EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000047960 (Gene tree)
Gene ID: 367915
Gene Symbol: Rab9b
Alias: LOC367915|RGD1562951
Full Name: RAB9B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 11107 bases
Position: chrX:107531404-107542510
Accession: 1562951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066233	MMR_HSR1	PF01926.23	5.5e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074140	-	3846	-	ENSRNOP00000066233	201 (aa)	-	D3ZP15

Gene Model

Click here to download ENSRNOG00000047960's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05162	Measles	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000047960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000047960	Rab9b	97	34.872	ENSRNOG00000042189	Rab31	97	34.872
ENSRNOG00000047960	Rab9b	60	31.148	ENSRNOG00000020770	Arl4d	59	31.148
ENSRNOG00000047960	Rab9b	84	41.420	ENSRNOG00000018901	Rab14	76	41.420
ENSRNOG00000047960	Rab9b	74	36.000	ENSRNOG00000019295	Rab12	60	36.000
ENSRNOG00000047960	Rab9b	79	39.623	ENSRNOG00000050510	LOC102555167	77	39.623
ENSRNOG00000047960	Rab9b	98	36.538	ENSRNOG00000023640	Rab25	94	36.538
ENSRNOG00000047960	Rab9b	76	32.680	ENSRNOG00000016611	Hras	84	34.146
ENSRNOG00000047960	Rab9b	99	53.695	ENSRNOG00000012247	Rab7a	98	55.978
ENSRNOG00000047960	Rab9b	97	35.354	ENSRNOG00000018568	Rab5c	89	35.354
ENSRNOG00000047960	Rab9b	75	37.255	ENSRNOG00000006698	Rab33a	63	37.255
ENSRNOG00000047960	Rab9b	76	34.194	ENSRNOG00000014060	Mras	77	36.145
ENSRNOG00000047960	Rab9b	96	30.841	ENSRNOG00000023375	Rab34	80	30.841
ENSRNOG00000047960	Rab9b	83	41.071	ENSRNOG00000016733	Rab13	80	41.071
ENSRNOG00000047960	Rab9b	82	39.759	ENSRNOG00000010224	Rab30	79	39.759
ENSRNOG00000047960	Rab9b	67	30.769	ENSRNOG00000008565	Nkiras1	70	30.769
ENSRNOG00000047960	Rab9b	84	37.870	ENSRNOG00000012488	Rab2b	76	37.870
ENSRNOG00000047960	Rab9b	84	33.721	ENSRNOG00000018176	Rab6a	79	33.721
ENSRNOG00000047960	Rab9b	76	31.373	ENSRNOG00000023079	Nras	84	32.927
ENSRNOG00000047960	Rab9b	86	41.040	ENSRNOG00000011302	Rab11a	78	41.040
ENSRNOG00000047960	Rab9b	97	32.000	ENSRNOG00000009198	Rab6b	93	32.000
ENSRNOG00000047960	Rab9b	99	30.392	ENSRNOG00000013035	Rab33b	87	30.542
ENSRNOG00000047960	Rab9b	88	35.326	ENSRNOG00000012629	Rab23	75	35.326
ENSRNOG00000047960	Rab9b	86	41.040	ENSRNOG00000007648	Rab11b	77	41.040
ENSRNOG00000047960	Rab9b	84	37.278	ENSRNOG00000007364	Rab15	77	37.278
ENSRNOG00000047960	Rab9b	83	39.759	ENSRNOG00000018972	Rab18	79	39.759
