EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000046950 (Gene tree)
Gene ID: 100912481
Gene Symbol: LOC100912481
Alias: LOC289752|MGC112874
Full Name: RNA-binding protein EWS-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 28482 bases
Position: chr4:24612205-24640686
Accession: 6486611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074472	zf-RanBP	PF00641.18	1.2e-12	1	1
ENSRNOP00000054193	zf-RanBP	PF00641.18	1.2e-12	1	1
ENSRNOP00000074472	RRM_1	PF00076.22	3.9e-10	1	1
ENSRNOP00000054193	RRM_1	PF00076.22	4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000057382	-	2194	XM_003749683	ENSRNOP00000054193	661 (aa)	XP_003749731	A0A140UHY3
ENSRNOT00000086607	-	1956	-	ENSRNOP00000074472	651 (aa)	-	A0A0G2K850

Gene Model

Click here to download ENSRNOG00000046950's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05202	Transcriptional misregulation in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000046950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000046950	LOC100912481	100	100.000	ENSRNOG00000009437	Ewsr1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000046950	LOC100912481	100	98.638	ENSG00000182944	EWSR1	100	98.638	Homo_sapiens
ENSRNOG00000046950	LOC100912481	69	39.293	ENSAPOG00000006531	ewsr1b	85	44.464	Acanthochromis_polyacanthus
ENSRNOG00000046950	LOC100912481	100	97.090	ENSAMEG00000008298	-	100	96.974	Ailuropoda_melanoleuca
ENSRNOG00000046950	LOC100912481	59	74.747	ENSAMEG00000009647	-	65	77.500	Ailuropoda_melanoleuca
ENSRNOG00000046950	LOC100912481	51	49.761	ENSACIG00000010829	ewsr1b	81	41.844	Amphilophus_citrinellus
ENSRNOG00000046950	LOC100912481	69	41.703	ENSAOCG00000011339	ewsr1b	82	42.275	Amphiprion_ocellaris
ENSRNOG00000046950	LOC100912481	69	41.703	ENSAPEG00000024145	ewsr1b	82	42.275	Amphiprion_percula
ENSRNOG00000046950	LOC100912481	83	78.309	ENSAPLG00000005917	EWSR1	94	77.495	Anas_platyrhynchos
ENSRNOG00000046950	LOC100912481	84	79.541	ENSACAG00000009298	EWSR1	83	78.230	Anolis_carolinensis
ENSRNOG00000046950	LOC100912481	100	83.742	ENSANAG00000036110	-	83	82.278	Aotus_nancymaae
ENSRNOG00000046950	LOC100912481	100	75.613	ENSANAG00000028041	-	85	77.491	Aotus_nancymaae
ENSRNOG00000046950	LOC100912481	100	77.266	ENSANAG00000038314	-	82	75.228	Aotus_nancymaae
ENSRNOG00000046950	LOC100912481	100	98.487	ENSANAG00000032368	EWSR1	100	98.487	Aotus_nancymaae
ENSRNOG00000046950	LOC100912481	91	82.234	ENSANAG00000037725	-	75	81.250	Aotus_nancymaae
ENSRNOG00000046950	LOC100912481	100	98.033	ENSBTAG00000017755	EWSR1	100	98.033	Bos_taurus
ENSRNOG00000046950	LOC100912481	100	98.638	ENSCJAG00000019987	EWSR1	100	98.638	Callithrix_jacchus
