EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000047575 (Gene tree)
Gene ID: 684903
Gene Symbol: Dhx34
Alias: LOC684903
Full Name: DExH-box helicase 34
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 22445 bases
Position: chr1:78090044-78112488
Accession: 1584452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066304	HA2	PF04408.23	4.1e-16	1	1
ENSRNOP00000071819	HA2	PF04408.23	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075327	-	3562	-	ENSRNOP00000066304	1102 (aa)	-	M0R9X1
ENSRNOT00000089718	-	3862	-	ENSRNOP00000071819	1129 (aa)	-	A0A0G2K1F5

Gene Model

Click here to download ENSRNOG00000047575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000047575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000047575	Dhx34	52	34.057	ENSRNOG00000015928	Dhx35	85	34.057
ENSRNOG00000047575	Dhx34	51	36.116	ENSRNOG00000003844	Dhx15	71	36.192
ENSRNOG00000047575	Dhx34	51	33.117	ENSRNOG00000002735	Dhx9	52	33.117
ENSRNOG00000047575	Dhx34	58	32.316	ENSRNOG00000014599	Dhx36	64	34.158
ENSRNOG00000047575	Dhx34	50	37.925	ENSRNOG00000030157	Dhx16	53	39.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000047575	Dhx34	99	87.851	ENSG00000134815	DHX34	96	87.579	Homo_sapiens
ENSRNOG00000047575	Dhx34	96	63.528	ENSAPOG00000012602	dhx34	94	63.528	Acanthochromis_polyacanthus
ENSRNOG00000047575	Dhx34	99	84.783	ENSAMEG00000008270	DHX34	96	84.692	Ailuropoda_melanoleuca
ENSRNOG00000047575	Dhx34	97	61.874	ENSACIG00000024038	dhx34	98	60.885	Amphilophus_citrinellus
ENSRNOG00000047575	Dhx34	96	63.379	ENSAOCG00000006310	dhx34	94	63.379	Amphiprion_ocellaris
ENSRNOG00000047575	Dhx34	99	61.821	ENSAPEG00000013725	dhx34	94	63.379	Amphiprion_percula
ENSRNOG00000047575	Dhx34	96	61.405	ENSATEG00000009105	dhx34	97	60.391	Anabas_testudineus
ENSRNOG00000047575	Dhx34	78	68.641	ENSACAG00000004112	DHX34	91	68.641	Anolis_carolinensis
ENSRNOG00000047575	Dhx34	99	86.582	ENSANAG00000038287	DHX34	96	86.401	Aotus_nancymaae
ENSRNOG00000047575	Dhx34	96	62.202	ENSACLG00000021819	dhx34	97	61.017	Astatotilapia_calliptera
ENSRNOG00000047575	Dhx34	97	61.076	ENSAMXG00000019705	dhx34	96	61.076	Astyanax_mexicanus
ENSRNOG00000047575	Dhx34	99	85.947	ENSBTAG00000006848	DHX34	96	85.857	Bos_taurus
ENSRNOG00000047575	Dhx34	74	45.324	WBGene00021365	smgl-2	82	42.637	Caenorhabditis_elegans
ENSRNOG00000047575	Dhx34	99	86.945	ENSCJAG00000011504	DHX34	94	86.763	Callithrix_jacchus
ENSRNOG00000047575	Dhx34	99	87.114	ENSCAFG00000004170	DHX34	96	86.491	Canis_familiaris
ENSRNOG00000047575	Dhx34	99	86.933	ENSCAFG00020001163	DHX34	96	86.842	Canis_lupus_dingo
