EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000046621 (Gene tree)
Gene ID: -
Gene Symbol: AABR07043748.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4108 bases
Position: chr19:38340738-38344845
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065578	IF-2	PF11987.8	2e-19	1	1
ENSRNOP00000065578	GTP_EFTU	PF00009.27	3.6e-34	1	1
ENSRNOP00000065578	MMR_HSR1	PF01926.23	5e-07	1	1
ENSRNOP00000065578	GTP_EFTU_D2	PF03144.25	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072666	AABR07043748.1-201	4108	-	ENSRNOP00000065578	1215 (aa)	-	M0R7Z0

Gene Model

Click here to download ENSRNOG00000046621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000046621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000046621	AABR07043748.1	99	99.751	ENSRNOG00000023356	Eif5b	100	99.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000046621	AABR07043748.1	100	88.216	ENSG00000158417	EIF5B	100	88.380	Homo_sapiens
ENSRNOG00000046621	AABR07043748.1	100	88.543	ENSAMEG00000013269	EIF5B	100	88.789	Ailuropoda_melanoleuca
ENSRNOG00000046621	AABR07043748.1	99	78.776	ENSAPLG00000015401	EIF5B	100	80.180	Anas_platyrhynchos
ENSRNOG00000046621	AABR07043748.1	100	89.025	ENSANAG00000017300	EIF5B	100	89.271	Aotus_nancymaae
ENSRNOG00000046621	AABR07043748.1	100	86.896	ENSBTAG00000034255	EIF5B	99	87.779	Bos_taurus
ENSRNOG00000046621	AABR07043748.1	100	88.698	ENSCAFG00000002278	EIF5B	100	88.943	Canis_familiaris
ENSRNOG00000046621	AABR07043748.1	98	88.107	ENSCAFG00020024623	EIF5B	99	88.394	Canis_lupus_dingo
ENSRNOG00000046621	AABR07043748.1	100	87.715	ENSCHIG00000027106	EIF5B	100	88.206	Capra_hircus
ENSRNOG00000046621	AABR07043748.1	99	88.668	ENSTSYG00000011850	EIF5B	100	88.916	Carlito_syrichta
ENSRNOG00000046621	AABR07043748.1	99	88.221	ENSCCAG00000027156	EIF5B	99	88.468	Cebus_capucinus
ENSRNOG00000046621	AABR07043748.1	100	88.635	ENSCATG00000038292	EIF5B	100	88.635	Cercocebus_atys
ENSRNOG00000046621	AABR07043748.1	100	87.715	ENSCLAG00000007674	EIF5B	100	87.551	Chinchilla_lanigera
ENSRNOG00000046621	AABR07043748.1	100	88.480	ENSCSAG00000017209	EIF5B	100	88.644	Chlorocebus_sabaeus
ENSRNOG00000046621	AABR07043748.1	100	81.235	ENSCPBG00000005318	EIF5B	100	80.732	Chrysemys_picta_bellii
ENSRNOG00000046621	AABR07043748.1	100	88.226	ENSCANG00000042984	EIF5B	100	87.817	Colobus_angolensis_palliatus
ENSRNOG00000046621	AABR07043748.1	100	90.730	ENSCGRG00001010937	Eif5b	100	90.976	Cricetulus_griseus_chok1gshd
ENSRNOG00000046621	AABR07043748.1	99	90.713	ENSCGRG00000003140	Eif5b	100	90.962	Cricetulus_griseus_crigri
ENSRNOG00000046621	AABR07043748.1	94	87.784	ENSDNOG00000005016	EIF5B	99	88.045	Dasypus_novemcinctus
ENSRNOG00000046621	AABR07043748.1	100	84.331	ENSETEG00000001467	EIF5B	100	84.085	Echinops_telfairi
ENSRNOG00000046621	AABR07043748.1	100	88.616	ENSEASG00005018269	EIF5B	100	89.353	Equus_asinus_asinus
ENSRNOG00000046621	AABR07043748.1	100	89.353	ENSECAG00000000102	EIF5B	100	89.599	Equus_caballus
ENSRNOG00000046621	AABR07043748.1	99	87.747	ENSFCAG00000009782	EIF5B	100	87.993	Felis_catus
ENSRNOG00000046621	AABR07043748.1	100	88.361	ENSFDAG00000008737	EIF5B	100	88.607	Fukomys_damarensis
ENSRNOG00000046621	AABR07043748.1	100	80.244	ENSGALG00000016764	EIF5B	100	80.407	Gallus_gallus
ENSRNOG00000046621	AABR07043748.1	100	88.134	ENSGGOG00000001721	EIF5B	100	88.298	Gorilla_gorilla
ENSRNOG00000046621	AABR07043748.1	100	88.834	ENSHGLG00000016367	EIF5B	100	88.998	Heterocephalus_glaber_female
ENSRNOG00000046621	AABR07043748.1	100	88.752	ENSHGLG00100016185	EIF5B	100	88.916	Heterocephalus_glaber_male
ENSRNOG00000046621	AABR07043748.1	100	88.780	ENSSTOG00000014283	EIF5B	100	88.943	Ictidomys_tridecemlineatus