ENSRNOG00000046950	LOC100912481	70	91.667	ENSCJAG00000047628	-	72	89.035	Callithrix_jacchus
ENSRNOG00000046950	LOC100912481	85	70.390	ENSCAFG00000000749	-	82	75.045	Canis_familiaris
ENSRNOG00000046950	LOC100912481	100	90.184	ENSCAFG00000017391	-	83	88.214	Canis_familiaris
ENSRNOG00000046950	LOC100912481	84	69.653	ENSCAFG00000007811	-	82	63.423	Canis_familiaris
ENSRNOG00000046950	LOC100912481	76	92.757	ENSCAFG00000012398	-	87	93.235	Canis_familiaris
ENSRNOG00000046950	LOC100912481	100	95.952	ENSCAFG00000012160	-	99	95.952	Canis_familiaris
ENSRNOG00000046950	LOC100912481	84	79.891	ENSCAFG00020007816	-	81	79.705	Canis_lupus_dingo
ENSRNOG00000046950	LOC100912481	99	90.462	ENSCAFG00020027556	-	82	88.376	Canis_lupus_dingo
ENSRNOG00000046950	LOC100912481	100	97.546	ENSCAFG00020002899	-	99	97.546	Canis_lupus_dingo
ENSRNOG00000046950	LOC100912481	89	90.378	ENSCAFG00020021066	-	98	90.068	Canis_lupus_dingo
ENSRNOG00000046950	LOC100912481	98	95.141	ENSCHIG00000007090	EWSR1	98	95.141	Capra_hircus
ENSRNOG00000046950	LOC100912481	100	98.638	ENSTSYG00000003407	EWSR1	100	98.638	Carlito_syrichta
ENSRNOG00000046950	LOC100912481	100	96.672	ENSCPOG00000009502	EWSR1	100	96.672	Cavia_porcellus
ENSRNOG00000046950	LOC100912481	82	88.433	ENSCCAG00000012734	-	73	87.354	Cebus_capucinus
ENSRNOG00000046950	LOC100912481	100	86.196	ENSCCAG00000002555	-	82	88.029	Cebus_capucinus
ENSRNOG00000046950	LOC100912481	100	98.638	ENSCCAG00000035490	EWSR1	100	98.638	Cebus_capucinus
ENSRNOG00000046950	LOC100912481	100	80.184	ENSCCAG00000025662	-	82	80.627	Cebus_capucinus
ENSRNOG00000046950	LOC100912481	100	98.638	ENSCATG00000037756	EWSR1	100	98.638	Cercocebus_atys
ENSRNOG00000046950	LOC100912481	100	98.185	ENSCLAG00000006466	EWSR1	100	98.185	Chinchilla_lanigera
ENSRNOG00000046950	LOC100912481	59	98.168	ENSCSAG00000009820	EWSR1	100	98.168	Chlorocebus_sabaeus
ENSRNOG00000046950	LOC100912481	75	86.957	ENSCHOG00000009549	-	87	68.593	Choloepus_hoffmanni
ENSRNOG00000046950	LOC100912481	78	96.617	ENSCHOG00000013553	-	72	96.617	Choloepus_hoffmanni
ENSRNOG00000046950	LOC100912481	79	87.192	ENSCPBG00000018002	EWSR1	81	81.710	Chrysemys_picta_bellii
ENSRNOG00000046950	LOC100912481	96	96.497	ENSCANG00000034463	EWSR1	99	96.497	Colobus_angolensis_palliatus
ENSRNOG00000046950	LOC100912481	100	99.092	ENSCGRG00001008309	Ewsr1	100	99.092	Cricetulus_griseus_chok1gshd
ENSRNOG00000046950	LOC100912481	100	99.092	ENSCGRG00000008951	Ewsr1	100	99.092	Cricetulus_griseus_crigri
ENSRNOG00000046950	LOC100912481	84	45.105	ENSCSEG00000015972	EWSR1	87	43.333	Cynoglossus_semilaevis
