EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000046172 (Gene tree)
Gene ID: -
Gene Symbol: Sf3b6
Alias: LOC100365504
Full Name: splicing factor 3B%2C subunit 6
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 8104 bases
Position: chr6:29991307-29999410
Accession: 2318878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065625	RRM_1	PF00076.22	6.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075790	-	372	-	ENSRNOP00000065625	123 (aa)	-	M0R835

Gene Model

Click here to download ENSRNOG00000046172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000046172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000046172	Sf3b6	100	84.800	ENSG00000115128	SF3B6	100	84.800	Homo_sapiens
ENSRNOG00000046172	Sf3b6	100	83.200	ENSAPOG00000023788	sf3b6	100	83.200	Acanthochromis_polyacanthus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSAMEG00000002786	SF3B6	100	84.800	Ailuropoda_melanoleuca
ENSRNOG00000046172	Sf3b6	100	83.200	ENSACIG00000012608	sf3b6	100	83.200	Amphilophus_citrinellus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSAOCG00000013394	sf3b6	100	83.200	Amphiprion_ocellaris
ENSRNOG00000046172	Sf3b6	100	83.200	ENSAPEG00000015311	sf3b6	100	83.200	Amphiprion_percula
ENSRNOG00000046172	Sf3b6	100	83.200	ENSATEG00000016569	sf3b6	100	83.200	Anabas_testudineus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSACAG00000011677	SF3B6	100	84.800	Anolis_carolinensis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSANAG00000027284	SF3B6	95	84.800	Aotus_nancymaae
ENSRNOG00000046172	Sf3b6	100	83.200	ENSACLG00000007793	sf3b6	100	83.200	Astatotilapia_calliptera
ENSRNOG00000046172	Sf3b6	100	84.800	ENSAMXG00000034888	sf3b6	100	84.800	Astyanax_mexicanus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSBTAG00000049128	-	100	83.200	Bos_taurus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSBTAG00000003407	SF3B6	100	84.800	Bos_taurus
ENSRNOG00000046172	Sf3b6	100	58.400	WBGene00016808	C50D2.5	91	58.400	Caenorhabditis_elegans
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCJAG00000007716	SF3B6	100	84.800	Callithrix_jacchus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCAFG00000003957	SF3B6	100	84.800	Canis_familiaris
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCAFG00020025576	SF3B6	100	84.800	Canis_lupus_dingo
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCHIG00000009902	SF3B6	100	84.800	Capra_hircus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSTSYG00000013978	SF3B6	100	84.800	Carlito_syrichta
ENSRNOG00000046172	Sf3b6	97	80.992	ENSCAPG00000016302	SF3B6	99	80.992	Cavia_aperea
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCPOG00000008016	SF3B6	100	84.800	Cavia_porcellus
ENSRNOG00000046172	Sf3b6	99	79.839	ENSCCAG00000018894	-	96	79.839	Cebus_capucinus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCCAG00000036653	SF3B6	100	84.800	Cebus_capucinus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCATG00000030936	SF3B6	100	84.800	Cercocebus_atys
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCLAG00000014512	SF3B6	100	84.800	Chinchilla_lanigera
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCSAG00000008390	SF3B6	100	84.800	Chlorocebus_sabaeus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCHOG00000000689	SF3B6	100	84.800	Choloepus_hoffmanni
ENSRNOG00000046172	Sf3b6	99	60.484	ENSCHOG00000013886	-	99	60.484	Choloepus_hoffmanni
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCPBG00000020042	SF3B6	100	84.800	Chrysemys_picta_bellii
