EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000045785 (Gene tree)
Gene ID: 100359687
Gene Symbol: LOC100359687
Alias: -
Full Name: mitochondrial ribosomal protein L1-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 90159 bases
Position: chr8:56411911-56502069
Accession: 2325044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000070016	Ribosomal_L1	PF00687.21	5.5e-17	1	1
ENSRNOP00000036682	Ribosomal_L1	PF00687.21	6.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000039083	-	1070	XM_003750509	ENSRNOP00000036682	328 (aa)	XP_003750557	D3ZFE9
ENSRNOT00000085278	-	939	-	ENSRNOP00000070016	312 (aa)	-	A0A0G2JWU3

Gene Model

Click here to download ENSRNOG00000045785's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000045785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000045785	LOC100359687	100	99.679	ENSRNOG00000002070	Mrpl1	98	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000045785	LOC100359687	99	74.920	ENSG00000169288	MRPL1	98	76.636	Homo_sapiens
ENSRNOG00000045785	LOC100359687	95	46.823	ENSAPOG00000005831	mrpl1	95	47.000	Acanthochromis_polyacanthus
ENSRNOG00000045785	LOC100359687	91	49.117	ENSACIG00000002298	mrpl1	94	49.296	Amphilophus_citrinellus
ENSRNOG00000045785	LOC100359687	97	45.912	ENSAOCG00000006715	mrpl1	99	45.912	Amphiprion_ocellaris
ENSRNOG00000045785	LOC100359687	82	50.781	ENSAPEG00000020020	mrpl1	87	51.154	Amphiprion_percula
ENSRNOG00000045785	LOC100359687	97	47.170	ENSATEG00000008760	mrpl1	99	47.170	Anabas_testudineus
ENSRNOG00000045785	LOC100359687	75	57.021	ENSAPLG00000003428	MRPL1	85	57.021	Anas_platyrhynchos
ENSRNOG00000045785	LOC100359687	96	47.000	ENSACAG00000012069	MRPL1	80	45.342	Anolis_carolinensis
ENSRNOG00000045785	LOC100359687	98	77.124	ENSANAG00000035463	-	96	75.633	Aotus_nancymaae
ENSRNOG00000045785	LOC100359687	98	63.725	ENSANAG00000020317	-	95	65.595	Aotus_nancymaae
ENSRNOG00000045785	LOC100359687	98	46.417	ENSACLG00000001464	mrpl1	88	46.417	Astatotilapia_calliptera
ENSRNOG00000045785	LOC100359687	85	46.992	ENSAMXG00000033077	mrpl1	74	47.431	Astyanax_mexicanus
ENSRNOG00000045785	LOC100359687	98	78.689	ENSCPOG00000031686	MRPL1	97	79.114	Cavia_porcellus
ENSRNOG00000045785	LOC100359687	100	77.460	ENSCLAG00000005041	MRPL1	98	78.193	Chinchilla_lanigera
ENSRNOG00000045785	LOC100359687	99	70.418	ENSCANG00000033966	MRPL1	98	69.159	Colobus_angolensis_palliatus
ENSRNOG00000045785	LOC100359687	98	87.055	ENSCGRG00001005376	-	99	85.231	Cricetulus_griseus_chok1gshd
ENSRNOG00000045785	LOC100359687	98	86.731	ENSCGRG00000003658	-	99	84.923	Cricetulus_griseus_crigri