ENSRNOG00000047575	Dhx34	99	86.413	ENSCHIG00000024526	DHX34	96	86.413	Capra_hircus
ENSRNOG00000047575	Dhx34	99	82.033	ENSTSYG00000031168	DHX34	96	82.123	Carlito_syrichta
ENSRNOG00000047575	Dhx34	99	83.106	ENSCAPG00000014599	DHX34	96	83.560	Cavia_aperea
ENSRNOG00000047575	Dhx34	99	83.956	ENSCPOG00000006510	DHX34	96	83.865	Cavia_porcellus
ENSRNOG00000047575	Dhx34	99	85.675	ENSCCAG00000028675	DHX34	96	85.494	Cebus_capucinus
ENSRNOG00000047575	Dhx34	99	85.520	ENSCATG00000032316	DHX34	96	85.339	Cercocebus_atys
ENSRNOG00000047575	Dhx34	99	84.505	ENSCLAG00000000906	DHX34	96	84.400	Chinchilla_lanigera
ENSRNOG00000047575	Dhx34	99	85.131	ENSCSAG00000002965	DHX34	96	84.950	Chlorocebus_sabaeus
ENSRNOG00000047575	Dhx34	95	50.471	ENSCING00000004681	-	96	50.422	Ciona_intestinalis
ENSRNOG00000047575	Dhx34	96	50.748	ENSCSAVG00000009685	-	100	67.647	Ciona_savignyi
ENSRNOG00000047575	Dhx34	99	87.579	ENSCANG00000037215	DHX34	96	87.398	Colobus_angolensis_palliatus
ENSRNOG00000047575	Dhx34	96	60.822	ENSCSEG00000007100	dhx34	94	60.822	Cynoglossus_semilaevis
ENSRNOG00000047575	Dhx34	96	62.774	ENSCVAG00000002423	dhx34	97	61.613	Cyprinodon_variegatus
ENSRNOG00000047575	Dhx34	97	61.066	ENSDARG00000061168	dhx34	95	61.066	Danio_rerio
ENSRNOG00000047575	Dhx34	99	75.000	ENSDNOG00000031738	DHX34	96	75.000	Dasypus_novemcinctus
ENSRNOG00000047575	Dhx34	99	81.859	ENSDORG00000008437	Dhx34	96	81.588	Dipodomys_ordii
ENSRNOG00000047575	Dhx34	87	46.029	FBgn0052533	CG32533	85	45.927	Drosophila_melanogaster
ENSRNOG00000047575	Dhx34	62	84.906	ENSETEG00000013686	-	60	84.906	Echinops_telfairi
ENSRNOG00000047575	Dhx34	96	54.374	ENSEBUG00000014272	dhx34	98	53.804	Eptatretus_burgeri
ENSRNOG00000047575	Dhx34	99	85.986	ENSEASG00005004155	DHX34	96	86.076	Equus_asinus_asinus
ENSRNOG00000047575	Dhx34	99	85.986	ENSECAG00000011354	DHX34	96	87.119	Equus_caballus
ENSRNOG00000047575	Dhx34	82	95.192	ENSEEUG00000009027	DHX34	85	95.192	Erinaceus_europaeus
ENSRNOG00000047575	Dhx34	96	62.635	ENSELUG00000021992	dhx34	94	62.883	Esox_lucius
ENSRNOG00000047575	Dhx34	99	85.209	ENSFCAG00000006144	DHX34	96	85.118	Felis_catus
ENSRNOG00000047575	Dhx34	84	79.480	ENSFDAG00000014928	DHX34	92	79.335	Fukomys_damarensis
ENSRNOG00000047575	Dhx34	95	62.407	ENSFHEG00000000517	dhx34	98	61.096	Fundulus_heteroclitus
ENSRNOG00000047575	Dhx34	96	62.190	ENSGMOG00000013400	dhx34	95	62.282	Gadus_morhua
ENSRNOG00000047575	Dhx34	96	61.722	ENSGACG00000013085	dhx34	100	79.710	Gasterosteus_aculeatus
ENSRNOG00000047575	Dhx34	69	72.272	ENSGAGG00000008776	DHX34	93	72.846	Gopherus_agassizii
