EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000046000 (Gene tree)
Gene ID: 499390
Gene Symbol: Clasrp
Alias: LOC499390|Sfrs16|Srsf16
Full Name: CLK4-associating serine/arginine rich protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 24215 bases
Position: chr1:80491480-80515694
Accession: 1563538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066334	DRY_EERY	PF09750.9	1.7e-42	1	1
ENSRNOP00000075310	DRY_EERY	PF09750.9	1.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075144	-	2136	XM_008758970	ENSRNOP00000066334	668 (aa)	XP_008757192	Q5HZB6
ENSRNOT00000081565	-	2301	XM_008758971	ENSRNOP00000075310	668 (aa)	-	Q5HZB6

Gene Model

Click here to download ENSRNOG00000046000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000046000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000046000	Clasrp	53	98.310	ENSG00000104859	CLASRP	100	100.000	Homo_sapiens
ENSRNOG00000046000	Clasrp	51	82.840	ENSAPOG00000016578	clasrp	59	83.136	Acanthochromis_polyacanthus
ENSRNOG00000046000	Clasrp	96	76.712	ENSAMEG00000012638	CLASRP	50	100.000	Ailuropoda_melanoleuca
ENSRNOG00000046000	Clasrp	53	82.203	ENSACIG00000014149	clasrp	53	82.840	Amphilophus_citrinellus
ENSRNOG00000046000	Clasrp	51	82.840	ENSAOCG00000005893	clasrp	58	83.136	Amphiprion_ocellaris
ENSRNOG00000046000	Clasrp	53	81.921	ENSAPEG00000024441	clasrp	59	83.136	Amphiprion_percula
ENSRNOG00000046000	Clasrp	51	83.728	ENSATEG00000013691	clasrp	59	84.024	Anabas_testudineus
ENSRNOG00000046000	Clasrp	96	76.328	ENSACAG00000004151	CLASRP	52	92.604	Anolis_carolinensis
ENSRNOG00000046000	Clasrp	100	95.556	ENSANAG00000023127	CLASRP	100	95.556	Aotus_nancymaae
ENSRNOG00000046000	Clasrp	53	83.898	ENSACLG00000016357	clasrp	58	84.024	Astatotilapia_calliptera
ENSRNOG00000046000	Clasrp	51	99.408	ENSBTAG00000013697	CLASRP	100	95.994	Bos_taurus
ENSRNOG00000046000	Clasrp	68	99.000	ENSCJAG00000012926	CLASRP	100	95.562	Callithrix_jacchus
ENSRNOG00000046000	Clasrp	57	96.875	ENSCAFG00000004587	CLASRP	81	96.875	Canis_familiaris
ENSRNOG00000046000	Clasrp	53	99.155	ENSTSYG00000012066	CLASRP	100	96.450	Carlito_syrichta
ENSRNOG00000046000	Clasrp	51	98.817	ENSCAPG00000014238	CLASRP	53	98.817	Cavia_aperea
ENSRNOG00000046000	Clasrp	51	98.817	ENSCPOG00000010282	CLASRP	50	98.817	Cavia_porcellus
ENSRNOG00000046000	Clasrp	53	98.864	ENSCCAG00000029385	CLASRP	100	91.608	Cebus_capucinus
ENSRNOG00000046000	Clasrp	53	98.592	ENSCATG00000040827	CLASRP	100	92.147	Cercocebus_atys
ENSRNOG00000046000	Clasrp	51	99.112	ENSCLAG00000002206	CLASRP	50	99.112	Chinchilla_lanigera
ENSRNOG00000046000	Clasrp	57	96.615	ENSCSAG00000003231	CLASRP	81	96.615	Chlorocebus_sabaeus
ENSRNOG00000046000	Clasrp	53	92.113	ENSCPBG00000014391	CLASRP	70	92.899	Chrysemys_picta_bellii