ENSRNOG00000045785	LOC100359687	96	40.317	ENSCSEG00000014014	mrpl1	98	40.252	Cynoglossus_semilaevis
ENSRNOG00000045785	LOC100359687	99	45.833	ENSCVAG00000021636	mrpl1	98	45.110	Cyprinodon_variegatus
ENSRNOG00000045785	LOC100359687	96	42.812	ENSDARG00000054606	mrpl1	96	44.375	Danio_rerio
ENSRNOG00000045785	LOC100359687	98	76.636	ENSDNOG00000001665	MRPL1	97	76.947	Dasypus_novemcinctus
ENSRNOG00000045785	LOC100359687	100	77.389	ENSDORG00000015752	Mrpl1	96	77.399	Dipodomys_ordii
ENSRNOG00000045785	LOC100359687	83	34.615	ENSEBUG00000004815	mrpl1	79	34.615	Eptatretus_burgeri
ENSRNOG00000045785	LOC100359687	97	47.727	ENSELUG00000013391	mrpl1	97	47.003	Esox_lucius
ENSRNOG00000045785	LOC100359687	98	78.361	ENSFCAG00000013776	MRPL1	98	76.947	Felis_catus
ENSRNOG00000045785	LOC100359687	90	49.117	ENSFALG00000008527	MRPL1	83	53.975	Ficedula_albicollis
ENSRNOG00000045785	LOC100359687	99	76.038	ENSFDAG00000011113	MRPL1	96	77.778	Fukomys_damarensis
ENSRNOG00000045785	LOC100359687	96	46.984	ENSFHEG00000012375	mrpl1	98	46.984	Fundulus_heteroclitus
ENSRNOG00000045785	LOC100359687	92	47.020	ENSGALG00000010324	MRPL1	91	48.089	Gallus_gallus
ENSRNOG00000045785	LOC100359687	97	45.141	ENSGAFG00000006089	mrpl1	85	45.141	Gambusia_affinis
ENSRNOG00000045785	LOC100359687	98	55.195	ENSGAGG00000015092	MRPL1	97	53.538	Gopherus_agassizii
ENSRNOG00000045785	LOC100359687	99	74.598	ENSGGOG00000001304	MRPL1	98	76.324	Gorilla_gorilla
ENSRNOG00000045785	LOC100359687	99	47.419	ENSHBUG00000004985	mrpl1	100	47.040	Haplochromis_burtoni
ENSRNOG00000045785	LOC100359687	99	78.065	ENSHGLG00000006127	MRPL1	98	78.505	Heterocephalus_glaber_female
ENSRNOG00000045785	LOC100359687	99	78.065	ENSHGLG00100004303	MRPL1	98	78.505	Heterocephalus_glaber_male
ENSRNOG00000045785	LOC100359687	79	47.154	ENSIPUG00000009866	mrpl1	88	45.946	Ictalurus_punctatus
ENSRNOG00000045785	LOC100359687	99	80.696	ENSSTOG00000001415	MRPL1	98	81.329	Ictidomys_tridecemlineatus
ENSRNOG00000045785	LOC100359687	97	75.817	ENSJJAG00000012571	Mrpl1	96	74.760	Jaculus_jaculus
ENSRNOG00000045785	LOC100359687	97	44.969	ENSKMAG00000004236	mrpl1	75	52.766	Kryptolebias_marmoratus
ENSRNOG00000045785	LOC100359687	75	49.145	ENSLBEG00000013686	-	83	48.945	Labrus_bergylta
ENSRNOG00000045785	LOC100359687	88	44.792	ENSLBEG00000017454	-	92	45.486	Labrus_bergylta
ENSRNOG00000045785	LOC100359687	99	50.323	ENSLACG00000008208	MRPL1	94	49.839	Latimeria_chalumnae
ENSRNOG00000045785	LOC100359687	96	49.062	ENSLOCG00000007408	mrpl1	97	47.840	Lepisosteus_oculatus
ENSRNOG00000045785	LOC100359687	63	81.013	ENSMFAG00000030593	MRPL1	96	80.255	Macaca_fascicularis
ENSRNOG00000045785	LOC100359687	88	77.455	ENSMLEG00000030203	MRPL1	94	76.952	Mandrillus_leucophaeus
