EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000047943 (Gene tree)
Gene ID: 108348106
Gene Symbol: Alkbh6
Alias: LOC292780|MGC112693
Full Name: alkB homolog 6
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 5334 bases
Position: chr1:90957133-90962466
Accession: 1566318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000064657	2OG-FeII_Oxy_2	PF13532.6	6.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000080613	-	1442	-	ENSRNOP00000072260	69 (aa)	-	Q4KM81
ENSRNOT00000071180	-	717	-	ENSRNOP00000064657	238 (aa)	XP_017443930	G3V9E2

Gene Model

Click here to download ENSRNOG00000047943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000047943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000047943	Alkbh6	100	100.000	ENSRNOG00000025216	LOC108348106	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000047943	Alkbh6	100	90.336	ENSG00000239382	ALKBH6	100	90.336	Homo_sapiens
ENSRNOG00000047943	Alkbh6	100	84.519	ENSAMEG00000000900	ALKBH6	100	82.845	Ailuropoda_melanoleuca
ENSRNOG00000047943	Alkbh6	93	58.824	ENSACIG00000006337	alkbh6	94	58.371	Amphilophus_citrinellus
ENSRNOG00000047943	Alkbh6	100	55.882	ENSAOCG00000023885	alkbh6	95	55.462	Amphiprion_ocellaris
ENSRNOG00000047943	Alkbh6	96	57.456	ENSAPEG00000003934	alkbh6	97	57.018	Amphiprion_percula
ENSRNOG00000047943	Alkbh6	95	56.000	ENSATEG00000008859	alkbh6	96	55.556	Anabas_testudineus
ENSRNOG00000047943	Alkbh6	100	89.076	ENSANAG00000034195	ALKBH6	89	89.076	Aotus_nancymaae
ENSRNOG00000047943	Alkbh6	96	58.772	ENSACLG00000001836	alkbh6	96	58.333	Astatotilapia_calliptera
ENSRNOG00000047943	Alkbh6	96	59.825	ENSAMXG00000033280	alkbh6	95	59.389	Astyanax_mexicanus
ENSRNOG00000047943	Alkbh6	100	90.336	ENSBTAG00000019678	ALKBH6	89	90.336	Bos_taurus
ENSRNOG00000047943	Alkbh6	95	38.496	WBGene00007202	B0564.2	94	38.053	Caenorhabditis_elegans
ENSRNOG00000047943	Alkbh6	100	89.916	ENSCJAG00000043322	ALKBH6	89	89.916	Callithrix_jacchus
ENSRNOG00000047943	Alkbh6	100	90.336	ENSCAFG00000006669	ALKBH6	89	90.336	Canis_familiaris
ENSRNOG00000047943	Alkbh6	100	81.513	ENSCAFG00020018151	ALKBH6	100	81.513	Canis_lupus_dingo
ENSRNOG00000047943	Alkbh6	100	89.916	ENSCHIG00000015494	ALKBH6	100	89.916	Capra_hircus
ENSRNOG00000047943	Alkbh6	89	84.038	ENSCAPG00000010410	ALKBH6	96	84.038	Cavia_aperea
ENSRNOG00000047943	Alkbh6	100	88.235	ENSCPOG00000035954	ALKBH6	100	88.235	Cavia_porcellus
ENSRNOG00000047943	Alkbh6	100	88.235	ENSCCAG00000028476	ALKBH6	89	88.235	Cebus_capucinus
ENSRNOG00000047943	Alkbh6	100	89.916	ENSCATG00000029769	ALKBH6	100	89.916	Cercocebus_atys
ENSRNOG00000047943	Alkbh6	100	87.395	ENSCLAG00000014273	ALKBH6	100	87.395	Chinchilla_lanigera
ENSRNOG00000047943	Alkbh6	100	89.496	ENSCSAG00000004282	ALKBH6	89	89.496	Chlorocebus_sabaeus
ENSRNOG00000047943	Alkbh6	100	61.134	ENSCPBG00000006841	ALKBH6	99	61.134	Chrysemys_picta_bellii
ENSRNOG00000047943	Alkbh6	58	52.518	ENSCING00000020875	-	91	52.518	Ciona_intestinalis