ENSRNOG00000047960	Rab9b	79	39.623	ENSRNOG00000004992	Rab1a	76	39.623
ENSRNOG00000047960	Rab9b	82	38.554	ENSRNOG00000005963	Rab2a	78	37.952
ENSRNOG00000047960	Rab9b	50	42.000	ENSRNOG00000001311	Rab36	65	35.955
ENSRNOG00000047960	Rab9b	81	31.515	ENSRNOG00000003988	Dnajc27	60	31.515
ENSRNOG00000047960	Rab9b	100	75.622	ENSRNOG00000030443	Rab9a	100	75.622
ENSRNOG00000047960	Rab9b	76	33.333	ENSRNOG00000009338	Kras	88	33.918
ENSRNOG00000047960	Rab9b	97	35.000	ENSRNOG00000022014	Rab35	97	35.468
ENSRNOG00000047960	Rab9b	97	34.826	ENSRNOG00000006130	Rab5b	90	34.826
ENSRNOG00000047960	Rab9b	88	33.702	ENSRNOG00000013947	Rabl2	67	33.702
ENSRNOG00000047960	Rab9b	97	32.308	ENSRNOG00000005762	Rab22a	97	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000047960	Rab9b	100	98.507	ENSG00000123570	RAB9B	100	98.507	Homo_sapiens
ENSRNOG00000047960	Rab9b	100	77.228	ENSAPOG00000007269	rab9b	89	77.228	Acanthochromis_polyacanthus
ENSRNOG00000047960	Rab9b	100	99.005	ENSAMEG00000018531	RAB9B	100	99.005	Ailuropoda_melanoleuca
ENSRNOG00000047960	Rab9b	100	78.218	ENSACIG00000007739	rab9b	99	78.218	Amphilophus_citrinellus
ENSRNOG00000047960	Rab9b	100	77.228	ENSAOCG00000022810	rab9b	100	77.228	Amphiprion_ocellaris
ENSRNOG00000047960	Rab9b	100	77.228	ENSAPEG00000014149	rab9b	100	77.228	Amphiprion_percula
ENSRNOG00000047960	Rab9b	100	78.713	ENSATEG00000004488	rab9b	96	78.713	Anabas_testudineus
ENSRNOG00000047960	Rab9b	100	94.030	ENSAPLG00000001949	RAB9B	100	94.030	Anas_platyrhynchos
ENSRNOG00000047960	Rab9b	100	87.065	ENSACAG00000014318	RAB9B	100	87.065	Anolis_carolinensis
ENSRNOG00000047960	Rab9b	100	99.005	ENSANAG00000031345	RAB9B	100	99.005	Aotus_nancymaae
ENSRNOG00000047960	Rab9b	100	77.723	ENSACLG00000004795	rab9b	91	77.723	Astatotilapia_calliptera
ENSRNOG00000047960	Rab9b	100	80.198	ENSAMXG00000026476	rab9b	90	80.198	Astyanax_mexicanus
ENSRNOG00000047960	Rab9b	100	98.507	ENSBTAG00000019820	RAB9B	100	98.507	Bos_taurus
ENSRNOG00000047960	Rab9b	100	99.005	ENSCJAG00000003347	RAB9B	100	99.005	Callithrix_jacchus
ENSRNOG00000047960	Rab9b	100	99.005	ENSCAFG00000017812	RAB9B	100	99.005	Canis_familiaris
ENSRNOG00000047960	Rab9b	100	98.507	ENSCHIG00000002776	RAB9B	100	98.507	Capra_hircus
ENSRNOG00000047960	Rab9b	100	99.005	ENSTSYG00000008912	RAB9B	100	99.005	Carlito_syrichta
ENSRNOG00000047960	Rab9b	100	98.507	ENSCCAG00000017812	RAB9B	100	98.507	Cebus_capucinus
ENSRNOG00000047960	Rab9b	100	99.005	ENSCSAG00000000315	RAB9B	100	99.005	Chlorocebus_sabaeus
ENSRNOG00000047960	Rab9b	100	98.010	ENSCHOG00000012678	RAB9B	100	98.010	Choloepus_hoffmanni