ENSRNOG00000047575	Dhx34	99	83.772	ENSGGOG00000010037	DHX34	96	83.500	Gorilla_gorilla
ENSRNOG00000047575	Dhx34	96	62.202	ENSHBUG00000009820	dhx34	97	61.121	Haplochromis_burtoni
ENSRNOG00000047575	Dhx34	99	84.692	ENSHGLG00000004917	DHX34	96	84.601	Heterocephalus_glaber_female
ENSRNOG00000047575	Dhx34	99	84.783	ENSHGLG00100017146	DHX34	96	84.692	Heterocephalus_glaber_male
ENSRNOG00000047575	Dhx34	96	61.623	ENSHCOG00000017578	dhx34	94	61.714	Hippocampus_comes
ENSRNOG00000047575	Dhx34	97	59.087	ENSIPUG00000000655	Dhx34	95	59.087	Ictalurus_punctatus
ENSRNOG00000047575	Dhx34	99	88.698	ENSSTOG00000015831	DHX34	96	88.517	Ictidomys_tridecemlineatus
ENSRNOG00000047575	Dhx34	97	58.696	ENSLBEG00000018430	dhx34	94	58.696	Labrus_bergylta
ENSRNOG00000047575	Dhx34	88	64.765	ENSLACG00000014421	DHX34	99	64.765	Latimeria_chalumnae
ENSRNOG00000047575	Dhx34	97	62.443	ENSLOCG00000014928	dhx34	94	62.029	Lepisosteus_oculatus
ENSRNOG00000047575	Dhx34	99	81.481	ENSLAFG00000003186	DHX34	96	81.210	Loxodonta_africana
ENSRNOG00000047575	Dhx34	99	87.489	ENSMFAG00000032991	DHX34	96	87.307	Macaca_fascicularis
ENSRNOG00000047575	Dhx34	99	87.670	ENSMMUG00000009275	DHX34	96	87.489	Macaca_mulatta
ENSRNOG00000047575	Dhx34	99	87.489	ENSMNEG00000038649	DHX34	96	87.307	Macaca_nemestrina
ENSRNOG00000047575	Dhx34	82	88.840	ENSMLEG00000041860	DHX34	96	88.619	Mandrillus_leucophaeus
ENSRNOG00000047575	Dhx34	96	62.132	ENSMAMG00000014106	dhx34	92	62.123	Mastacembelus_armatus
ENSRNOG00000047575	Dhx34	96	62.110	ENSMZEG00005024153	dhx34	97	60.928	Maylandia_zebra
ENSRNOG00000047575	Dhx34	99	93.460	ENSMAUG00000013394	Dhx34	96	93.460	Mesocricetus_auratus
ENSRNOG00000047575	Dhx34	99	86.618	ENSMICG00000011585	DHX34	96	86.438	Microcebus_murinus
ENSRNOG00000047575	Dhx34	99	93.279	ENSMOCG00000016843	Dhx34	96	93.279	Microtus_ochrogaster
ENSRNOG00000047575	Dhx34	97	61.349	ENSMMOG00000001357	dhx34	95	61.349	Mola_mola
ENSRNOG00000047575	Dhx34	99	74.727	ENSMODG00000008850	DHX34	95	75.114	Monodelphis_domestica
ENSRNOG00000047575	Dhx34	96	62.088	ENSMALG00000008883	dhx34	94	62.088	Monopterus_albus
ENSRNOG00000047575	Dhx34	99	96.830	MGP_CAROLIEiJ_G0029226	Dhx34	96	96.830	Mus_caroli
ENSRNOG00000047575	Dhx34	99	96.558	ENSMUSG00000006019	Dhx34	96	96.558	Mus_musculus
ENSRNOG00000047575	Dhx34	99	96.014	MGP_PahariEiJ_G0021082	Dhx34	96	96.014	Mus_pahari
ENSRNOG00000047575	Dhx34	99	96.830	MGP_SPRETEiJ_G0030305	Dhx34	96	96.830	Mus_spretus
ENSRNOG00000047575	Dhx34	96	84.746	ENSMPUG00000004925	DHX34	98	84.746	Mustela_putorius_furo
ENSRNOG00000047575	Dhx34	99	87.967	ENSMLUG00000013743	DHX34	96	87.920	Myotis_lucifugus