ENSRNOG00000046000	Clasrp	50	38.710	ENSCSAVG00000002630	-	87	40.068	Ciona_savignyi
ENSRNOG00000046000	Clasrp	53	98.592	ENSCANG00000028388	CLASRP	100	91.652	Colobus_angolensis_palliatus
ENSRNOG00000046000	Clasrp	100	98.802	ENSCGRG00001015861	Clasrp	100	98.802	Cricetulus_griseus_chok1gshd
ENSRNOG00000046000	Clasrp	53	80.226	ENSCSEG00000016914	clasrp	59	82.249	Cynoglossus_semilaevis
ENSRNOG00000046000	Clasrp	53	79.379	ENSCVAG00000004010	clasrp	59	81.657	Cyprinodon_variegatus
ENSRNOG00000046000	Clasrp	51	81.471	ENSDARG00000061742	clasrp	52	81.416	Danio_rerio
ENSRNOG00000046000	Clasrp	100	91.317	ENSDORG00000003450	Clasrp	52	100.000	Dipodomys_ordii
ENSRNOG00000046000	Clasrp	98	53.102	ENSEBUG00000013993	clasrp	54	64.820	Eptatretus_burgeri
ENSRNOG00000046000	Clasrp	66	98.438	ENSECAG00000009232	CLASRP	75	99.652	Equus_caballus
ENSRNOG00000046000	Clasrp	52	82.609	ENSELUG00000014585	clasrp	51	83.136	Esox_lucius
ENSRNOG00000046000	Clasrp	53	98.873	ENSFCAG00000033941	CLASRP	100	90.957	Felis_catus
ENSRNOG00000046000	Clasrp	81	99.408	ENSFDAG00000018622	CLASRP	57	99.408	Fukomys_damarensis
ENSRNOG00000046000	Clasrp	53	79.096	ENSFHEG00000006269	clasrp	91	81.065	Fundulus_heteroclitus
ENSRNOG00000046000	Clasrp	63	82.555	ENSGMOG00000007125	clasrp	67	82.555	Gadus_morhua
ENSRNOG00000046000	Clasrp	50	79.641	ENSGACG00000009826	clasrp	50	81.734	Gasterosteus_aculeatus
ENSRNOG00000046000	Clasrp	53	98.310	ENSGGOG00000003384	CLASRP	100	95.401	Gorilla_gorilla
ENSRNOG00000046000	Clasrp	63	74.524	ENSHBUG00000002053	clasrp	50	84.024	Haplochromis_burtoni
ENSRNOG00000046000	Clasrp	56	98.383	ENSHGLG00000019534	CLASRP	51	99.408	Heterocephalus_glaber_female
ENSRNOG00000046000	Clasrp	56	93.801	ENSHGLG00100012344	CLASRP	50	93.787	Heterocephalus_glaber_male
ENSRNOG00000046000	Clasrp	51	81.065	ENSHCOG00000007529	clasrp	59	80.769	Hippocampus_comes
ENSRNOG00000046000	Clasrp	51	80.826	ENSIPUG00000011928	clasrp	52	81.361	Ictalurus_punctatus
ENSRNOG00000046000	Clasrp	51	100.000	ENSSTOG00000009069	CLASRP	96	96.134	Ictidomys_tridecemlineatus
ENSRNOG00000046000	Clasrp	51	81.361	ENSKMAG00000020973	clasrp	58	81.657	Kryptolebias_marmoratus
ENSRNOG00000046000	Clasrp	53	81.638	ENSLBEG00000021054	clasrp	52	83.136	Labrus_bergylta
ENSRNOG00000046000	Clasrp	51	84.795	ENSLACG00000000893	CLASRP	53	87.278	Latimeria_chalumnae
ENSRNOG00000046000	Clasrp	54	83.799	ENSLOCG00000014647	clasrp	51	86.391	Lepisosteus_oculatus
ENSRNOG00000046000	Clasrp	100	97.015	ENSLAFG00000008075	CLASRP	100	97.015	Loxodonta_africana
ENSRNOG00000046000	Clasrp	53	98.310	ENSMFAG00000032121	CLASRP	100	91.972	Macaca_fascicularis
ENSRNOG00000046000	Clasrp	53	98.592	ENSMMUG00000014155	CLASRP	100	92.147	Macaca_mulatta
ENSRNOG00000046000	Clasrp	53	98.310	ENSMNEG00000000043	CLASRP	100	92.147	Macaca_nemestrina