ENSRNOG00000047960	Rab9b	100	94.030	ENSCPBG00000001542	RAB9B	100	94.030	Chrysemys_picta_bellii
ENSRNOG00000047960	Rab9b	100	99.005	ENSCANG00000012854	RAB9B	100	99.005	Colobus_angolensis_palliatus
ENSRNOG00000047960	Rab9b	100	99.502	ENSCGRG00001001220	Rab9b	100	99.502	Cricetulus_griseus_chok1gshd
ENSRNOG00000047960	Rab9b	100	98.507	ENSCGRG00000002809	Rab9b	100	98.507	Cricetulus_griseus_crigri
ENSRNOG00000047960	Rab9b	100	79.208	ENSCSEG00000014467	rab9b	92	79.208	Cynoglossus_semilaevis
ENSRNOG00000047960	Rab9b	100	76.733	ENSCVAG00000021826	rab9b	100	76.733	Cyprinodon_variegatus
ENSRNOG00000047960	Rab9b	100	77.723	ENSDARG00000103391	rab9b	100	77.723	Danio_rerio
ENSRNOG00000047960	Rab9b	100	98.507	ENSDNOG00000032358	RAB9B	100	98.507	Dasypus_novemcinctus
ENSRNOG00000047960	Rab9b	100	99.005	ENSETEG00000018698	RAB9B	100	99.005	Echinops_telfairi
ENSRNOG00000047960	Rab9b	100	61.836	ENSEBUG00000004967	rab9b	100	61.836	Eptatretus_burgeri
ENSRNOG00000047960	Rab9b	100	99.005	ENSEASG00005002563	RAB9B	100	99.005	Equus_asinus_asinus
ENSRNOG00000047960	Rab9b	100	99.005	ENSECAG00000022069	RAB9B	100	99.005	Equus_caballus
ENSRNOG00000047960	Rab9b	100	99.502	ENSEEUG00000005264	RAB9B	100	99.502	Erinaceus_europaeus
ENSRNOG00000047960	Rab9b	100	76.355	ENSELUG00000004378	rab9b	100	76.355	Esox_lucius
ENSRNOG00000047960	Rab9b	100	98.507	ENSFCAG00000000424	RAB9B	100	98.507	Felis_catus
ENSRNOG00000047960	Rab9b	100	95.522	ENSFALG00000015153	RAB9B	100	95.522	Ficedula_albicollis
ENSRNOG00000047960	Rab9b	100	99.502	ENSFDAG00000014776	RAB9B	100	99.502	Fukomys_damarensis
ENSRNOG00000047960	Rab9b	100	76.238	ENSFHEG00000009417	rab9b	92	76.238	Fundulus_heteroclitus
ENSRNOG00000047960	Rab9b	100	79.803	ENSGMOG00000020194	rab9b	99	79.803	Gadus_morhua
ENSRNOG00000047960	Rab9b	100	94.030	ENSGALG00000004918	RAB9B	100	94.030	Gallus_gallus
ENSRNOG00000047960	Rab9b	100	76.238	ENSGAFG00000004099	rab9b	90	76.238	Gambusia_affinis
ENSRNOG00000047960	Rab9b	100	77.723	ENSGACG00000018291	rab9b	99	77.723	Gasterosteus_aculeatus
ENSRNOG00000047960	Rab9b	100	93.035	ENSGAGG00000012314	RAB9B	100	93.035	Gopherus_agassizii
ENSRNOG00000047960	Rab9b	100	99.005	ENSGGOG00000009507	RAB9B	100	99.005	Gorilla_gorilla
ENSRNOG00000047960	Rab9b	100	77.723	ENSHBUG00000001595	rab9b	91	77.723	Haplochromis_burtoni
ENSRNOG00000047960	Rab9b	100	97.512	ENSHGLG00000000448	RAB9B	100	97.512	Heterocephalus_glaber_female
ENSRNOG00000047960	Rab9b	100	97.512	ENSHGLG00100003190	RAB9B	100	97.512	Heterocephalus_glaber_male
