621	Gatc	61	65.591	ENSAMXG00000004252	gatc	62	54.074	Astyanax_mexicanus
ENSRNOG00000045621	Gatc	92	59.286	ENSBTAG00000012791	GATC	90	59.286	Bos_taurus
ENSRNOG00000045621	Gatc	73	36.036	WBGene00013433	Y66D12A.7	62	36.036	Caenorhabditis_elegans
ENSRNOG00000045621	Gatc	92	61.702	ENSCJAG00000001183	-	68	61.702	Callithrix_jacchus
ENSRNOG00000045621	Gatc	92	62.143	ENSCAFG00000010311	-	90	62.143	Canis_familiaris
ENSRNOG00000045621	Gatc	92	62.143	ENSCAFG00020020606	-	90	62.143	Canis_lupus_dingo
ENSRNOG00000045621	Gatc	92	59.286	ENSCHIG00000019423	-	90	59.286	Capra_hircus
ENSRNOG00000045621	Gatc	92	62.857	ENSTSYG00000006845	-	90	62.857	Carlito_syrichta
ENSRNOG00000045621	Gatc	91	66.187	ENSCPOG00000026436	-	95	66.187	Cavia_porcellus
ENSRNOG00000045621	Gatc	92	61.702	ENSCCAG00000022235	-	90	61.702	Cebus_capucinus
ENSRNOG00000045621	Gatc	92	60.714	ENSCATG00000038807	GATC	90	60.714	Cercocebus_atys
ENSRNOG00000045621	Gatc	95	61.333	ENSCLAG00000011015	-	94	61.333	Chinchilla_lanigera
ENSRNOG00000045621	Gatc	92	61.429	ENSCSAG00000002259	GATC	90	61.429	Chlorocebus_sabaeus
ENSRNOG00000045621	Gatc	92	63.571	ENSCHOG00000009235	-	90	63.571	Choloepus_hoffmanni
ENSRNOG00000045621	Gatc	75	58.261	ENSCPBG00000011342	-	61	58.261	Chrysemys_picta_bellii
ENSRNOG00000045621	Gatc	92	60.000	ENSCANG00000031071	GATC	90	60.000	Colobus_angolensis_palliatus
ENSRNOG00000045621	Gatc	90	73.188	ENSCGRG00001005508	-	68	73.188	Cricetulus_griseus_chok1gshd
ENSRNOG00000045621	Gatc	92	75.714	ENSCGRG00001019220	-	90	75.714	Cricetulus_griseus_chok1gshd
ENSRNOG00000045621	Gatc	90	73.913	ENSCGRG00000019471	GATC	68	73.913	Cricetulus_griseus_crigri
ENSRNOG00000045621	Gatc	92	75.714	ENSCGRG00000004184	-	90	75.714	Cricetulus_griseus_crigri
ENSRNOG00000045621	Gatc	61	53.191	ENSCSEG00000016618	-	55	53.191	Cynoglossus_semilaevis
ENSRNOG00000045621	Gatc	61	67.742	ENSDARG00000056855	gatc	51	67.742	Danio_rerio
ENSRNOG00000045621	Gatc	91	66.187	ENSDNOG00000012593	-	84	66.187	Dasypus_novemcinctus
ENSRNOG00000045621	Gatc	76	37.069	FBgn0064115	GatC	74	37.069	Drosophila_melanogaster
ENSRNOG00000045621	Gatc	92	52.143	ENSETEG00000002604	-	90	52.143	Echinops_telfairi
ENSRNOG00000045621	Gatc	59	53.846	ENSEBUG00000008772	gatc	52	53.846	Eptatretus_burgeri
ENSRNOG00000045621	Gatc	92	62.143	ENSECAG00000011118	-	90	62.143	Equus_caballus
ENSRNOG00000045621	Gatc	92	58.571	ENSEEUG00000011638	-	90	58.571	Erinaceus_europaeus
ENSRNOG00000045621	Gatc	61	62.366	ENSELUG00000012608	gatc	68	62.366	Esox_lucius