ENSRNOG00000047575	Dhx34	99	90.628	ENSNGAG00000012974	Dhx34	96	90.446	Nannospalax_galili
ENSRNOG00000047575	Dhx34	99	83.454	ENSNLEG00000003010	DHX34	96	83.183	Nomascus_leucogenys
ENSRNOG00000047575	Dhx34	98	66.820	ENSMEUG00000005067	DHX34	95	66.944	Notamacropus_eugenii
ENSRNOG00000047575	Dhx34	88	82.353	ENSOPRG00000011872	-	85	82.238	Ochotona_princeps
ENSRNOG00000047575	Dhx34	99	83.710	ENSODEG00000006333	DHX34	96	83.439	Octodon_degus
ENSRNOG00000047575	Dhx34	96	62.396	ENSONIG00000004067	dhx34	97	61.305	Oreochromis_niloticus
ENSRNOG00000047575	Dhx34	77	63.395	ENSOANG00000000569	-	96	64.455	Ornithorhynchus_anatinus
ENSRNOG00000047575	Dhx34	99	86.285	ENSOCUG00000014005	DHX34	96	86.104	Oryctolagus_cuniculus
ENSRNOG00000047575	Dhx34	96	62.340	ENSORLG00000002308	dhx34	94	62.249	Oryzias_latipes
ENSRNOG00000047575	Dhx34	96	62.157	ENSORLG00020017122	dhx34	96	60.870	Oryzias_latipes_hni
ENSRNOG00000047575	Dhx34	96	62.249	ENSORLG00015005813	dhx34	97	60.958	Oryzias_latipes_hsok
ENSRNOG00000047575	Dhx34	97	62.295	ENSOMEG00000001279	dhx34	97	61.339	Oryzias_melastigma
ENSRNOG00000047575	Dhx34	99	87.772	ENSOGAG00000002061	DHX34	96	87.681	Otolemur_garnettii
ENSRNOG00000047575	Dhx34	81	90.909	ENSOARG00000011049	DHX34	92	84.730	Ovis_aries
ENSRNOG00000047575	Dhx34	99	83.786	ENSPPAG00000029582	DHX34	96	83.514	Pan_paniscus
ENSRNOG00000047575	Dhx34	99	85.027	ENSPPRG00000002535	DHX34	96	84.936	Panthera_pardus
ENSRNOG00000047575	Dhx34	99	69.518	ENSPTIG00000018435	DHX34	97	69.810	Panthera_tigris_altaica
ENSRNOG00000047575	Dhx34	99	87.670	ENSPTRG00000011207	DHX34	96	87.398	Pan_troglodytes
ENSRNOG00000047575	Dhx34	99	88.033	ENSPANG00000011774	DHX34	96	87.851	Papio_anubis
ENSRNOG00000047575	Dhx34	97	62.228	ENSPKIG00000013394	dhx34	96	61.416	Paramormyrops_kingsleyae
ENSRNOG00000047575	Dhx34	97	61.187	ENSPMGG00000016033	dhx34	96	61.187	Periophthalmus_magnuspinnatus
ENSRNOG00000047575	Dhx34	99	93.598	ENSPEMG00000017613	Dhx34	96	93.778	Peromyscus_maniculatus_bairdii
ENSRNOG00000047575	Dhx34	95	58.412	ENSPMAG00000000368	dhx34	97	58.412	Petromyzon_marinus
ENSRNOG00000047575	Dhx34	98	75.046	ENSPCIG00000000889	DHX34	91	79.198	Phascolarctos_cinereus
ENSRNOG00000047575	Dhx34	99	61.311	ENSPFOG00000011417	dhx34	97	60.692	Poecilia_formosa
ENSRNOG00000047575	Dhx34	98	60.956	ENSPLAG00000021500	dhx34	97	60.426	Poecilia_latipinna
ENSRNOG00000047575	Dhx34	98	61.226	ENSPMEG00000008135	dhx34	97	60.692	Poecilia_mexicana
ENSRNOG00000047575	Dhx34	98	61.317	ENSPREG00000016403	dhx34	95	61.883	Poecilia_reticulata
