EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000047692 (Gene tree)
Gene ID: 100911660
Gene Symbol: LOC100911660
Alias: LOC294071|Tbc1d12
Full Name: lymphocyte-specific helicase-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 176998 bases
Position: chr1:257614731-257791728
Accession: 6491699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000074269	ResIII	PF04851.15	3.8e-08	1	1
ENSRNOP00000064734	ResIII	PF04851.15	5.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000083183	-	4347	-	ENSRNOP00000074269	821 (aa)	-	A0A0G2K7M6
ENSRNOT00000075680	-	3164	XM_006231336	ENSRNOP00000064734	837 (aa)	XP_008758609	M0R3Y7

Gene Model

Click here to download ENSRNOG00000047692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000047692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000047692	LOC100911660	66	38.122	ENSRNOG00000017669	Chd1l	51	39.299
ENSRNOG00000047692	LOC100911660	66	37.158	ENSRNOG00000006391	Smarcad1	51	37.158
ENSRNOG00000047692	LOC100911660	100	100.000	ENSRNOG00000047104	Hells	100	100.000
ENSRNOG00000047692	LOC100911660	63	47.600	ENSRNOG00000018149	Smarca5	50	47.600
ENSRNOG00000047692	LOC100911660	65	46.614	ENSRNOG00000003762	Smarca1	51	46.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000047692	LOC100911660	100	92.092	ENSG00000119969	HELLS	100	93.277	Homo_sapiens
ENSRNOG00000047692	LOC100911660	95	66.539	ENSAPOG00000007707	hells	99	63.885	Acanthochromis_polyacanthus
ENSRNOG00000047692	LOC100911660	100	90.998	ENSAMEG00000013525	HELLS	100	90.573	Ailuropoda_melanoleuca
ENSRNOG00000047692	LOC100911660	83	68.035	ENSACIG00000018996	hells	99	66.856	Amphilophus_citrinellus
ENSRNOG00000047692	LOC100911660	96	66.667	ENSAOCG00000006348	hells	97	65.983	Amphiprion_ocellaris
ENSRNOG00000047692	LOC100911660	96	66.171	ENSAPEG00000001422	hells	97	65.501	Amphiprion_percula
ENSRNOG00000047692	LOC100911660	98	66.133	ENSATEG00000008107	hells	98	64.887	Anabas_testudineus
ENSRNOG00000047692	LOC100911660	95	81.807	ENSAPLG00000002649	HELLS	99	82.084	Anas_platyrhynchos
ENSRNOG00000047692	LOC100911660	87	74.167	ENSACAG00000028785	HELLS	96	74.167	Anolis_carolinensis
ENSRNOG00000047692	LOC100911660	100	91.596	ENSANAG00000034765	-	100	92.275	Aotus_nancymaae
ENSRNOG00000047692	LOC100911660	99	63.424	ENSACLG00000007613	hells	99	63.424	Astatotilapia_calliptera
ENSRNOG00000047692	LOC100911660	84	67.344	ENSAMXG00000002088	hells	99	67.096	Astyanax_mexicanus
ENSRNOG00000047692	LOC100911660	82	92.548	ENSBTAG00000005979	HELLS	100	92.548	Bos_taurus
ENSRNOG00000047692	LOC100911660	100	91.717	ENSCJAG00000015819	HELLS	100	92.132	Callithrix_jacchus
ENSRNOG00000047692	LOC100911660	100	90.226	ENSCAFG00000008090	HELLS	100	90.465	Canis_familiaris
ENSRNOG00000047692	LOC100911660	96	91.730	ENSCAFG00020004809	HELLS	98	91.730	Canis_lupus_dingo