ENSRNOG00000046000	Clasrp	53	98.592	ENSMLEG00000034161	CLASRP	51	99.112	Mandrillus_leucophaeus
ENSRNOG00000046000	Clasrp	53	81.356	ENSMAMG00000011689	clasrp	51	83.432	Mastacembelus_armatus
ENSRNOG00000046000	Clasrp	75	83.898	ENSMZEG00005016696	clasrp	50	84.024	Maylandia_zebra
ENSRNOG00000046000	Clasrp	100	98.204	ENSMAUG00000000378	Clasrp	100	98.204	Mesocricetus_auratus
ENSRNOG00000046000	Clasrp	68	95.852	ENSMICG00000006996	CLASRP	100	96.291	Microcebus_murinus
ENSRNOG00000046000	Clasrp	100	98.054	ENSMOCG00000007548	Clasrp	100	98.054	Microtus_ochrogaster
ENSRNOG00000046000	Clasrp	68	70.533	ENSMMOG00000012523	clasrp	72	85.000	Mola_mola
ENSRNOG00000046000	Clasrp	100	86.303	ENSMODG00000020854	CLASRP	52	94.752	Monodelphis_domestica
ENSRNOG00000046000	Clasrp	53	81.073	ENSMALG00000012365	clasrp	71	83.136	Monopterus_albus
ENSRNOG00000046000	Clasrp	100	99.102	MGP_CAROLIEiJ_G0029299	Clasrp	100	99.102	Mus_caroli
ENSRNOG00000046000	Clasrp	100	99.251	ENSMUSG00000061028	Clasrp	100	99.251	Mus_musculus
ENSRNOG00000046000	Clasrp	100	99.551	MGP_PahariEiJ_G0021159	Clasrp	100	99.551	Mus_pahari
ENSRNOG00000046000	Clasrp	100	99.251	MGP_SPRETEiJ_G0030383	Clasrp	100	99.251	Mus_spretus
ENSRNOG00000046000	Clasrp	56	96.286	ENSMLUG00000002165	CLASRP	50	96.491	Myotis_lucifugus
ENSRNOG00000046000	Clasrp	100	93.294	ENSNGAG00000016249	Clasrp	100	93.294	Nannospalax_galili
ENSRNOG00000046000	Clasrp	53	83.898	ENSNBRG00000004382	clasrp	68	84.024	Neolamprologus_brichardi
ENSRNOG00000046000	Clasrp	53	79.255	ENSNLEG00000001811	CLASRP	56	78.552	Nomascus_leucogenys
ENSRNOG00000046000	Clasrp	56	84.881	ENSMEUG00000009998	CLASRP	52	86.982	Notamacropus_eugenii
ENSRNOG00000046000	Clasrp	51	98.817	ENSOPRG00000008066	CLASRP	50	98.817	Ochotona_princeps
ENSRNOG00000046000	Clasrp	51	98.817	ENSODEG00000008407	CLASRP	50	98.817	Octodon_degus
ENSRNOG00000046000	Clasrp	53	83.616	ENSONIG00000003756	clasrp	51	83.728	Oreochromis_niloticus
ENSRNOG00000046000	Clasrp	53	81.921	ENSORLG00000006568	clasrp	53	81.953	Oryzias_latipes
ENSRNOG00000046000	Clasrp	53	81.921	ENSORLG00020003213	clasrp	54	81.525	Oryzias_latipes_hni
ENSRNOG00000046000	Clasrp	53	81.638	ENSORLG00015005655	clasrp	54	81.232	Oryzias_latipes_hsok
ENSRNOG00000046000	Clasrp	53	81.638	ENSOMEG00000013102	clasrp	51	81.953	Oryzias_melastigma
ENSRNOG00000046000	Clasrp	68	94.748	ENSOGAG00000034160	CLASRP	50	99.112	Otolemur_garnettii
ENSRNOG00000046000	Clasrp	51	99.408	ENSOARG00000009616	CLASRP	51	99.408	Ovis_aries
ENSRNOG00000046000	Clasrp	53	98.310	ENSPPAG00000040215	CLASRP	100	91.958	Pan_paniscus
ENSRNOG00000046000	Clasrp	53	98.873	ENSPPRG00000017479	CLASRP	100	92.483	Panthera_pardus
ENSRNOG00000046000	Clasrp	53	98.310	ENSPTRG00000022583	CLASRP	100	95.266	Pan_troglodytes
ENSRNOG00000046000	Clasrp	53	98.592	ENSPANG00000012804	CLASRP	100	92.147	Papio_anubis