ENSRNOG00000047943	Alkbh6	72	45.556	ENSCSAVG00000006115	-	88	45.251	Ciona_savignyi
ENSRNOG00000047943	Alkbh6	100	80.672	ENSCANG00000029705	ALKBH6	89	80.672	Colobus_angolensis_palliatus
ENSRNOG00000047943	Alkbh6	100	94.958	ENSCGRG00001022841	Alkbh6	100	94.958	Cricetulus_griseus_chok1gshd
ENSRNOG00000047943	Alkbh6	100	52.941	ENSCSEG00000016413	alkbh6	99	52.033	Cynoglossus_semilaevis
ENSRNOG00000047943	Alkbh6	96	56.140	ENSCVAG00000004657	alkbh6	95	56.140	Cyprinodon_variegatus
ENSRNOG00000047943	Alkbh6	100	53.719	ENSDARG00000077253	alkbh6	97	54.043	Danio_rerio
ENSRNOG00000047943	Alkbh6	100	88.655	ENSDNOG00000033659	ALKBH6	100	88.655	Dasypus_novemcinctus
ENSRNOG00000047943	Alkbh6	93	47.768	FBgn0032259	CG6144	96	47.768	Drosophila_melanogaster
ENSRNOG00000047943	Alkbh6	63	90.066	ENSETEG00000004833	ALKBH6	85	91.781	Echinops_telfairi
ENSRNOG00000047943	Alkbh6	98	47.810	ENSEBUG00000002396	alkbh6	99	47.445	Eptatretus_burgeri
ENSRNOG00000047943	Alkbh6	100	89.916	ENSEASG00005001464	ALKBH6	98	89.916	Equus_asinus_asinus
ENSRNOG00000047943	Alkbh6	100	76.569	ENSEEUG00000002238	ALKBH6	92	76.569	Erinaceus_europaeus
ENSRNOG00000047943	Alkbh6	100	57.676	ENSELUG00000017352	alkbh6	99	56.846	Esox_lucius
ENSRNOG00000047943	Alkbh6	100	90.336	ENSFCAG00000006619	ALKBH6	98	90.336	Felis_catus
ENSRNOG00000047943	Alkbh6	100	86.134	ENSFDAG00000012270	ALKBH6	100	86.134	Fukomys_damarensis
ENSRNOG00000047943	Alkbh6	89	58.411	ENSGMOG00000020607	alkbh6	99	58.411	Gadus_morhua
ENSRNOG00000047943	Alkbh6	100	51.261	ENSGAFG00000010793	alkbh6	99	54.622	Gambusia_affinis
ENSRNOG00000047943	Alkbh6	89	57.277	ENSGACG00000002647	alkbh6	99	56.944	Gasterosteus_aculeatus
ENSRNOG00000047943	Alkbh6	74	59.669	ENSGAGG00000006766	ALKBH6	81	59.669	Gopherus_agassizii
ENSRNOG00000047943	Alkbh6	100	89.916	ENSGGOG00000037040	ALKBH6	100	89.916	Gorilla_gorilla
ENSRNOG00000047943	Alkbh6	96	58.333	ENSHBUG00000023541	alkbh6	97	57.895	Haplochromis_burtoni
ENSRNOG00000047943	Alkbh6	100	87.815	ENSHGLG00000008091	ALKBH6	100	87.815	Heterocephalus_glaber_female
ENSRNOG00000047943	Alkbh6	100	87.815	ENSHGLG00100012062	ALKBH6	100	87.815	Heterocephalus_glaber_male
ENSRNOG00000047943	Alkbh6	98	58.298	ENSHCOG00000000308	alkbh6	97	58.298	Hippocampus_comes
ENSRNOG00000047943	Alkbh6	100	55.649	ENSIPUG00000018672	alkbh6	99	55.042	Ictalurus_punctatus
ENSRNOG00000047943	Alkbh6	100	91.176	ENSSTOG00000009337	ALKBH6	100	91.176	Ictidomys_tridecemlineatus
ENSRNOG00000047943	Alkbh6	99	90.295	ENSJJAG00000019843	Alkbh6	99	90.295	Jaculus_jaculus
ENSRNOG00000047943	Alkbh6	97	55.172	ENSKMAG00000003959	alkbh6	99	54.741	Kryptolebias_marmoratus
ENSRNOG00000047943	Alkbh6	96	58.190	ENSLBEG00000028172	alkbh6	96	57.826	Labrus_bergylta
ENSRNOG00000047943	Alkbh6	100	53.878	ENSLACG00000002470	alkbh6	99	53.469	Latimeria_chalumnae
ENSRNOG00000047943	Alkbh6	99	58.436	ENSLOCG00000014771	alkbh6	99	57.917	Lepisosteus_oculatus
ENSRNOG00000047943	Alkbh6	100	90.336	ENSMFAG00000042361	ALKBH6	100	90.336	Macaca_fascicularis