ENSRNOG00000046621	AABR07043748.1	73	75.854	ENSLOCG00000001405	EIF5B	51	86.495	Lepisosteus_oculatus
ENSRNOG00000046621	AABR07043748.1	100	87.961	ENSLAFG00000006209	EIF5B	100	87.469	Loxodonta_africana
ENSRNOG00000046621	AABR07043748.1	100	88.716	ENSMFAG00000038108	EIF5B	100	88.716	Macaca_fascicularis
ENSRNOG00000046621	AABR07043748.1	100	88.635	ENSMMUG00000018946	EIF5B	100	88.635	Macaca_mulatta
ENSRNOG00000046621	AABR07043748.1	100	88.716	ENSMNEG00000040038	EIF5B	100	88.716	Macaca_nemestrina
ENSRNOG00000046621	AABR07043748.1	99	88.531	ENSMLEG00000031596	EIF5B	100	88.531	Mandrillus_leucophaeus
ENSRNOG00000046621	AABR07043748.1	99	80.130	ENSMGAG00000014793	EIF5B	100	80.211	Meleagris_gallopavo
ENSRNOG00000046621	AABR07043748.1	99	89.339	ENSMICG00000015960	EIF5B	99	89.661	Microcebus_murinus
ENSRNOG00000046621	AABR07043748.1	100	96.464	MGP_CAROLIEiJ_G0014061	Eif5b	100	96.464	Mus_caroli
ENSRNOG00000046621	AABR07043748.1	100	96.793	ENSMUSG00000026083	Eif5b	100	96.793	Mus_musculus
ENSRNOG00000046621	AABR07043748.1	100	96.382	MGP_PahariEiJ_G0027308	Eif5b	100	96.382	Mus_pahari
ENSRNOG00000046621	AABR07043748.1	100	96.711	MGP_SPRETEiJ_G0014865	Eif5b	100	96.711	Mus_spretus
ENSRNOG00000046621	AABR07043748.1	100	88.780	ENSMPUG00000012068	EIF5B	100	89.107	Mustela_putorius_furo
ENSRNOG00000046621	AABR07043748.1	99	88.026	ENSMLUG00000008119	EIF5B	100	87.769	Myotis_lucifugus
ENSRNOG00000046621	AABR07043748.1	100	88.134	ENSNLEG00000014172	EIF5B	100	88.298	Nomascus_leucogenys
ENSRNOG00000046621	AABR07043748.1	93	85.601	ENSOPRG00000007359	EIF5B	93	85.601	Ochotona_princeps
ENSRNOG00000046621	AABR07043748.1	99	88.843	ENSOGAG00000013238	EIF5B	99	89.513	Otolemur_garnettii
ENSRNOG00000046621	AABR07043748.1	100	88.043	ENSOARG00000013400	EIF5B	100	88.534	Ovis_aries
ENSRNOG00000046621	AABR07043748.1	99	86.139	ENSPPAG00000029857	EIF5B	100	86.056	Pan_paniscus
ENSRNOG00000046621	AABR07043748.1	99	88.512	ENSPPRG00000010820	EIF5B	99	88.760	Panthera_pardus
ENSRNOG00000046621	AABR07043748.1	99	86.360	ENSPTIG00000021215	EIF5B	99	86.606	Panthera_tigris_altaica
ENSRNOG00000046621	AABR07043748.1	100	88.298	ENSPTRG00000012279	EIF5B	100	88.462	Pan_troglodytes
ENSRNOG00000046621	AABR07043748.1	100	88.962	ENSPANG00000021269	EIF5B	100	89.043	Papio_anubis
ENSRNOG00000046621	AABR07043748.1	99	82.605	ENSPCIG00000011603	EIF5B	99	82.673	Phascolarctos_cinereus
ENSRNOG00000046621	AABR07043748.1	83	85.225	ENSPPYG00000012094	EIF5B	100	85.421	Pongo_abelii
ENSRNOG00000046621	AABR07043748.1	99	86.341	ENSRBIG00000028180	EIF5B	99	85.549	Rhinopithecus_bieti
ENSRNOG00000046621	AABR07043748.1	100	88.307	ENSRROG00000038801	EIF5B	100	88.307	Rhinopithecus_roxellana
ENSRNOG00000046621	AABR07043748.1	100	88.298	ENSSBOG00000033578	EIF5B	100	88.543	Saimiri_boliviensis_boliviensis
ENSRNOG00000046621	AABR07043748.1	100	84.898	ENSSHAG00000010146	EIF5B	100	84.735	Sarcophilus_harrisii
ENSRNOG00000046621	AABR07043748.1	99	87.954	ENSSARG00000002096	EIF5B	100	87.789	Sorex_araneus
ENSRNOG00000046621	AABR07043748.1	99	78.583	ENSSPUG00000009445	EIF5B	99	78.254	Sphenodon_punctatus
ENSRNOG00000046621	AABR07043748.1	100	88.206	ENSSSCG00000008180	EIF5B	100	88.288	Sus_scrofa
ENSRNOG00000046621	AABR07043748.1	100	78.571	ENSTGUG00000010099	EIF5B	100	78.977	Taeniopygia_guttata
ENSRNOG00000046621	AABR07043748.1	100	85.761	ENSTTRG00000010374	EIF5B	100	86.007	Tursiops_truncatus
ENSRNOG00000046621	AABR07043748.1	99	88.595	ENSUMAG00000008519	EIF5B	98	97.243	Ursus_maritimus
ENSRNOG00000046621	AABR07043748.1	88	86.220	ENSVPAG00000007725	EIF5B	100	86.778	Vicugna_pacos
ENSRNOG00000046621	AABR07043748.1	100	88.698	ENSVVUG00000028702	EIF5B	100	88.943	Vulpes_vulpes