ENSRNOG00000046172	Sf3b6	98	66.667	ENSCING00000012689	-	97	66.667	Ciona_intestinalis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCANG00000030559	SF3B6	100	84.800	Colobus_angolensis_palliatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCGRG00001014595	Sf3b6	100	84.800	Cricetulus_griseus_chok1gshd
ENSRNOG00000046172	Sf3b6	100	84.800	ENSCGRG00000005272	Sf3b6	100	84.800	Cricetulus_griseus_crigri
ENSRNOG00000046172	Sf3b6	100	82.400	ENSCSEG00000019017	sf3b6	100	82.400	Cynoglossus_semilaevis
ENSRNOG00000046172	Sf3b6	100	84.000	ENSCVAG00000005055	sf3b6	100	84.000	Cyprinodon_variegatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSDARG00000009753	sf3b6	100	84.800	Danio_rerio
ENSRNOG00000046172	Sf3b6	100	84.800	ENSDNOG00000007148	SF3B6	100	84.800	Dasypus_novemcinctus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSDORG00000009772	Sf3b6	100	84.800	Dipodomys_ordii
ENSRNOG00000046172	Sf3b6	99	73.016	ENSDORG00000027390	-	98	73.016	Dipodomys_ordii
ENSRNOG00000046172	Sf3b6	99	73.016	ENSDORG00000029761	-	98	73.016	Dipodomys_ordii
ENSRNOG00000046172	Sf3b6	92	63.478	FBgn0035692	Sf3b6	95	63.478	Drosophila_melanogaster
ENSRNOG00000046172	Sf3b6	92	76.522	ENSEBUG00000004424	sf3b6	91	76.522	Eptatretus_burgeri
ENSRNOG00000046172	Sf3b6	100	84.800	ENSEASG00005009993	SF3B6	100	84.800	Equus_asinus_asinus
ENSRNOG00000046172	Sf3b6	100	77.600	ENSEASG00005008061	-	100	77.600	Equus_asinus_asinus
ENSRNOG00000046172	Sf3b6	73	77.174	ENSECAG00000027755	-	79	77.174	Equus_caballus
ENSRNOG00000046172	Sf3b6	73	83.696	ENSECAG00000015618	SF3B6	84	83.696	Equus_caballus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSELUG00000010379	sf3b6	100	83.200	Esox_lucius
ENSRNOG00000046172	Sf3b6	100	84.800	ENSFCAG00000031365	SF3B6	100	84.800	Felis_catus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSFALG00000001651	SF3B6	100	84.800	Ficedula_albicollis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSFDAG00000007864	SF3B6	100	84.800	Fukomys_damarensis
ENSRNOG00000046172	Sf3b6	100	84.000	ENSFHEG00000000685	sf3b6	100	84.000	Fundulus_heteroclitus
ENSRNOG00000046172	Sf3b6	100	82.400	ENSGMOG00000005123	sf3b6	100	82.400	Gadus_morhua
ENSRNOG00000046172	Sf3b6	72	79.121	ENSGALG00000016501	SF3B6	100	79.121	Gallus_gallus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSGAFG00000009334	sf3b6	100	83.200	Gambusia_affinis
ENSRNOG00000046172	Sf3b6	100	82.400	ENSGACG00000004803	sf3b6	100	82.400	Gasterosteus_aculeatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSGAGG00000012240	SF3B6	100	84.800	Gopherus_agassizii
ENSRNOG00000046172	Sf3b6	100	84.800	ENSGGOG00000040806	SF3B6	100	84.800	Gorilla_gorilla
ENSRNOG00000046172	Sf3b6	100	83.200	ENSHBUG00000012556	sf3b6	100	83.200	Haplochromis_burtoni
ENSRNOG00000046172	Sf3b6	100	84.800	ENSHGLG00000014895	SF3B14	100	84.800	Heterocephalus_glaber_female
ENSRNOG00000046172	Sf3b6	100	84.800	ENSHGLG00100008639	SF3B14	100	84.800	Heterocephalus_glaber_male
ENSRNOG00000046172	Sf3b6	100	84.000	ENSHCOG00000019962	sf3b6	100	84.000	Hippocampus_comes
ENSRNOG00000046172	Sf3b6	100	84.800	ENSIPUG00000023800	sf3b6	100	84.800	Ictalurus_punctatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSJJAG00000021819	Sf3b6	100	84.800	Jaculus_jaculus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSKMAG00000004000	sf3b6	100	83.200	Kryptolebias_marmoratus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSLBEG00000022937	sf3b6	100	83.200	Labrus_bergylta
ENSRNOG00000046172	Sf3b6	100	84.800	ENSLACG00000014326	SF3B6	100	84.800	Latimeria_chalumnae
ENSRNOG00000046172	Sf3b6	100	84.800	ENSLOCG00000016481	sf3b6	100	84.800	Lepisosteus_oculatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSLAFG00000029423	SF3B6	100	84.800	Loxodonta_africana