ENSRNOG00000047943	Alkbh6	100	90.336	ENSMMUG00000019700	ALKBH6	100	90.336	Macaca_mulatta
ENSRNOG00000047943	Alkbh6	100	90.336	ENSMNEG00000032917	ALKBH6	100	90.336	Macaca_nemestrina
ENSRNOG00000047943	Alkbh6	96	57.456	ENSMAMG00000010698	alkbh6	96	57.018	Mastacembelus_armatus
ENSRNOG00000047943	Alkbh6	96	58.772	ENSMZEG00005014192	alkbh6	96	58.333	Maylandia_zebra
ENSRNOG00000047943	Alkbh6	100	95.378	ENSMAUG00000013258	Alkbh6	100	95.378	Mesocricetus_auratus
ENSRNOG00000047943	Alkbh6	100	90.336	ENSMICG00000033414	ALKBH6	100	90.336	Microcebus_murinus
ENSRNOG00000047943	Alkbh6	100	95.378	ENSMOCG00000008724	Alkbh6	100	95.378	Microtus_ochrogaster
ENSRNOG00000047943	Alkbh6	100	51.429	ENSMMOG00000019353	alkbh6	99	50.820	Mola_mola
ENSRNOG00000047943	Alkbh6	100	55.462	ENSMALG00000003655	-	99	55.042	Monopterus_albus
ENSRNOG00000047943	Alkbh6	100	55.042	ENSMALG00000013511	alkbh6	99	54.622	Monopterus_albus
ENSRNOG00000047943	Alkbh6	100	96.218	MGP_CAROLIEiJ_G0029512	Alkbh6	100	96.218	Mus_caroli
ENSRNOG00000047943	Alkbh6	100	96.639	ENSMUSG00000042831	Alkbh6	100	96.639	Mus_musculus
ENSRNOG00000047943	Alkbh6	100	96.218	MGP_PahariEiJ_G0012746	Alkbh6	100	96.218	Mus_pahari
ENSRNOG00000047943	Alkbh6	100	96.639	MGP_SPRETEiJ_G0030608	Alkbh6	100	96.639	Mus_spretus
ENSRNOG00000047943	Alkbh6	100	89.076	ENSMPUG00000005804	ALKBH6	80	89.076	Mustela_putorius_furo
ENSRNOG00000047943	Alkbh6	99	81.013	ENSMLUG00000030420	ALKBH6	99	78.903	Myotis_lucifugus
ENSRNOG00000047943	Alkbh6	100	92.857	ENSNGAG00000012659	Alkbh6	94	92.857	Nannospalax_galili
ENSRNOG00000047943	Alkbh6	96	59.211	ENSNBRG00000018188	alkbh6	96	58.772	Neolamprologus_brichardi
ENSRNOG00000047943	Alkbh6	100	89.916	ENSNLEG00000011624	ALKBH6	100	89.916	Nomascus_leucogenys
ENSRNOG00000047943	Alkbh6	83	74.619	ENSMEUG00000007262	ALKBH6	99	73.604	Notamacropus_eugenii
ENSRNOG00000047943	Alkbh6	100	87.395	ENSODEG00000015515	ALKBH6	100	87.395	Octodon_degus
ENSRNOG00000047943	Alkbh6	100	57.143	ENSONIG00000021156	alkbh6	99	56.723	Oreochromis_niloticus
ENSRNOG00000047943	Alkbh6	100	91.176	ENSOCUG00000017671	ALKBH6	100	91.176	Oryctolagus_cuniculus
ENSRNOG00000047943	Alkbh6	92	58.636	ENSORLG00000015103	alkbh6	92	58.182	Oryzias_latipes
ENSRNOG00000047943	Alkbh6	100	56.723	ENSORLG00020004747	alkbh6	90	56.303	Oryzias_latipes_hni
ENSRNOG00000047943	Alkbh6	55	66.412	ENSORLG00015006159	alkbh6	91	66.412	Oryzias_latipes_hsok
ENSRNOG00000047943	Alkbh6	100	55.042	ENSOMEG00000022075	alkbh6	99	54.622	Oryzias_melastigma
ENSRNOG00000047943	Alkbh6	100	90.336	ENSOGAG00000011490	ALKBH6	89	90.336	Otolemur_garnettii
ENSRNOG00000047943	Alkbh6	82	90.206	ENSOARG00000005191	ALKBH6	69	90.206	Ovis_aries
ENSRNOG00000047943	Alkbh6	100	89.916	ENSPPAG00000036802	ALKBH6	100	89.916	Pan_paniscus
ENSRNOG00000047943	Alkbh6	100	90.756	ENSPPRG00000011495	ALKBH6	89	90.756	Panthera_pardus
ENSRNOG00000047943	Alkbh6	100	89.916	ENSPTRG00000039251	ALKBH6	100	89.916	Pan_troglodytes
ENSRNOG00000047943	Alkbh6	100	89.916	ENSPANG00000012372	ALKBH6	89	89.916	Papio_anubis