ENSRNOG00000046950	LOC100912481	64	62.338	ENSDARG00000117011	ewsr1b	78	85.714	Danio_rerio
ENSRNOG00000046950	LOC100912481	84	88.628	ENSDNOG00000018710	-	83	86.101	Dasypus_novemcinctus
ENSRNOG00000046950	LOC100912481	83	88.376	ENSETEG00000003856	EWSR1	83	89.483	Echinops_telfairi
ENSRNOG00000046950	LOC100912481	100	98.618	ENSEASG00005010055	EWSR1	100	97.731	Equus_asinus_asinus
ENSRNOG00000046950	LOC100912481	100	98.618	ENSECAG00000022120	EWSR1	100	97.731	Equus_caballus
ENSRNOG00000046950	LOC100912481	71	98.485	ENSEEUG00000012884	-	71	98.485	Erinaceus_europaeus
ENSRNOG00000046950	LOC100912481	100	98.336	ENSFCAG00000004243	EWSR1	100	98.336	Felis_catus
ENSRNOG00000046950	LOC100912481	83	77.500	ENSFALG00000007089	EWSR1	85	79.167	Ficedula_albicollis
ENSRNOG00000046950	LOC100912481	100	98.003	ENSFDAG00000004062	EWSR1	99	98.003	Fukomys_damarensis
ENSRNOG00000046950	LOC100912481	69	43.933	ENSFHEG00000016297	ewsr1b	82	46.261	Fundulus_heteroclitus
ENSRNOG00000046950	LOC100912481	83	46.771	ENSGMOG00000012263	ewsr1b	83	45.709	Gadus_morhua
ENSRNOG00000046950	LOC100912481	84	88.372	ENSGALG00000008149	EWSR1	81	88.014	Gallus_gallus
ENSRNOG00000046950	LOC100912481	83	44.082	ENSGACG00000008603	ewsr1b	82	45.026	Gasterosteus_aculeatus
ENSRNOG00000046950	LOC100912481	84	91.486	ENSGAGG00000014769	EWSR1	82	91.486	Gopherus_agassizii
ENSRNOG00000046950	LOC100912481	100	98.790	ENSGGOG00000012212	EWSR1	100	98.790	Gorilla_gorilla
ENSRNOG00000046950	LOC100912481	100	78.067	ENSGGOG00000038123	-	75	89.302	Gorilla_gorilla
ENSRNOG00000046950	LOC100912481	69	86.567	ENSHGLG00000000569	-	79	88.350	Heterocephalus_glaber_female
ENSRNOG00000046950	LOC100912481	100	98.310	ENSHGLG00000017920	-	99	98.310	Heterocephalus_glaber_female
ENSRNOG00000046950	LOC100912481	100	98.336	ENSHGLG00100016217	-	100	98.336	Heterocephalus_glaber_male
ENSRNOG00000046950	LOC100912481	69	86.070	ENSHGLG00100013374	-	79	87.864	Heterocephalus_glaber_male
ENSRNOG00000046950	LOC100912481	96	98.392	ENSSTOG00000023177	-	98	98.392	Ictidomys_tridecemlineatus
ENSRNOG00000046950	LOC100912481	98	60.656	ENSSTOG00000025301	-	74	91.626	Ictidomys_tridecemlineatus
ENSRNOG00000046950	LOC100912481	78	74.275	ENSSTOG00000020479	-	79	68.821	Ictidomys_tridecemlineatus
ENSRNOG00000046950	LOC100912481	100	98.790	ENSJJAG00000003308	Ewsr1	100	98.790	Jaculus_jaculus
ENSRNOG00000046950	LOC100912481	69	38.493	ENSKMAG00000017617	ewsr1b	82	43.932	Kryptolebias_marmoratus
ENSRNOG00000046950	LOC100912481	84	64.897	ENSLACG00000008350	EWSR1	85	61.235	Latimeria_chalumnae
ENSRNOG00000046950	LOC100912481	83	58.070	ENSLOCG00000008118	ewsr1b	84	58.494	Lepisosteus_oculatus