ENSRNOG00000045785	LOC100359687	96	49.211	ENSMAMG00000016943	mrpl1	98	48.254	Mastacembelus_armatus
ENSRNOG00000045785	LOC100359687	98	46.729	ENSMZEG00005020288	mrpl1	100	46.729	Maylandia_zebra
ENSRNOG00000045785	LOC100359687	81	50.397	ENSMGAG00000005136	MRPL1	85	55.230	Meleagris_gallopavo
ENSRNOG00000045785	LOC100359687	85	72.761	ENSMAUG00000019228	Mrpl1	90	73.764	Mesocricetus_auratus
ENSRNOG00000045785	LOC100359687	77	82.008	ENSMICG00000032729	-	91	82.553	Microcebus_murinus
ENSRNOG00000045785	LOC100359687	97	88.889	ENSMOCG00000017395	Mrpl1	99	86.997	Microtus_ochrogaster
ENSRNOG00000045785	LOC100359687	86	68.148	ENSMODG00000011704	MRPL1	91	70.000	Monodelphis_domestica
ENSRNOG00000045785	LOC100359687	95	46.006	ENSMALG00000006393	mrpl1	97	46.006	Monopterus_albus
ENSRNOG00000045785	LOC100359687	97	93.485	ENSMUSG00000029486	Mrpl1	96	91.304	Mus_musculus
ENSRNOG00000045785	LOC100359687	97	93.160	MGP_PahariEiJ_G0017208	Mrpl1	96	90.994	Mus_pahari
ENSRNOG00000045785	LOC100359687	97	93.464	MGP_SPRETEiJ_G0028427	Mrpl1	96	91.900	Mus_spretus
ENSRNOG00000045785	LOC100359687	94	79.522	ENSMPUG00000006794	MRPL1	93	79.868	Mustela_putorius_furo
ENSRNOG00000045785	LOC100359687	98	83.007	ENSNGAG00000015669	Mrpl1	96	83.333	Nannospalax_galili
ENSRNOG00000045785	LOC100359687	91	49.470	ENSNBRG00000016660	mrpl1	88	49.648	Neolamprologus_brichardi
ENSRNOG00000045785	LOC100359687	99	74.839	ENSODEG00000004206	MRPL1	97	75.556	Octodon_degus
ENSRNOG00000045785	LOC100359687	98	47.205	ENSONIG00000014024	mrpl1	99	47.205	Oreochromis_niloticus
ENSRNOG00000045785	LOC100359687	84	68.939	ENSOANG00000003564	MRPL1	93	69.847	Ornithorhynchus_anatinus
ENSRNOG00000045785	LOC100359687	99	82.201	ENSOCUG00000003852	MRPL1	100	80.428	Oryctolagus_cuniculus
ENSRNOG00000045785	LOC100359687	88	47.445	ENSORLG00000018859	mrpl1	79	46.947	Oryzias_latipes
ENSRNOG00000045785	LOC100359687	84	47.529	ENSOMEG00000010049	mrpl1	82	47.529	Oryzias_melastigma
ENSRNOG00000045785	LOC100359687	94	77.055	ENSOGAG00000012126	MRPL1	98	76.589	Otolemur_garnettii
ENSRNOG00000045785	LOC100359687	99	74.598	ENSPPAG00000041378	MRPL1	98	76.324	Pan_paniscus
ENSRNOG00000045785	LOC100359687	98	78.361	ENSPPRG00000009221	MRPL1	98	76.947	Panthera_pardus
ENSRNOG00000045785	LOC100359687	98	78.361	ENSPTIG00000015465	MRPL1	98	77.259	Panthera_tigris_altaica
ENSRNOG00000045785	LOC100359687	99	74.920	ENSPTRG00000016199	MRPL1	98	76.636	Pan_troglodytes
ENSRNOG00000045785	LOC100359687	99	76.206	ENSPANG00000007832	MRPL1	100	73.620	Papio_anubis
ENSRNOG00000045785	LOC100359687	98	44.713	ENSPKIG00000019299	mrpl1	77	51.172	Paramormyrops_kingsleyae