ENSRNOG00000047960	Rab9b	100	79.104	ENSHCOG00000005024	rab9b	99	79.104	Hippocampus_comes
ENSRNOG00000047960	Rab9b	100	70.792	ENSIPUG00000016561	rab9b	91	70.792	Ictalurus_punctatus
ENSRNOG00000047960	Rab9b	100	99.005	ENSSTOG00000004081	RAB9B	100	99.005	Ictidomys_tridecemlineatus
ENSRNOG00000047960	Rab9b	100	76.733	ENSKMAG00000019964	rab9b	100	76.733	Kryptolebias_marmoratus
ENSRNOG00000047960	Rab9b	99	78.000	ENSLBEG00000011478	rab9b	92	78.000	Labrus_bergylta
ENSRNOG00000047960	Rab9b	89	90.449	ENSLACG00000017891	RAB9B	84	90.449	Latimeria_chalumnae
ENSRNOG00000047960	Rab9b	100	99.005	ENSLAFG00000000166	RAB9B	100	99.005	Loxodonta_africana
ENSRNOG00000047960	Rab9b	100	99.005	ENSMFAG00000010320	RAB9B	100	99.005	Macaca_fascicularis
ENSRNOG00000047960	Rab9b	100	99.005	ENSMMUG00000021198	RAB9B	100	99.005	Macaca_mulatta
ENSRNOG00000047960	Rab9b	100	99.005	ENSMLEG00000027985	RAB9B	100	99.005	Mandrillus_leucophaeus
ENSRNOG00000047960	Rab9b	100	78.049	ENSMAMG00000009927	rab9b	100	78.049	Mastacembelus_armatus
ENSRNOG00000047960	Rab9b	100	77.723	ENSMZEG00005010392	rab9b	91	77.723	Maylandia_zebra
ENSRNOG00000047960	Rab9b	100	100.000	ENSMAUG00000010219	Rab9b	100	100.000	Mesocricetus_auratus
ENSRNOG00000047960	Rab9b	100	98.507	ENSMICG00000003057	RAB9B	100	98.507	Microcebus_murinus
ENSRNOG00000047960	Rab9b	100	98.010	ENSMOCG00000010381	Rab9b	100	98.010	Microtus_ochrogaster
ENSRNOG00000047960	Rab9b	99	78.109	ENSMMOG00000008669	rab9b	91	78.109	Mola_mola
ENSRNOG00000047960	Rab9b	100	94.527	ENSMODG00000011531	RAB9B	100	94.527	Monodelphis_domestica
ENSRNOG00000047960	Rab9b	100	78.218	ENSMALG00000007664	rab9b	94	78.218	Monopterus_albus
ENSRNOG00000047960	Rab9b	100	99.502	MGP_CAROLIEiJ_G0033427	Rab9b	100	99.502	Mus_caroli
ENSRNOG00000047960	Rab9b	100	99.502	ENSMUSG00000043463	Rab9b	100	99.502	Mus_musculus
ENSRNOG00000047960	Rab9b	100	99.502	MGP_PahariEiJ_G0031967	Rab9b	100	99.502	Mus_pahari
ENSRNOG00000047960	Rab9b	100	99.502	MGP_SPRETEiJ_G0034594	Rab9b	100	99.502	Mus_spretus
ENSRNOG00000047960	Rab9b	100	99.005	ENSMPUG00000019218	RAB9B	100	99.005	Mustela_putorius_furo
ENSRNOG00000047960	Rab9b	100	98.507	ENSMLUG00000028856	RAB9B	100	98.507	Myotis_lucifugus
ENSRNOG00000047960	Rab9b	100	98.507	ENSNGAG00000011436	Rab9b	100	98.507	Nannospalax_galili
ENSRNOG00000047960	Rab9b	100	77.723	ENSNBRG00000013940	rab9b	91	77.723	Neolamprologus_brichardi
ENSRNOG00000047960	Rab9b	100	99.005	ENSNLEG00000018324	RAB9B	100	99.005	Nomascus_leucogenys