ENSRNOG00000046950	LOC100912481	100	97.436	ENSLAFG00000015757	EWSR1	100	97.436	Loxodonta_africana
ENSRNOG00000046950	LOC100912481	100	98.638	ENSMFAG00000038861	EWSR1	100	98.638	Macaca_fascicularis
ENSRNOG00000046950	LOC100912481	98	98.284	ENSMMUG00000021374	EWSR1	99	98.284	Macaca_mulatta
ENSRNOG00000046950	LOC100912481	100	98.638	ENSMNEG00000036277	EWSR1	100	98.638	Macaca_nemestrina
ENSRNOG00000046950	LOC100912481	100	98.638	ENSMLEG00000016144	EWSR1	100	98.638	Mandrillus_leucophaeus
ENSRNOG00000046950	LOC100912481	66	38.166	ENSMAMG00000016510	ewsr1b	82	45.704	Mastacembelus_armatus
ENSRNOG00000046950	LOC100912481	83	86.933	ENSMGAG00000005282	EWSR1	82	84.936	Meleagris_gallopavo
ENSRNOG00000046950	LOC100912481	100	85.253	ENSMAUG00000004398	-	84	86.594	Mesocricetus_auratus
ENSRNOG00000046950	LOC100912481	78	91.569	ENSMICG00000028701	-	88	91.569	Microcebus_murinus
ENSRNOG00000046950	LOC100912481	99	82.589	ENSMICG00000004264	-	86	76.782	Microcebus_murinus
ENSRNOG00000046950	LOC100912481	100	95.552	ENSMICG00000028934	-	100	94.713	Microcebus_murinus
ENSRNOG00000046950	LOC100912481	84	70.833	ENSMICG00000026933	-	82	89.222	Microcebus_murinus
ENSRNOG00000046950	LOC100912481	100	98.464	ENSMOCG00000013671	-	99	98.464	Microtus_ochrogaster
ENSRNOG00000046950	LOC100912481	100	82.901	ENSMODG00000010492	-	85	84.432	Monodelphis_domestica
ENSRNOG00000046950	LOC100912481	84	93.153	ENSMODG00000008679	-	84	92.793	Monodelphis_domestica
ENSRNOG00000046950	LOC100912481	100	98.941	MGP_CAROLIEiJ_G0016047	Ewsr1	100	98.941	Mus_caroli
ENSRNOG00000046950	LOC100912481	100	98.336	ENSMUSG00000009079	Ewsr1	100	98.336	Mus_musculus
ENSRNOG00000046950	LOC100912481	100	94.554	MGP_PahariEiJ_G0016844	Ewsr1	100	94.554	Mus_pahari
ENSRNOG00000046950	LOC100912481	100	98.790	MGP_SPRETEiJ_G0016889	Ewsr1	100	98.790	Mus_spretus
ENSRNOG00000046950	LOC100912481	69	89.602	ENSMPUG00000019174	-	82	89.602	Mustela_putorius_furo
ENSRNOG00000046950	LOC100912481	100	97.856	ENSMPUG00000013432	-	100	96.983	Mustela_putorius_furo
ENSRNOG00000046950	LOC100912481	100	88.218	ENSMLUG00000027802	-	84	87.884	Myotis_lucifugus
ENSRNOG00000046950	LOC100912481	100	96.336	ENSMLUG00000012058	-	99	96.336	Myotis_lucifugus
ENSRNOG00000046950	LOC100912481	100	98.790	ENSNGAG00000012255	Ewsr1	100	98.790	Nannospalax_galili
ENSRNOG00000046950	LOC100912481	98	96.714	ENSNLEG00000002641	EWSR1	100	98.423	Nomascus_leucogenys
ENSRNOG00000046950	LOC100912481	76	76.190	ENSMEUG00000013663	-	87	67.865	Notamacropus_eugenii
ENSRNOG00000046950	LOC100912481	93	58.755	ENSMEUG00000002729	-	86	70.175	Notamacropus_eugenii