ENSRNOG00000047692	LOC100911660	100	88.916	ENSCHIG00000019462	HELLS	100	88.530	Capra_hircus
ENSRNOG00000047692	LOC100911660	100	90.024	ENSTSYG00000005811	-	99	90.558	Carlito_syrichta
ENSRNOG00000047692	LOC100911660	100	89.903	ENSCPOG00000003043	HELLS	100	89.618	Cavia_porcellus
ENSRNOG00000047692	LOC100911660	56	92.014	ENSCCAG00000026761	HELLS	97	92.014	Cebus_capucinus
ENSRNOG00000047692	LOC100911660	100	87.097	ENSCATG00000033830	HELLS	100	93.137	Cercocebus_atys
ENSRNOG00000047692	LOC100911660	100	90.024	ENSCLAG00000003938	HELLS	100	90.389	Chinchilla_lanigera
ENSRNOG00000047692	LOC100911660	87	93.137	ENSCSAG00000006181	HELLS	100	93.137	Chlorocebus_sabaeus
ENSRNOG00000047692	LOC100911660	87	82.517	ENSCPBG00000025739	HELLS	99	84.047	Chrysemys_picta_bellii
ENSRNOG00000047692	LOC100911660	100	87.082	ENSCANG00000037736	HELLS	100	93.128	Colobus_angolensis_palliatus
ENSRNOG00000047692	LOC100911660	100	95.493	ENSCGRG00001017410	Hells	100	94.215	Cricetulus_griseus_chok1gshd
ENSRNOG00000047692	LOC100911660	95	65.385	ENSCSEG00000016985	hells	99	65.128	Cynoglossus_semilaevis
ENSRNOG00000047692	LOC100911660	64	62.286	ENSCVAG00000000159	hells	97	62.406	Cyprinodon_variegatus
ENSRNOG00000047692	LOC100911660	95	67.427	ENSDARG00000057738	hells	97	65.914	Danio_rerio
ENSRNOG00000047692	LOC100911660	77	93.049	ENSDNOG00000017758	HELLS	100	93.049	Dasypus_novemcinctus
ENSRNOG00000047692	LOC100911660	100	90.621	ENSDORG00000011812	Hells	100	90.442	Dipodomys_ordii
ENSRNOG00000047692	LOC100911660	75	52.041	ENSEBUG00000016152	hells	93	51.982	Eptatretus_burgeri
ENSRNOG00000047692	LOC100911660	100	91.606	ENSEASG00005011764	HELLS	100	91.289	Equus_asinus_asinus
ENSRNOG00000047692	LOC100911660	100	91.474	ENSECAG00000018810	HELLS	100	91.159	Equus_caballus
ENSRNOG00000047692	LOC100911660	81	93.478	ENSEEUG00000007680	HELLS	91	93.478	Erinaceus_europaeus
ENSRNOG00000047692	LOC100911660	96	64.943	ENSELUG00000014909	hells	93	64.612	Esox_lucius
ENSRNOG00000047692	LOC100911660	87	92.847	ENSFCAG00000005206	HELLS	100	92.847	Felis_catus
ENSRNOG00000047692	LOC100911660	99	81.364	ENSFALG00000007136	HELLS	99	81.364	Ficedula_albicollis
ENSRNOG00000047692	LOC100911660	100	88.929	ENSFDAG00000010042	HELLS	100	89.173	Fukomys_damarensis
ENSRNOG00000047692	LOC100911660	99	63.659	ENSFHEG00000022950	hells	98	62.589	Fundulus_heteroclitus
ENSRNOG00000047692	LOC100911660	100	78.372	ENSGALG00000005451	HELLS	100	82.951	Gallus_gallus
ENSRNOG00000047692	LOC100911660	98	64.084	ENSGAFG00000001204	hells	94	63.961	Gambusia_affinis
ENSRNOG00000047692	LOC100911660	99	62.036	ENSGACG00000003897	hells	91	64.668	Gasterosteus_aculeatus
ENSRNOG00000047692	LOC100911660	87	82.073	ENSGAGG00000010269	HELLS	100	83.070	Gopherus_agassizii
