EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000047294 (Gene tree)
Gene ID: -
Gene Symbol: AABR07043115.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 5311 bases
Position: chr19:21964793-21970103
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065391	RVT_1	PF00078.27	1.7e-54	1	1
ENSRNOP00000065391	Transposase_22	PF02994.14	1.1e-46	1	1
ENSRNOP00000065391	Exo_endo_phos	PF03372.23	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074210	AABR07043115.1-201	4845	-	ENSRNOP00000065391	1615 (aa)	-	M0R7G2

Gene Model

Click here to download ENSRNOG00000047294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000047294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000047294	AABR07043115.1	58	92.432	ENSRNOG00000034030	AC130162.1	71	92.432
ENSRNOG00000047294	AABR07043115.1	100	98.204	ENSRNOG00000058209	AABR07063893.1	99	98.204
ENSRNOG00000047294	AABR07043115.1	100	99.257	ENSRNOG00000059691	AABR07033318.1	94	99.257
ENSRNOG00000047294	AABR07043115.1	100	98.328	ENSRNOG00000054519	AABR07053179.1	94	98.328
ENSRNOG00000047294	AABR07043115.1	100	98.331	ENSRNOG00000059133	AABR07020537.1	97	98.331
ENSRNOG00000047294	AABR07043115.1	100	97.957	ENSRNOG00000049504	AABR07009221.1	95	97.957
ENSRNOG00000047294	AABR07043115.1	62	99.064	ENSRNOG00000057039	AC124874.1	92	99.064
ENSRNOG00000047294	AABR07043115.1	99	98.321	ENSRNOG00000056748	AC229945.1	100	98.321
ENSRNOG00000047294	AABR07043115.1	59	93.995	ENSRNOG00000060618	AABR07027267.1	69	98.895
ENSRNOG00000047294	AABR07043115.1	100	97.712	ENSRNOG00000056033	AC111632.2	97	97.712
ENSRNOG00000047294	AABR07043115.1	50	94.719	ENSRNOG00000055486	AABR07025316.1	99	94.719
ENSRNOG00000047294	AABR07043115.1	55	95.956	ENSRNOG00000005861	Hsd11b1	79	95.956
ENSRNOG00000047294	AABR07043115.1	58	93.298	ENSRNOG00000045583	AABR07002068.1	69	98.295
ENSRNOG00000047294	AABR07043115.1	58	93.298	ENSRNOG00000058277	AC080157.1	69	98.295
ENSRNOG00000047294	AABR07043115.1	100	99.133	ENSRNOG00000060742	AABR07029809.1	99	99.133

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000047294	AABR07043115.1	73	63.342	ENSBTAG00000050912	-	92	63.342	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	50	66.173	ENSBTAG00000052047	-	100	66.173	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	63	64.012	ENSBTAG00000054392	-	97	64.012	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	69	63.252	ENSBTAG00000053324	-	93	63.252	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	52	67.092	ENSBTAG00000052305	-	89	67.092	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	53	65.217	ENSBTAG00000054826	-	98	65.217	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	73	63.522	ENSBTAG00000049649	-	92	63.751	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	65	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	52	65.643	ENSBTAG00000051119	-	97	65.643	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	73	63.342	ENSBTAG00000050847	-	92	63.342	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	73	63.432	ENSBTAG00000053316	-	92	63.432	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	71	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	55	65.306	ENSBTAG00000051121	-	99	65.306	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	69	63.522	ENSBTAG00000051208	-	92	63.522	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	63	64.278	ENSBTAG00000050534	-	91	64.278	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	67	64.012	ENSBTAG00000049055	-	92	64.012	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	57	65.335	ENSBTAG00000055052	-	99	65.335	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	73	63.252	ENSBTAG00000051842	-	92	63.252	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	55	65.840	ENSBTAG00000049728	-	99	65.840	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	53	64.512	ENSBTAG00000050251	-	99	64.512	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	63	63.863	ENSBTAG00000054175	-	91	63.863	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	73	63.252	ENSBTAG00000050965	-	92	63.252	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	53	65.425	ENSBTAG00000051999	-	99	65.731	Bos_taurus
ENSRNOG00000047294	AABR07043115.1	56	66.268	ENSCHIG00000008419	-	90	66.268	Capra_hircus
ENSRNOG00000047294	AABR07043115.1	53	66.459	ENSCHIG00000008599	-	90	66.459	Capra_hircus
ENSRNOG00000047294	AABR07043115.1	73	75.518	ENSCGRG00000019476	-	92	75.518	Cricetulus_griseus_crigri
ENSRNOG00000047294	AABR07043115.1	68	75.725	ENSCGRG00000019462	-	92	75.725	Cricetulus_griseus_crigri
ENSRNOG00000047294	AABR07043115.1	73	75.518	ENSCGRG00000019173	-	91	75.518	Cricetulus_griseus_crigri
ENSRNOG00000047294	AABR07043115.1	73	75.518	ENSCGRG00000018654	-	91	75.518	Cricetulus_griseus_crigri
ENSRNOG00000047294	AABR07043115.1	69	75.518	ENSCGRG00000018650	-	89	75.518	Cricetulus_griseus_crigri
ENSRNOG00000047294	AABR07043115.1	65	64.539	ENSOCUG00000029721	-	91	64.539	Oryctolagus_cuniculus
ENSRNOG00000047294	AABR07043115.1	65	62.786	ENSOCUG00000029631	-	100	62.786	Oryctolagus_cuniculus
ENSRNOG00000047294	AABR07043115.1	73	63.522	ENSOARG00000010889	-	92	63.522	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	51	67.232	ENSOARG00000006683	-	88	67.232	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	66	63.861	ENSOARG00000008210	-	89	63.861	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	67	63.913	ENSOARG00000005813	-	92	63.913	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	73	63.432	ENSOARG00000000057	-	92	63.432	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	73	63.432	ENSOARG00000001175	-	92	63.432	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	57	63.147	ENSOARG00000011096	-	84	63.147	Ovis_aries
ENSRNOG00000047294	AABR07043115.1	55	64.932	ENSSSCG00000035697	-	91	64.892	Sus_scrofa
ENSRNOG00000047294	AABR07043115.1	73	64.029	ENSSSCG00000039414	-	92	64.029	Sus_scrofa
ENSRNOG00000047294	AABR07043115.1	73	65.574	ENSSSCG00000040939	-	92	65.574	Sus_scrofa
ENSRNOG00000047294	AABR07043115.1	69	63.849	ENSSSCG00000036442	-	95	63.849	Sus_scrofa
ENSRNOG00000047294	AABR07043115.1	51	65.659	ENSSSCG00000037083	-	99	65.659	Sus_scrofa
ENSRNOG00000047294	AABR07043115.1	54	66.625	ENSSSCG00000040911	-	88	66.625	Sus_scrofa