ENSRNOG00000046950	LOC100912481	89	86.278	ENSMEUG00000008703	-	100	86.278	Notamacropus_eugenii
ENSRNOG00000046950	LOC100912481	100	69.892	ENSODEG00000003371	-	83	66.184	Octodon_degus
ENSRNOG00000046950	LOC100912481	84	86.257	ENSODEG00000004433	-	83	85.895	Octodon_degus
ENSRNOG00000046950	LOC100912481	100	97.731	ENSODEG00000017496	-	100	97.731	Octodon_degus
ENSRNOG00000046950	LOC100912481	100	92.998	ENSOANG00000001304	EWSR1	84	92.727	Ornithorhynchus_anatinus
ENSRNOG00000046950	LOC100912481	89	77.029	ENSOCUG00000023130	-	85	75.725	Oryctolagus_cuniculus
ENSRNOG00000046950	LOC100912481	100	96.942	ENSOCUG00000004432	-	87	96.942	Oryctolagus_cuniculus
ENSRNOG00000046950	LOC100912481	100	96.166	ENSOCUG00000027270	-	83	95.764	Oryctolagus_cuniculus
ENSRNOG00000046950	LOC100912481	69	42.316	ENSOMEG00000002003	ewsr1b	82	45.201	Oryzias_melastigma
ENSRNOG00000046950	LOC100912481	100	98.487	ENSOGAG00000012489	EWSR1	100	98.487	Otolemur_garnettii
ENSRNOG00000046950	LOC100912481	100	95.566	ENSOARG00000003642	EWSR1	99	95.566	Ovis_aries
ENSRNOG00000046950	LOC100912481	84	77.396	ENSPPAG00000035278	-	80	88.780	Pan_paniscus
ENSRNOG00000046950	LOC100912481	100	98.790	ENSPPAG00000032867	EWSR1	100	98.790	Pan_paniscus
ENSRNOG00000046950	LOC100912481	100	98.185	ENSPPRG00000009859	-	100	98.185	Panthera_pardus
ENSRNOG00000046950	LOC100912481	84	85.507	ENSPPRG00000003780	-	100	87.897	Panthera_pardus
ENSRNOG00000046950	LOC100912481	100	98.336	ENSPTIG00000008375	EWSR1	100	98.336	Panthera_tigris_altaica
ENSRNOG00000046950	LOC100912481	100	98.790	ENSPTRG00000014218	EWSR1	100	98.790	Pan_troglodytes
ENSRNOG00000046950	LOC100912481	100	74.847	ENSPTRG00000048937	-	51	84.411	Pan_troglodytes
ENSRNOG00000046950	LOC100912481	100	98.638	ENSPANG00000026055	EWSR1	100	98.638	Papio_anubis
ENSRNOG00000046950	LOC100912481	70	44.807	ENSPKIG00000011381	-	83	49.123	Paramormyrops_kingsleyae
ENSRNOG00000046950	LOC100912481	84	50.493	ENSPKIG00000022955	ewsr1b	85	50.664	Paramormyrops_kingsleyae
ENSRNOG00000046950	LOC100912481	84	85.510	ENSPSIG00000004329	EWSR1	84	85.868	Pelodiscus_sinensis
ENSRNOG00000046950	LOC100912481	100	99.092	ENSPEMG00000018724	Ewsr1	100	99.092	Peromyscus_maniculatus_bairdii
ENSRNOG00000046950	LOC100912481	86	96.226	ENSPCIG00000006189	EWSR1	83	92.125	Phascolarctos_cinereus
ENSRNOG00000046950	LOC100912481	76	80.645	ENSPPYG00000000560	-	87	69.779	Pongo_abelii
ENSRNOG00000046950	LOC100912481	100	98.790	ENSPPYG00000011684	EWSR1	100	98.790	Pongo_abelii
ENSRNOG00000046950	LOC100912481	100	96.073	ENSPCAG00000010966	EWSR1	100	96.073	Procavia_capensis