ENSRNOG00000047943	Alkbh6	100	57.741	ENSPKIG00000015358	alkbh6	100	57.143	Paramormyrops_kingsleyae
ENSRNOG00000047943	Alkbh6	96	65.948	ENSPSIG00000012465	ALKBH6	82	65.086	Pelodiscus_sinensis
ENSRNOG00000047943	Alkbh6	97	53.478	ENSPMGG00000012259	alkbh6	96	53.478	Periophthalmus_magnuspinnatus
ENSRNOG00000047943	Alkbh6	100	96.218	ENSPEMG00000001920	Alkbh6	100	96.218	Peromyscus_maniculatus_bairdii
ENSRNOG00000047943	Alkbh6	92	56.780	ENSPMAG00000005422	alkbh6	92	55.508	Petromyzon_marinus
ENSRNOG00000047943	Alkbh6	100	55.649	ENSPFOG00000019931	alkbh6	85	54.622	Poecilia_formosa
ENSRNOG00000047943	Alkbh6	100	55.042	ENSPLAG00000001926	alkbh6	85	54.622	Poecilia_latipinna
ENSRNOG00000047943	Alkbh6	88	58.571	ENSPMEG00000022559	alkbh6	92	58.095	Poecilia_mexicana
ENSRNOG00000047943	Alkbh6	95	55.066	ENSPREG00000001145	alkbh6	95	58.590	Poecilia_reticulata
ENSRNOG00000047943	Alkbh6	100	90.756	ENSPPYG00000029809	ALKBH6	88	90.756	Pongo_abelii
ENSRNOG00000047943	Alkbh6	100	89.916	ENSPCAG00000018829	ALKBH6	89	89.916	Procavia_capensis
ENSRNOG00000047943	Alkbh6	100	89.916	ENSPCOG00000024098	ALKBH6	89	89.916	Propithecus_coquereli
ENSRNOG00000047943	Alkbh6	83	90.355	ENSPVAG00000024193	ALKBH6	74	90.355	Pteropus_vampyrus
ENSRNOG00000047943	Alkbh6	96	59.211	ENSPNYG00000011487	alkbh6	96	58.772	Pundamilia_nyererei
ENSRNOG00000047943	Alkbh6	99	57.627	ENSPNAG00000024220	alkbh6	99	57.627	Pygocentrus_nattereri
ENSRNOG00000047943	Alkbh6	100	90.756	ENSRBIG00000010440	ALKBH6	100	90.756	Rhinopithecus_bieti
ENSRNOG00000047943	Alkbh6	100	89.496	ENSSBOG00000027983	ALKBH6	89	89.496	Saimiri_boliviensis_boliviensis
ENSRNOG00000047943	Alkbh6	100	73.950	ENSSHAG00000010575	ALKBH6	98	73.950	Sarcophilus_harrisii
ENSRNOG00000047943	Alkbh6	96	60.262	ENSSFOG00015005576	alkbh6	99	60.909	Scleropages_formosus
ENSRNOG00000047943	Alkbh6	94	57.589	ENSSMAG00000016306	alkbh6	93	56.696	Scophthalmus_maximus
ENSRNOG00000047943	Alkbh6	95	56.889	ENSSDUG00000007406	alkbh6	96	56.444	Seriola_dumerili
ENSRNOG00000047943	Alkbh6	95	57.333	ENSSLDG00000015256	alkbh6	96	56.889	Seriola_lalandi_dorsalis
ENSRNOG00000047943	Alkbh6	100	55.042	ENSSLDG00000009873	-	99	54.622	Seriola_lalandi_dorsalis
ENSRNOG00000047943	Alkbh6	100	59.917	ENSSPUG00000011895	ALKBH6	97	59.504	Sphenodon_punctatus
ENSRNOG00000047943	Alkbh6	98	58.228	ENSSPAG00000000608	alkbh6	99	57.627	Stegastes_partitus
ENSRNOG00000047943	Alkbh6	100	90.336	ENSSSCG00000002910	ALKBH6	100	90.336	Sus_scrofa
ENSRNOG00000047943	Alkbh6	100	55.230	ENSTNIG00000002453	alkbh6	99	54.772	Tetraodon_nigroviridis
ENSRNOG00000047943	Alkbh6	100	90.336	ENSTTRG00000021443	ALKBH6	89	90.336	Tursiops_truncatus
ENSRNOG00000047943	Alkbh6	100	90.336	ENSUAMG00000020580	ALKBH6	91	90.336	Ursus_americanus
ENSRNOG00000047943	Alkbh6	100	89.916	ENSVVUG00000013636	ALKBH6	100	89.916	Vulpes_vulpes
ENSRNOG00000047943	Alkbh6	96	61.373	ENSXETG00000002842	alkbh6	96	61.039	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process