ENSRNOG00000047960	Rab9b	100	94.030	ENSMEUG00000000993	RAB9B	100	94.030	Notamacropus_eugenii
ENSRNOG00000047960	Rab9b	100	99.005	ENSOPRG00000015421	RAB9B	100	99.005	Ochotona_princeps
ENSRNOG00000047960	Rab9b	100	77.723	ENSONIG00000020581	rab9b	100	77.723	Oreochromis_niloticus
ENSRNOG00000047960	Rab9b	100	94.527	ENSOANG00000004230	RAB9B	100	94.527	Ornithorhynchus_anatinus
ENSRNOG00000047960	Rab9b	100	99.005	ENSOCUG00000014809	RAB9B	100	99.005	Oryctolagus_cuniculus
ENSRNOG00000047960	Rab9b	100	76.238	ENSORLG00000006405	rab9b	96	76.238	Oryzias_latipes
ENSRNOG00000047960	Rab9b	100	77.228	ENSORLG00020009158	rab9b	96	77.228	Oryzias_latipes_hni
ENSRNOG00000047960	Rab9b	100	76.238	ENSORLG00015004265	rab9b	97	76.238	Oryzias_latipes_hsok
ENSRNOG00000047960	Rab9b	100	77.723	ENSOMEG00000008327	rab9b	93	77.723	Oryzias_melastigma
ENSRNOG00000047960	Rab9b	100	99.502	ENSOGAG00000015082	RAB9B	100	99.502	Otolemur_garnettii
ENSRNOG00000047960	Rab9b	100	98.507	ENSOARG00000009986	RAB9B	100	98.507	Ovis_aries
ENSRNOG00000047960	Rab9b	100	98.507	ENSPPAG00000002892	RAB9B	100	98.507	Pan_paniscus
ENSRNOG00000047960	Rab9b	100	98.507	ENSPPRG00000011181	RAB9B	100	98.507	Panthera_pardus
ENSRNOG00000047960	Rab9b	100	98.507	ENSPTIG00000009359	RAB9B	100	98.507	Panthera_tigris_altaica
ENSRNOG00000047960	Rab9b	100	98.507	ENSPTRG00000028227	RAB9B	100	98.507	Pan_troglodytes
ENSRNOG00000047960	Rab9b	100	99.005	ENSPANG00000018955	RAB9B	100	99.005	Papio_anubis
ENSRNOG00000047960	Rab9b	100	79.310	ENSPKIG00000014623	rab9b	92	79.310	Paramormyrops_kingsleyae
ENSRNOG00000047960	Rab9b	100	94.030	ENSPSIG00000001871	RAB9B	100	94.030	Pelodiscus_sinensis
ENSRNOG00000047960	Rab9b	100	77.723	ENSPMGG00000002496	rab9b	100	77.723	Periophthalmus_magnuspinnatus
ENSRNOG00000047960	Rab9b	100	94.527	ENSPCIG00000020415	RAB9B	100	94.527	Phascolarctos_cinereus
ENSRNOG00000047960	Rab9b	100	76.238	ENSPFOG00000020060	rab9b	100	76.238	Poecilia_formosa
ENSRNOG00000047960	Rab9b	100	76.238	ENSPLAG00000011866	rab9b	91	76.238	Poecilia_latipinna
ENSRNOG00000047960	Rab9b	100	76.238	ENSPMEG00000024399	rab9b	91	76.238	Poecilia_mexicana
ENSRNOG00000047960	Rab9b	100	76.238	ENSPMEG00000013734	rab9b	91	76.238	Poecilia_mexicana
ENSRNOG00000047960	Rab9b	100	75.743	ENSPREG00000006970	rab9b	92	75.743	Poecilia_reticulata
ENSRNOG00000047960	Rab9b	100	99.005	ENSPPYG00000020591	RAB9B	100	99.005	Pongo_abelii
ENSRNOG00000047960	Rab9b	100	75.622	ENSPCAG00000013418	RAB9B	100	75.622	Procavia_capensis