ENSRNOG00000046950	LOC100912481	84	81.555	ENSPCOG00000025789	-	89	87.862	Propithecus_coquereli
ENSRNOG00000046950	LOC100912481	100	98.336	ENSPCOG00000024660	-	100	98.336	Propithecus_coquereli
ENSRNOG00000046950	LOC100912481	100	75.422	ENSPCOG00000008072	-	84	75.506	Propithecus_coquereli
ENSRNOG00000046950	LOC100912481	100	98.187	ENSPVAG00000009815	EWSR1	100	98.187	Pteropus_vampyrus
ENSRNOG00000046950	LOC100912481	100	91.982	ENSRBIG00000032890	EWSR1	100	91.982	Rhinopithecus_bieti
ENSRNOG00000046950	LOC100912481	100	92.485	ENSRROG00000043139	-	100	91.692	Rhinopithecus_roxellana
ENSRNOG00000046950	LOC100912481	100	98.638	ENSRROG00000040300	-	100	98.638	Rhinopithecus_roxellana
ENSRNOG00000046950	LOC100912481	84	81.227	ENSSBOG00000032932	-	82	80.331	Saimiri_boliviensis_boliviensis
ENSRNOG00000046950	LOC100912481	100	98.638	ENSSBOG00000029942	EWSR1	100	98.638	Saimiri_boliviensis_boliviensis
ENSRNOG00000046950	LOC100912481	100	89.755	ENSSBOG00000032705	-	83	90.642	Saimiri_boliviensis_boliviensis
ENSRNOG00000046950	LOC100912481	100	71.558	ENSSBOG00000026631	-	72	81.860	Saimiri_boliviensis_boliviensis
ENSRNOG00000046950	LOC100912481	84	89.397	ENSSHAG00000001435	EWSR1	82	88.007	Sarcophilus_harrisii
ENSRNOG00000046950	LOC100912481	99	82.796	ENSSARG00000008953	EWSR1	84	84.686	Sorex_araneus
ENSRNOG00000046950	LOC100912481	98	86.499	ENSSPUG00000008126	-	78	90.431	Sphenodon_punctatus
ENSRNOG00000046950	LOC100912481	69	41.921	ENSSPAG00000009675	ewsr1b	82	43.559	Stegastes_partitus
ENSRNOG00000046950	LOC100912481	98	98.459	ENSSSCG00000009974	EWSR1	100	90.785	Sus_scrofa
ENSRNOG00000046950	LOC100912481	83	72.890	ENSTGUG00000010419	EWSR1	82	70.280	Taeniopygia_guttata
ENSRNOG00000046950	LOC100912481	57	85.238	ENSTBEG00000017623	-	51	100.000	Tupaia_belangeri
ENSRNOG00000046950	LOC100912481	100	96.375	ENSTTRG00000011881	EWSR1	100	96.375	Tursiops_truncatus
ENSRNOG00000046950	LOC100912481	98	96.389	ENSUAMG00000012259	-	100	96.389	Ursus_americanus
ENSRNOG00000046950	LOC100912481	100	98.006	ENSUMAG00000016019	-	100	97.130	Ursus_maritimus
ENSRNOG00000046950	LOC100912481	100	79.294	ENSVVUG00000016473	-	87	89.811	Vulpes_vulpes
ENSRNOG00000046950	LOC100912481	82	76.735	ENSVVUG00000030142	-	100	75.691	Vulpes_vulpes
ENSRNOG00000046950	LOC100912481	83	92.791	ENSVVUG00000021137	-	92	92.196	Vulpes_vulpes
ENSRNOG00000046950	LOC100912481	89	86.598	ENSVVUG00000006285	-	89	88.766	Vulpes_vulpes
ENSRNOG00000046950	LOC100912481	83	63.979	ENSXETG00000024796	ewsr1	84	67.478	Xenopus_tropicalis
ENSRNOG00000046950	LOC100912481	68	40.781	ENSXCOG00000017341	ewsr1b	69	49.091	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function