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMFAG00000038178	SF3B6	100	84.800	Macaca_fascicularis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMMUG00000001282	SF3B6	100	84.800	Macaca_mulatta
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMNEG00000029050	SF3B6	100	84.800	Macaca_nemestrina
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMLEG00000019896	SF3B6	100	84.800	Mandrillus_leucophaeus
ENSRNOG00000046172	Sf3b6	73	81.522	ENSMAMG00000007713	sf3b6	84	81.522	Mastacembelus_armatus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSMZEG00005003557	sf3b6	100	83.200	Maylandia_zebra
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMGAG00000014057	SF3B6	100	84.800	Meleagris_gallopavo
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMAUG00000000586	-	100	84.800	Mesocricetus_auratus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMICG00000032874	SF3B6	100	84.800	Microcebus_murinus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMOCG00000014338	Sf3b6	100	84.800	Microtus_ochrogaster
ENSRNOG00000046172	Sf3b6	100	84.000	ENSMMOG00000015653	sf3b6	100	84.000	Mola_mola
ENSRNOG00000046172	Sf3b6	100	82.400	ENSMODG00000002144	SF3B6	100	82.400	Monodelphis_domestica
ENSRNOG00000046172	Sf3b6	100	84.000	ENSMALG00000019642	sf3b6	67	84.000	Monopterus_albus
ENSRNOG00000046172	Sf3b6	100	84.800	MGP_CAROLIEiJ_G0017590	Sf3b6	100	84.800	Mus_caroli
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMUSG00000037361	Sf3b6	100	84.800	Mus_musculus
ENSRNOG00000046172	Sf3b6	100	84.800	MGP_PahariEiJ_G0029348	Sf3b6	100	84.800	Mus_pahari
ENSRNOG00000046172	Sf3b6	100	84.800	MGP_SPRETEiJ_G0018434	Sf3b6	100	84.800	Mus_spretus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSMPUG00000013957	SF3B6	100	84.800	Mustela_putorius_furo
ENSRNOG00000046172	Sf3b6	100	83.200	ENSMLUG00000002473	SF3B6	100	83.200	Myotis_lucifugus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSNGAG00000020256	Sf3b6	100	84.800	Nannospalax_galili
ENSRNOG00000046172	Sf3b6	100	83.200	ENSNBRG00000018244	sf3b6	100	83.200	Neolamprologus_brichardi
ENSRNOG00000046172	Sf3b6	100	84.800	ENSNLEG00000000815	-	100	84.800	Nomascus_leucogenys
ENSRNOG00000046172	Sf3b6	87	82.569	ENSODEG00000009547	SF3B6	92	82.569	Octodon_degus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSONIG00000001219	sf3b6	100	83.200	Oreochromis_niloticus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSOANG00000007627	SF3B6	100	84.800	Ornithorhynchus_anatinus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSOCUG00000022008	SF3B6	100	84.800	Oryctolagus_cuniculus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSORLG00000015955	sf3b6	100	83.200	Oryzias_latipes
ENSRNOG00000046172	Sf3b6	100	83.200	ENSORLG00020005875	sf3b6	100	83.200	Oryzias_latipes_hni
ENSRNOG00000046172	Sf3b6	100	83.200	ENSORLG00015001347	sf3b6	100	83.200	Oryzias_latipes_hsok
ENSRNOG00000046172	Sf3b6	100	83.200	ENSOMEG00000014506	sf3b6	100	83.200	Oryzias_melastigma
ENSRNOG00000046172	Sf3b6	100	84.800	ENSOGAG00000004468	SF3B6	100	84.800	Otolemur_garnettii
ENSRNOG00000046172	Sf3b6	100	84.800	ENSOARG00000017819	SF3B6	100	84.800	Ovis_aries
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPPAG00000027816	SF3B6	100	84.800	Pan_paniscus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPPRG00000023257	SF3B6	100	84.800	Panthera_pardus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPTIG00000013322	SF3B6	100	84.800	Panthera_tigris_altaica
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPTRG00000011709	SF3B6	100	84.800	Pan_troglodytes
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPANG00000021963	SF3B6	100	84.800	Papio_anubis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPKIG00000012311	sf3b6	100	84.800	Paramormyrops_kingsleyae