ENSRNOG00000047692	LOC100911660	100	87.835	ENSGGOG00000008103	HELLS	100	93.417	Gorilla_gorilla
ENSRNOG00000047692	LOC100911660	99	64.908	ENSHBUG00000010270	hells	99	63.424	Haplochromis_burtoni
ENSRNOG00000047692	LOC100911660	100	90.146	ENSHGLG00000011377	-	100	90.146	Heterocephalus_glaber_female
ENSRNOG00000047692	LOC100911660	73	89.264	ENSHGLG00000006537	-	100	89.264	Heterocephalus_glaber_female
ENSRNOG00000047692	LOC100911660	100	89.903	ENSHGLG00100017230	-	100	89.903	Heterocephalus_glaber_male
ENSRNOG00000047692	LOC100911660	90	80.702	ENSHGLG00100001957	-	94	80.769	Heterocephalus_glaber_male
ENSRNOG00000047692	LOC100911660	86	66.338	ENSHCOG00000001119	hells	96	66.243	Hippocampus_comes
ENSRNOG00000047692	LOC100911660	99	65.530	ENSIPUG00000002634	HELLS	97	64.439	Ictalurus_punctatus
ENSRNOG00000047692	LOC100911660	100	91.484	ENSSTOG00000021976	HELLS	100	91.849	Ictidomys_tridecemlineatus
ENSRNOG00000047692	LOC100911660	99	86.380	ENSJJAG00000000865	Hells	99	86.380	Jaculus_jaculus
ENSRNOG00000047692	LOC100911660	99	65.239	ENSKMAG00000017279	hells	98	64.447	Kryptolebias_marmoratus
ENSRNOG00000047692	LOC100911660	99	66.135	ENSLBEG00000027807	hells	98	64.769	Labrus_bergylta
ENSRNOG00000047692	LOC100911660	100	91.606	ENSLAFG00000007049	HELLS	100	91.606	Loxodonta_africana
ENSRNOG00000047692	LOC100911660	100	91.971	ENSMFAG00000044053	HELLS	99	92.939	Macaca_fascicularis
ENSRNOG00000047692	LOC100911660	100	84.447	ENSMMUG00000017255	HELLS	100	93.074	Macaca_mulatta
ENSRNOG00000047692	LOC100911660	100	87.097	ENSMNEG00000042628	HELLS	100	93.137	Macaca_nemestrina
ENSRNOG00000047692	LOC100911660	100	91.971	ENSMLEG00000041751	HELLS	99	92.939	Mandrillus_leucophaeus
ENSRNOG00000047692	LOC100911660	95	65.096	ENSMAMG00000009850	hells	98	67.344	Mastacembelus_armatus
ENSRNOG00000047692	LOC100911660	99	64.908	ENSMZEG00005018414	hells	99	63.424	Maylandia_zebra
ENSRNOG00000047692	LOC100911660	97	80.348	ENSMGAG00000006818	HELLS	97	82.727	Meleagris_gallopavo
ENSRNOG00000047692	LOC100911660	98	92.884	ENSMAUG00000021941	Hells	96	94.148	Mesocricetus_auratus
ENSRNOG00000047692	LOC100911660	70	90.767	ENSMICG00000046554	-	95	90.767	Microcebus_murinus
ENSRNOG00000047692	LOC100911660	100	93.301	ENSMOCG00000019342	Hells	100	93.301	Microtus_ochrogaster
ENSRNOG00000047692	LOC100911660	99	60.636	ENSMMOG00000007950	hells	97	60.710	Mola_mola
ENSRNOG00000047692	LOC100911660	97	84.230	ENSMODG00000005589	-	50	84.761	Monodelphis_domestica
ENSRNOG00000047692	LOC100911660	99	62.315	ENSMALG00000010244	hells	95	62.192	Monopterus_albus
ENSRNOG00000047692	LOC100911660	100	97.077	MGP_CAROLIEiJ_G0022930	Hells	100	97.077	Mus_caroli
ENSRNOG00000047692	LOC100911660	100	97.442	ENSMUSG00000025001	Hells	100	97.442	Mus_musculus
ENSRNOG00000047692	LOC100911660	100	97.929	MGP_PahariEiJ_G0014423	Hells	100	97.929	Mus_pahari