ENSRNOG00000045785	LOC100359687	69	63.256	ENSPSIG00000015906	MRPL1	96	63.256	Pelodiscus_sinensis
ENSRNOG00000045785	LOC100359687	80	49.407	ENSPMGG00000004020	mrpl1	87	47.405	Periophthalmus_magnuspinnatus
ENSRNOG00000045785	LOC100359687	100	86.667	ENSPEMG00000018072	-	99	85.759	Peromyscus_maniculatus_bairdii
ENSRNOG00000045785	LOC100359687	91	65.263	ENSPCIG00000029496	-	92	60.968	Phascolarctos_cinereus
ENSRNOG00000045785	LOC100359687	97	45.455	ENSPFOG00000013095	mrpl1	98	45.455	Poecilia_formosa
ENSRNOG00000045785	LOC100359687	97	45.455	ENSPLAG00000019871	mrpl1	99	45.455	Poecilia_latipinna
ENSRNOG00000045785	LOC100359687	97	45.455	ENSPMEG00000015846	mrpl1	99	45.455	Poecilia_mexicana
ENSRNOG00000045785	LOC100359687	98	44.860	ENSPREG00000003524	mrpl1	99	44.860	Poecilia_reticulata
ENSRNOG00000045785	LOC100359687	99	73.955	ENSPPYG00000014870	MRPL1	98	75.701	Pongo_abelii
ENSRNOG00000045785	LOC100359687	98	45.794	ENSPNYG00000006464	mrpl1	98	45.794	Pundamilia_nyererei
ENSRNOG00000045785	LOC100359687	81	50.787	ENSPNAG00000018662	mrpl1	82	49.810	Pygocentrus_nattereri
ENSRNOG00000045785	LOC100359687	99	76.206	ENSRBIG00000040801	MRPL1	98	73.832	Rhinopithecus_bieti
ENSRNOG00000045785	LOC100359687	99	76.527	ENSRROG00000041586	MRPL1	98	74.143	Rhinopithecus_roxellana
ENSRNOG00000045785	LOC100359687	98	64.052	ENSSHAG00000001696	MRPL1	96	62.776	Sarcophilus_harrisii
ENSRNOG00000045785	LOC100359687	96	42.508	ENSSFOG00015014444	mrpl1	98	43.731	Scleropages_formosus
ENSRNOG00000045785	LOC100359687	98	46.254	ENSSMAG00000015530	mrpl1	98	46.562	Scophthalmus_maximus
ENSRNOG00000045785	LOC100359687	98	44.548	ENSSDUG00000018458	mrpl1	99	44.548	Seriola_dumerili
ENSRNOG00000045785	LOC100359687	98	44.548	ENSSLDG00000000399	mrpl1	92	44.548	Seriola_lalandi_dorsalis
ENSRNOG00000045785	LOC100359687	74	57.328	ENSSPUG00000002005	MRPL1	76	57.328	Sphenodon_punctatus
ENSRNOG00000045785	LOC100359687	89	44.710	ENSSPAG00000022922	mrpl1	87	44.027	Stegastes_partitus
ENSRNOG00000045785	LOC100359687	90	49.643	ENSTGUG00000001739	MRPL1	83	49.442	Taeniopygia_guttata
ENSRNOG00000045785	LOC100359687	96	46.984	ENSTRUG00000004229	mrpl1	98	46.984	Takifugu_rubripes
ENSRNOG00000045785	LOC100359687	95	46.645	ENSTNIG00000016716	mrpl1	93	51.538	Tetraodon_nigroviridis
ENSRNOG00000045785	LOC100359687	100	77.564	ENSUMAG00000007973	MRPL1	99	82.463	Ursus_maritimus
ENSRNOG00000045785	LOC100359687	96	45.593	ENSXETG00000000373	mrpl1	95	45.427	Xenopus_tropicalis
ENSRNOG00000045785	LOC100359687	97	44.410	ENSXMAG00000002920	mrpl1	80	49.808	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component