ENSRNOG00000045621	Gatc	92	58.571	ENSFCAG00000038718	-	90	58.571	Felis_catus
ENSRNOG00000045621	Gatc	93	52.113	ENSFALG00000007564	-	86	52.113	Ficedula_albicollis
ENSRNOG00000045621	Gatc	92	58.571	ENSFDAG00000018720	-	90	58.571	Fukomys_damarensis
ENSRNOG00000045621	Gatc	61	60.215	ENSFHEG00000014992	GATC	50	60.215	Fundulus_heteroclitus
ENSRNOG00000045621	Gatc	68	54.630	ENSGMOG00000008742	gatc	67	54.630	Gadus_morhua
ENSRNOG00000045621	Gatc	61	61.702	ENSGALG00000007195	-	81	55.263	Gallus_gallus
ENSRNOG00000045621	Gatc	63	61.856	ENSGAFG00000012801	gatc	61	61.856	Gambusia_affinis
ENSRNOG00000045621	Gatc	75	60.000	ENSGAGG00000016018	-	63	60.000	Gopherus_agassizii
ENSRNOG00000045621	Gatc	90	62.319	ENSGGOG00000026821	GATC	93	62.319	Gorilla_gorilla
ENSRNOG00000045621	Gatc	92	61.429	ENSHGLG00000011394	GATC	90	61.429	Heterocephalus_glaber_female
ENSRNOG00000045621	Gatc	93	58.621	ENSHGLG00100018850	-	93	58.621	Heterocephalus_glaber_male
ENSRNOG00000045621	Gatc	65	59.406	ENSHCOG00000009209	gatc	80	59.406	Hippocampus_comes
ENSRNOG00000045621	Gatc	92	63.571	ENSSTOG00000025740	-	80	63.571	Ictidomys_tridecemlineatus
ENSRNOG00000045621	Gatc	92	65.278	ENSJJAG00000000369	Gatc	91	65.278	Jaculus_jaculus
ENSRNOG00000045621	Gatc	59	65.556	ENSKMAG00000016476	gatc	68	65.556	Kryptolebias_marmoratus
ENSRNOG00000045621	Gatc	74	60.177	ENSLBEG00000007603	gatc	61	60.177	Labrus_bergylta
ENSRNOG00000045621	Gatc	85	49.242	ENSLACG00000018239	-	68	49.242	Latimeria_chalumnae
ENSRNOG00000045621	Gatc	61	63.441	ENSLOCG00000004056	gatc	50	63.441	Lepisosteus_oculatus
ENSRNOG00000045621	Gatc	91	65.468	ENSLAFG00000006384	-	90	65.468	Loxodonta_africana
ENSRNOG00000045621	Gatc	92	60.714	ENSMFAG00000034197	GATC	90	60.714	Macaca_fascicularis
ENSRNOG00000045621	Gatc	92	60.714	ENSMMUG00000046665	GATC	90	60.714	Macaca_mulatta
ENSRNOG00000045621	Gatc	92	60.714	ENSMNEG00000034653	GATC	90	60.714	Macaca_nemestrina
ENSRNOG00000045621	Gatc	92	61.429	ENSMLEG00000039862	GATC	90	61.429	Mandrillus_leucophaeus
ENSRNOG00000045621	Gatc	61	64.516	ENSMAMG00000015851	gatc	51	64.516	Mastacembelus_armatus
ENSRNOG00000045621	Gatc	61	61.702	ENSMGAG00000008733	-	87	61.957	Meleagris_gallopavo
ENSRNOG00000045621	Gatc	92	77.143	ENSMAUG00000012756	Gatc	90	77.143	Mesocricetus_auratus
ENSRNOG00000045621	Gatc	92	65.000	ENSMICG00000008669	-	90	65.000	Microcebus_murinus
ENSRNOG00000045621	Gatc	92	75.000	ENSMOCG00000005051	Gatc	90	75.000	Microtus_ochrogaster
ENSRNOG00000045621	Gatc	73	51.724	ENSMMOG00000017695	gatc	78	56.989	Mola_mola