ENSRNOG00000047960	Rab9b	100	99.005	ENSPCOG00000002853	RAB9B	100	99.005	Propithecus_coquereli
ENSRNOG00000047960	Rab9b	55	100.000	ENSPVAG00000008773	RAB9B	100	100.000	Pteropus_vampyrus
ENSRNOG00000047960	Rab9b	100	77.723	ENSPNYG00000000233	rab9b	91	77.723	Pundamilia_nyererei
ENSRNOG00000047960	Rab9b	100	79.703	ENSPNAG00000018132	rab9b	90	79.703	Pygocentrus_nattereri
ENSRNOG00000047960	Rab9b	100	99.005	ENSRROG00000025642	RAB9B	100	99.005	Rhinopithecus_roxellana
ENSRNOG00000047960	Rab9b	100	94.030	ENSSHAG00000012788	RAB9B	100	94.030	Sarcophilus_harrisii
ENSRNOG00000047960	Rab9b	100	79.803	ENSSFOG00015010492	rab9b	100	79.803	Scleropages_formosus
ENSRNOG00000047960	Rab9b	100	78.218	ENSSMAG00000006709	rab9b	98	78.218	Scophthalmus_maximus
ENSRNOG00000047960	Rab9b	100	79.208	ENSSDUG00000007575	rab9b	99	79.208	Seriola_dumerili
ENSRNOG00000047960	Rab9b	100	79.208	ENSSLDG00000009351	rab9b	99	79.208	Seriola_lalandi_dorsalis
ENSRNOG00000047960	Rab9b	100	98.010	ENSSARG00000006891	RAB9B	100	98.010	Sorex_araneus
ENSRNOG00000047960	Rab9b	100	94.527	ENSSPUG00000017531	RAB9B	100	94.527	Sphenodon_punctatus
ENSRNOG00000047960	Rab9b	100	76.733	ENSSPAG00000009806	rab9b	92	76.733	Stegastes_partitus
ENSRNOG00000047960	Rab9b	100	98.507	ENSSSCG00000032672	RAB9B	100	98.507	Sus_scrofa
ENSRNOG00000047960	Rab9b	100	95.522	ENSTGUG00000006516	RAB9B	100	95.522	Taeniopygia_guttata
ENSRNOG00000047960	Rab9b	100	99.005	ENSTBEG00000006468	RAB9B	100	99.005	Tupaia_belangeri
ENSRNOG00000047960	Rab9b	100	99.005	ENSTTRG00000003956	RAB9B	100	99.005	Tursiops_truncatus
ENSRNOG00000047960	Rab9b	100	99.005	ENSUAMG00000018451	RAB9B	100	99.005	Ursus_americanus
ENSRNOG00000047960	Rab9b	100	99.005	ENSUMAG00000001213	RAB9B	100	99.005	Ursus_maritimus
ENSRNOG00000047960	Rab9b	100	99.005	ENSVVUG00000001381	RAB9B	100	99.005	Vulpes_vulpes
ENSRNOG00000047960	Rab9b	100	84.080	ENSXETG00000018133	rab9b	100	84.080	Xenopus_tropicalis
ENSRNOG00000047960	Rab9b	100	76.238	ENSXCOG00000009094	rab9b	100	76.238	Xiphophorus_couchianus
ENSRNOG00000047960	Rab9b	98	77.273	ENSXMAG00000019499	rab9b	96	77.273	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005829	cytosol	-	IEA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0019003	GDP binding	-	IEA	Function
GO:0019003	GDP binding	-	ISO	Function
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0042147	retrograde transport, endosome to Golgi	21873635.	IBA	Process
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0045335	phagocytic vesicle	-	IEA	Component
GO:0045335	phagocytic vesicle	-	ISO	Component