ENSRNOG00000047575	Dhx34	99	87.398	ENSPPYG00000010172	DHX34	96	87.126	Pongo_abelii
ENSRNOG00000047575	Dhx34	86	87.500	ENSPCAG00000003843	DHX34	83	87.500	Procavia_capensis
ENSRNOG00000047575	Dhx34	99	87.851	ENSPCOG00000027801	DHX34	96	87.579	Propithecus_coquereli
ENSRNOG00000047575	Dhx34	78	85.550	ENSPVAG00000004017	DHX34	95	85.550	Pteropus_vampyrus
ENSRNOG00000047575	Dhx34	96	62.294	ENSPNYG00000007967	dhx34	97	61.106	Pundamilia_nyererei
ENSRNOG00000047575	Dhx34	97	61.017	ENSPNAG00000015028	dhx34	97	60.228	Pygocentrus_nattereri
ENSRNOG00000047575	Dhx34	99	86.049	ENSRBIG00000037382	DHX34	96	85.869	Rhinopithecus_bieti
ENSRNOG00000047575	Dhx34	99	87.217	ENSRROG00000042872	DHX34	96	87.035	Rhinopithecus_roxellana
ENSRNOG00000047575	Dhx34	99	87.035	ENSSBOG00000026147	DHX34	96	87.588	Saimiri_boliviensis_boliviensis
ENSRNOG00000047575	Dhx34	96	63.306	ENSSFOG00015023082	dhx34	95	63.306	Scleropages_formosus
ENSRNOG00000047575	Dhx34	98	61.151	ENSSMAG00000000815	dhx34	96	61.679	Scophthalmus_maximus
ENSRNOG00000047575	Dhx34	90	64.047	ENSSDUG00000021018	dhx34	93	64.047	Seriola_dumerili
ENSRNOG00000047575	Dhx34	96	61.953	ENSSLDG00000005497	dhx34	94	61.953	Seriola_lalandi_dorsalis
ENSRNOG00000047575	Dhx34	76	70.342	ENSSPUG00000012308	DHX34	96	70.497	Sphenodon_punctatus
ENSRNOG00000047575	Dhx34	97	62.534	ENSSPAG00000023353	dhx34	97	62.523	Stegastes_partitus
ENSRNOG00000047575	Dhx34	86	82.741	ENSSSCG00000003114	DHX34	99	81.549	Sus_scrofa
ENSRNOG00000047575	Dhx34	96	59.269	ENSTRUG00000010539	dhx34	94	59.269	Takifugu_rubripes
ENSRNOG00000047575	Dhx34	96	61.299	ENSTNIG00000016288	dhx34	100	79.710	Tetraodon_nigroviridis
ENSRNOG00000047575	Dhx34	82	90.476	ENSTBEG00000007047	DHX34	79	90.476	Tupaia_belangeri
ENSRNOG00000047575	Dhx34	99	82.262	ENSTTRG00000002257	DHX34	96	82.262	Tursiops_truncatus
ENSRNOG00000047575	Dhx34	99	84.796	ENSUAMG00000020189	DHX34	96	84.706	Ursus_americanus
ENSRNOG00000047575	Dhx34	99	86.842	ENSVVUG00000023515	DHX34	96	86.751	Vulpes_vulpes
ENSRNOG00000047575	Dhx34	97	63.545	ENSXETG00000012176	dhx34	96	63.545	Xenopus_tropicalis
ENSRNOG00000047575	Dhx34	98	61.151	ENSXCOG00000009309	dhx34	95	61.287	Xiphophorus_couchianus
ENSRNOG00000047575	Dhx34	98	61.241	ENSXMAG00000007699	dhx34	97	60.585	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	21873635.	IBA	Process
GO:0000956	nuclear-transcribed mRNA catabolic process	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	21873635.	IBA	Function
GO:2000623	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	-	IEA	Process
GO:2000623	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	-	ISO	Process