ENSRNOG00000045621	Gatc	63	68.367	ENSMODG00000003152	-	74	68.367	Monodelphis_domestica
ENSRNOG00000045621	Gatc	92	84.286	MGP_CAROLIEiJ_G0027623	Gatc	90	84.286	Mus_caroli
ENSRNOG00000045621	Gatc	92	84.286	ENSMUSG00000029536	Gatc	90	84.286	Mus_musculus
ENSRNOG00000045621	Gatc	92	83.688	MGP_PahariEiJ_G0024203	Gatc	91	83.688	Mus_pahari
ENSRNOG00000045621	Gatc	92	83.571	MGP_SPRETEiJ_G0028621	Gatc	90	83.571	Mus_spretus
ENSRNOG00000045621	Gatc	92	62.143	ENSMPUG00000003183	-	90	62.143	Mustela_putorius_furo
ENSRNOG00000045621	Gatc	57	79.310	ENSMLUG00000010341	-	86	79.310	Myotis_lucifugus
ENSRNOG00000045621	Gatc	96	64.667	ENSNGAG00000004734	Gatc	97	64.667	Nannospalax_galili
ENSRNOG00000045621	Gatc	92	58.571	ENSNLEG00000015651	GATC	90	58.571	Nomascus_leucogenys
ENSRNOG00000045621	Gatc	65	69.000	ENSMEUG00000004064	-	80	69.000	Notamacropus_eugenii
ENSRNOG00000045621	Gatc	92	60.284	ENSOPRG00000004226	-	90	60.284	Ochotona_princeps
ENSRNOG00000045621	Gatc	91	61.151	ENSODEG00000005919	-	92	61.151	Octodon_degus
ENSRNOG00000045621	Gatc	60	61.702	ENSONIG00000013444	gatc	65	61.702	Oreochromis_niloticus
ENSRNOG00000045621	Gatc	90	66.667	ENSOCUG00000009867	-	89	66.667	Oryctolagus_cuniculus
ENSRNOG00000045621	Gatc	61	59.140	ENSORLG00000007156	gatc	76	64.286	Oryzias_latipes
ENSRNOG00000045621	Gatc	61	60.215	ENSOMEG00000002280	gatc	50	60.215	Oryzias_melastigma
ENSRNOG00000045621	Gatc	63	75.000	ENSOGAG00000003850	-	88	75.000	Otolemur_garnettii
ENSRNOG00000045621	Gatc	67	71.569	ENSOARG00000012338	-	79	71.569	Ovis_aries
ENSRNOG00000045621	Gatc	92	62.143	ENSPPAG00000029164	GATC	90	62.143	Pan_paniscus
ENSRNOG00000045621	Gatc	92	60.000	ENSPPRG00000000929	-	90	60.000	Panthera_pardus
ENSRNOG00000045621	Gatc	92	60.000	ENSPTIG00000009889	-	90	60.000	Panthera_tigris_altaica
ENSRNOG00000045621	Gatc	92	62.857	ENSPTRG00000049887	GATC	90	62.857	Pan_troglodytes
ENSRNOG00000045621	Gatc	92	60.714	ENSPANG00000033975	GATC	90	60.714	Papio_anubis
ENSRNOG00000045621	Gatc	65	61.616	ENSPSIG00000011112	-	83	61.616	Pelodiscus_sinensis
ENSRNOG00000045621	Gatc	58	64.773	ENSPMGG00000018829	gatc	56	64.773	Periophthalmus_magnuspinnatus
ENSRNOG00000045621	Gatc	92	77.305	ENSPEMG00000000665	Gatc	91	77.305	Peromyscus_maniculatus_bairdii
ENSRNOG00000045621	Gatc	90	56.338	ENSPCIG00000025999	-	91	56.338	Phascolarctos_cinereus
ENSRNOG00000045621	Gatc	65	60.606	ENSPFOG00000011603	gatc	53	60.606	Poecilia_formosa
ENSRNOG00000045621	Gatc	65	59.596	ENSPLAG00000002471	gatc	53	59.596	Poecilia_latipinna