ENSRNOG00000046172	Sf3b6	92	83.478	ENSPSIG00000017115	SF3B6	100	83.478	Pelodiscus_sinensis
ENSRNOG00000046172	Sf3b6	73	81.522	ENSPMGG00000014621	sf3b6	77	81.522	Periophthalmus_magnuspinnatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPEMG00000010308	Sf3b6	100	84.800	Peromyscus_maniculatus_bairdii
ENSRNOG00000046172	Sf3b6	94	72.881	ENSPMAG00000006008	sf3b6	94	72.881	Petromyzon_marinus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPCIG00000022128	-	100	84.800	Phascolarctos_cinereus
ENSRNOG00000046172	Sf3b6	99	68.548	ENSPCIG00000015858	-	99	68.548	Phascolarctos_cinereus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSPFOG00000012494	sf3b6	100	83.200	Poecilia_formosa
ENSRNOG00000046172	Sf3b6	100	83.200	ENSPLAG00000020460	sf3b6	100	83.200	Poecilia_latipinna
ENSRNOG00000046172	Sf3b6	100	83.200	ENSPMEG00000004426	sf3b6	100	83.200	Poecilia_mexicana
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPPYG00000012603	SF3B6	100	84.800	Pongo_abelii
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPVAG00000011346	SF3B6	100	84.800	Pteropus_vampyrus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSPNYG00000021832	sf3b6	100	83.200	Pundamilia_nyererei
ENSRNOG00000046172	Sf3b6	100	84.800	ENSPNAG00000008845	sf3b6	100	84.800	Pygocentrus_nattereri
ENSRNOG00000046172	Sf3b6	100	84.800	ENSRBIG00000039598	SF3B6	100	84.800	Rhinopithecus_bieti
ENSRNOG00000046172	Sf3b6	100	84.800	ENSRROG00000011368	SF3B6	100	84.800	Rhinopithecus_roxellana
ENSRNOG00000046172	Sf3b6	100	84.800	ENSSBOG00000002914	SF3B6	100	84.800	Saimiri_boliviensis_boliviensis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSSFOG00015014370	sf3b6	100	84.800	Scleropages_formosus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSSMAG00000004566	sf3b6	100	83.200	Scophthalmus_maximus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSSDUG00000006538	sf3b6	100	83.200	Seriola_dumerili
ENSRNOG00000046172	Sf3b6	100	83.200	ENSSLDG00000004494	sf3b6	100	83.200	Seriola_lalandi_dorsalis
ENSRNOG00000046172	Sf3b6	100	84.800	ENSSARG00000011902	-	100	84.800	Sorex_araneus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSSPUG00000014919	SF3B6	100	84.800	Sphenodon_punctatus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSSPAG00000013201	sf3b6	100	83.200	Stegastes_partitus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSSSCG00000008587	SF3B6	100	84.800	Sus_scrofa
ENSRNOG00000046172	Sf3b6	100	84.800	ENSTGUG00000013191	SF3B6	100	84.800	Taeniopygia_guttata
ENSRNOG00000046172	Sf3b6	100	83.200	ENSTRUG00000025286	sf3b6	100	83.200	Takifugu_rubripes
ENSRNOG00000046172	Sf3b6	100	83.200	ENSTNIG00000009719	sf3b6	100	83.200	Tetraodon_nigroviridis
ENSRNOG00000046172	Sf3b6	92	83.478	ENSTBEG00000012532	SF3B6	100	83.478	Tupaia_belangeri
ENSRNOG00000046172	Sf3b6	92	83.478	ENSTTRG00000013430	SF3B6	100	83.478	Tursiops_truncatus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSUAMG00000025329	SF3B6	100	84.800	Ursus_americanus
ENSRNOG00000046172	Sf3b6	100	75.397	ENSUAMG00000000978	-	100	75.397	Ursus_americanus
ENSRNOG00000046172	Sf3b6	100	84.800	ENSUMAG00000022835	SF3B6	100	84.800	Ursus_maritimus
ENSRNOG00000046172	Sf3b6	92	83.478	ENSVPAG00000005546	SF3B6	100	83.478	Vicugna_pacos
ENSRNOG00000046172	Sf3b6	100	84.800	ENSVVUG00000010874	SF3B6	100	84.800	Vulpes_vulpes
ENSRNOG00000046172	Sf3b6	100	84.000	ENSXETG00000018204	sf3b6	100	84.000	Xenopus_tropicalis
ENSRNOG00000046172	Sf3b6	85	70.796	ENSXCOG00000008477	sf3b6	88	70.796	Xiphophorus_couchianus
ENSRNOG00000046172	Sf3b6	100	83.200	ENSXMAG00000010747	sf3b6	100	83.200	Xiphophorus_maculatus