ENSRNOG00000047692	LOC100911660	100	97.686	MGP_SPRETEiJ_G0023848	Hells	100	97.686	Mus_spretus
ENSRNOG00000047692	LOC100911660	100	90.084	ENSMPUG00000017131	HELLS	100	90.084	Mustela_putorius_furo
ENSRNOG00000047692	LOC100911660	100	87.933	ENSMLUG00000030511	HELLS	100	87.933	Myotis_lucifugus
ENSRNOG00000047692	LOC100911660	100	92.579	ENSNGAG00000014049	Hells	100	92.124	Nannospalax_galili
ENSRNOG00000047692	LOC100911660	99	60.123	ENSNBRG00000024242	hells	99	60.123	Neolamprologus_brichardi
ENSRNOG00000047692	LOC100911660	100	87.313	ENSNLEG00000012987	HELLS	100	93.408	Nomascus_leucogenys
ENSRNOG00000047692	LOC100911660	100	86.861	ENSODEG00000015916	HELLS	100	86.754	Octodon_degus
ENSRNOG00000047692	LOC100911660	99	64.417	ENSONIG00000013166	hells	94	64.663	Oreochromis_niloticus
ENSRNOG00000047692	LOC100911660	100	84.326	ENSOANG00000005139	HELLS	100	84.262	Ornithorhynchus_anatinus
ENSRNOG00000047692	LOC100911660	100	90.865	ENSOCUG00000026731	HELLS	100	90.681	Oryctolagus_cuniculus
ENSRNOG00000047692	LOC100911660	99	64.756	ENSORLG00000000987	hells	98	63.604	Oryzias_latipes
ENSRNOG00000047692	LOC100911660	99	64.512	ENSORLG00020003952	hells	97	63.725	Oryzias_latipes_hni
ENSRNOG00000047692	LOC100911660	99	64.878	ENSORLG00015010960	hells	98	63.251	Oryzias_latipes_hsok
ENSRNOG00000047692	LOC100911660	99	64.146	ENSOMEG00000000135	hells	94	65.000	Oryzias_melastigma
ENSRNOG00000047692	LOC100911660	100	90.511	ENSOGAG00000017145	HELLS	99	90.511	Otolemur_garnettii
ENSRNOG00000047692	LOC100911660	100	90.743	ENSOARG00000004495	HELLS	100	90.442	Ovis_aries
ENSRNOG00000047692	LOC100911660	100	87.591	ENSPPAG00000001726	HELLS	100	93.137	Pan_paniscus
ENSRNOG00000047692	LOC100911660	87	92.707	ENSPPRG00000005839	HELLS	100	92.707	Panthera_pardus
ENSRNOG00000047692	LOC100911660	100	90.562	ENSPTIG00000007647	HELLS	100	92.707	Panthera_tigris_altaica
ENSRNOG00000047692	LOC100911660	100	87.591	ENSPTRG00000002778	HELLS	99	92.418	Pan_troglodytes
ENSRNOG00000047692	LOC100911660	100	87.097	ENSPANG00000033528	HELLS	100	93.137	Papio_anubis
ENSRNOG00000047692	LOC100911660	99	64.434	ENSPKIG00000010890	hells	99	63.062	Paramormyrops_kingsleyae
ENSRNOG00000047692	LOC100911660	96	81.566	ENSPSIG00000005462	HELLS	100	81.692	Pelodiscus_sinensis
ENSRNOG00000047692	LOC100911660	98	60.811	ENSPMGG00000014690	hells	98	66.667	Periophthalmus_magnuspinnatus
ENSRNOG00000047692	LOC100911660	100	87.698	ENSPEMG00000017579	Hells	100	87.698	Peromyscus_maniculatus_bairdii
ENSRNOG00000047692	LOC100911660	94	61.261	ENSPMAG00000004376	hells	98	60.197	Petromyzon_marinus
ENSRNOG00000047692	LOC100911660	100	83.948	ENSPCIG00000013361	HELLS	100	83.948	Phascolarctos_cinereus
ENSRNOG00000047692	LOC100911660	99	62.683	ENSPFOG00000001954	hells	95	63.293	Poecilia_formosa