ENSRNOG00000045621	Gatc	65	59.596	ENSPMEG00000020958	gatc	53	59.596	Poecilia_mexicana
ENSRNOG00000045621	Gatc	64	61.224	ENSPREG00000022256	gatc	78	56.780	Poecilia_reticulata
ENSRNOG00000045621	Gatc	92	60.714	ENSPPYG00000005030	GATC	90	60.714	Pongo_abelii
ENSRNOG00000045621	Gatc	92	60.714	ENSPCAG00000013864	-	90	60.714	Procavia_capensis
ENSRNOG00000045621	Gatc	88	62.222	ENSPCOG00000015558	-	91	62.222	Propithecus_coquereli
ENSRNOG00000045621	Gatc	91	66.187	ENSPCOG00000009493	-	94	66.187	Propithecus_coquereli
ENSRNOG00000045621	Gatc	92	58.571	ENSPVAG00000002228	-	90	58.571	Pteropus_vampyrus
ENSRNOG00000045621	Gatc	92	59.286	ENSRBIG00000033363	GATC	90	59.286	Rhinopithecus_bieti
ENSRNOG00000045621	Gatc	92	59.286	ENSRROG00000042802	GATC	90	59.286	Rhinopithecus_roxellana
ENSRNOG00000045621	Gatc	92	61.702	ENSSBOG00000033750	-	90	61.702	Saimiri_boliviensis_boliviensis
ENSRNOG00000045621	Gatc	60	69.565	ENSSHAG00000005745	-	87	69.565	Sarcophilus_harrisii
ENSRNOG00000045621	Gatc	86	46.715	ENSSFOG00015002508	gatc	87	46.715	Scleropages_formosus
ENSRNOG00000045621	Gatc	61	64.516	ENSSMAG00000014280	gatc	52	64.516	Scophthalmus_maximus
ENSRNOG00000045621	Gatc	79	56.452	ENSSPUG00000015693	-	83	57.895	Sphenodon_punctatus
ENSRNOG00000045621	Gatc	91	60.432	ENSSSCG00000032747	-	88	60.432	Sus_scrofa
ENSRNOG00000045621	Gatc	61	65.591	ENSTGUG00000009561	-	86	65.591	Taeniopygia_guttata
ENSRNOG00000045621	Gatc	68	57.273	ENSTRUG00000021596	gatc	56	57.273	Takifugu_rubripes
ENSRNOG00000045621	Gatc	92	61.429	ENSTTRG00000000144	GATC	90	61.429	Tursiops_truncatus
ENSRNOG00000045621	Gatc	92	61.429	ENSUAMG00000015523	-	90	61.429	Ursus_americanus
ENSRNOG00000045621	Gatc	92	61.429	ENSVVUG00000021055	-	90	61.429	Vulpes_vulpes
ENSRNOG00000045621	Gatc	61	62.366	ENSXCOG00000017087	gatc	68	62.366	Xiphophorus_couchianus
ENSRNOG00000045621	Gatc	70	57.009	ENSXMAG00000018267	gatc	55	57.009	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006450	regulation of translational fidelity	-	IEA	Process
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	-	IEA	Component
GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex	-	ISO	Component
GO:0032543	mitochondrial translation	-	IEA	Process
GO:0032543	mitochondrial translation	-	ISO	Process
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	-	IEA	Function
GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	-	ISO	Function
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	-	IEA	Process
GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation	-	ISO	Process