ENSRNOG00000046000	Clasrp	51	84.366	ENSPKIG00000011266	clasrp	71	82.840	Paramormyrops_kingsleyae
ENSRNOG00000046000	Clasrp	53	89.356	ENSPSIG00000013177	CLASRP	52	90.533	Pelodiscus_sinensis
ENSRNOG00000046000	Clasrp	66	77.522	ENSPMGG00000014094	clasrp	77	79.121	Periophthalmus_magnuspinnatus
ENSRNOG00000046000	Clasrp	100	98.503	ENSPEMG00000017845	Clasrp	100	98.503	Peromyscus_maniculatus_bairdii
ENSRNOG00000046000	Clasrp	56	93.651	ENSPCIG00000022909	CLASRP	57	96.154	Phascolarctos_cinereus
ENSRNOG00000046000	Clasrp	57	74.869	ENSPFOG00000010596	clasrp	51	80.826	Poecilia_formosa
ENSRNOG00000046000	Clasrp	53	78.531	ENSPLAG00000019619	clasrp	86	81.065	Poecilia_latipinna
ENSRNOG00000046000	Clasrp	51	79.882	ENSPMEG00000016136	clasrp	50	81.065	Poecilia_mexicana
ENSRNOG00000046000	Clasrp	53	75.623	ENSPREG00000001075	clasrp	56	77.681	Poecilia_reticulata
ENSRNOG00000046000	Clasrp	53	98.310	ENSPPYG00000010104	CLASRP	50	99.112	Pongo_abelii
ENSRNOG00000046000	Clasrp	100	83.580	ENSPCAG00000010871	CLASRP	50	87.500	Procavia_capensis
ENSRNOG00000046000	Clasrp	69	95.503	ENSPCOG00000018016	CLASRP	100	96.018	Propithecus_coquereli
ENSRNOG00000046000	Clasrp	68	96.288	ENSPVAG00000015954	CLASRP	100	96.302	Pteropus_vampyrus
ENSRNOG00000046000	Clasrp	53	83.898	ENSPNYG00000006221	clasrp	60	84.024	Pundamilia_nyererei
ENSRNOG00000046000	Clasrp	53	77.095	ENSPNAG00000019075	clasrp	52	74.260	Pygocentrus_nattereri
ENSRNOG00000046000	Clasrp	100	88.905	ENSRROG00000045419	CLASRP	100	88.905	Rhinopithecus_roxellana
ENSRNOG00000046000	Clasrp	53	92.458	ENSSHAG00000004444	-	69	95.322	Sarcophilus_harrisii
ENSRNOG00000046000	Clasrp	51	84.661	ENSSFOG00015006361	clasrp	52	84.615	Scleropages_formosus
ENSRNOG00000046000	Clasrp	53	80.791	ENSSMAG00000013333	clasrp	53	82.249	Scophthalmus_maximus
ENSRNOG00000046000	Clasrp	53	82.436	ENSSLDG00000020726	clasrp	58	83.728	Seriola_lalandi_dorsalis
ENSRNOG00000046000	Clasrp	84	74.120	ENSSPUG00000010734	CLASRP	61	91.420	Sphenodon_punctatus
ENSRNOG00000046000	Clasrp	53	82.203	ENSSPAG00000008665	clasrp	51	83.432	Stegastes_partitus
ENSRNOG00000046000	Clasrp	51	80.769	ENSTRUG00000009842	clasrp	85	81.361	Takifugu_rubripes
ENSRNOG00000046000	Clasrp	51	79.825	ENSTNIG00000007734	clasrp	51	81.361	Tetraodon_nigroviridis
ENSRNOG00000046000	Clasrp	57	100.000	ENSTBEG00000001906	CLASRP	73	100.000	Tupaia_belangeri
ENSRNOG00000046000	Clasrp	60	96.584	ENSUMAG00000023392	CLASRP	91	94.785	Ursus_maritimus
ENSRNOG00000046000	Clasrp	63	98.438	ENSVVUG00000008161	CLASRP	84	91.463	Vulpes_vulpes
ENSRNOG00000046000	Clasrp	96	67.228	ENSXETG00000019073	clasrp	50	85.503	Xenopus_tropicalis
ENSRNOG00000046000	Clasrp	51	79.586	ENSXMAG00000018599	clasrp	51	80.769	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process