ENSRNOG00000047692	LOC100911660	99	62.561	ENSPLAG00000006504	hells	97	64.124	Poecilia_latipinna
ENSRNOG00000047692	LOC100911660	99	62.683	ENSPMEG00000003024	hells	97	64.266	Poecilia_mexicana
ENSRNOG00000047692	LOC100911660	99	62.561	ENSPREG00000020337	hells	95	63.171	Poecilia_reticulata
ENSRNOG00000047692	LOC100911660	100	87.327	ENSPPYG00000002502	HELLS	100	86.991	Pongo_abelii
ENSRNOG00000047692	LOC100911660	100	84.775	ENSPCAG00000013618	HELLS	100	84.468	Procavia_capensis
ENSRNOG00000047692	LOC100911660	100	88.554	ENSPCOG00000023985	HELLS	99	92.929	Propithecus_coquereli
ENSRNOG00000047692	LOC100911660	92	92.818	ENSPVAG00000017899	HELLS	92	92.818	Pteropus_vampyrus
ENSRNOG00000047692	LOC100911660	99	62.392	ENSPNYG00000009100	hells	99	62.392	Pundamilia_nyererei
ENSRNOG00000047692	LOC100911660	96	64.475	ENSPNAG00000029968	hells	96	64.475	Pygocentrus_nattereri
ENSRNOG00000047692	LOC100911660	100	85.979	ENSRBIG00000041080	HELLS	100	92.052	Rhinopithecus_bieti
ENSRNOG00000047692	LOC100911660	100	87.179	ENSRROG00000040169	HELLS	100	92.717	Rhinopithecus_roxellana
ENSRNOG00000047692	LOC100911660	99	85.226	ENSSHAG00000014358	HELLS	99	85.226	Sarcophilus_harrisii
ENSRNOG00000047692	LOC100911660	96	67.629	ENSSFOG00015017895	hells	98	66.100	Scleropages_formosus
ENSRNOG00000047692	LOC100911660	98	65.640	ENSSMAG00000017423	hells	99	63.535	Scophthalmus_maximus
ENSRNOG00000047692	LOC100911660	99	65.890	ENSSDUG00000016924	hells	97	65.019	Seriola_dumerili
ENSRNOG00000047692	LOC100911660	99	63.759	ENSSLDG00000018960	hells	94	64.128	Seriola_lalandi_dorsalis
ENSRNOG00000047692	LOC100911660	100	79.101	ENSSPUG00000017425	HELLS	100	79.397	Sphenodon_punctatus
ENSRNOG00000047692	LOC100911660	96	66.286	ENSSPAG00000015579	hells	99	66.181	Stegastes_partitus
ENSRNOG00000047692	LOC100911660	100	91.230	ENSSSCG00000010486	HELLS	100	90.800	Sus_scrofa
ENSRNOG00000047692	LOC100911660	100	82.061	ENSTGUG00000007157	HELLS	99	82.061	Taeniopygia_guttata
ENSRNOG00000047692	LOC100911660	95	66.752	ENSTRUG00000000350	hells	97	64.868	Takifugu_rubripes
ENSRNOG00000047692	LOC100911660	99	56.189	ENSTNIG00000003738	hells	99	56.934	Tetraodon_nigroviridis
ENSRNOG00000047692	LOC100911660	100	90.876	ENSUAMG00000003343	HELLS	100	90.998	Ursus_americanus
ENSRNOG00000047692	LOC100911660	100	91.108	ENSUMAG00000004748	HELLS	99	92.285	Ursus_maritimus
ENSRNOG00000047692	LOC100911660	100	90.134	ENSVPAG00000010115	HELLS	100	89.845	Vicugna_pacos
ENSRNOG00000047692	LOC100911660	100	90.562	ENSVVUG00000022808	HELLS	100	90.562	Vulpes_vulpes
ENSRNOG00000047692	LOC100911660	99	62.086	ENSXCOG00000013840	hells	97	62.086	Xiphophorus_couchianus
ENSRNOG00000047692	LOC100911660	99	62.927	ENSXMAG00000005731	hells	97	65.303	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function