EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000048193 (Gene tree)
Gene ID: 100910795
Gene Symbol: Hnrnph3
Alias: Hnrph3|LOC361838
Full Name: heterogeneous nuclear ribonucleoprotein H3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 47675 bases
Position: chr20:27169267-27216941
Accession: 1310019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000029804	RRM_1	PF00076.22	9.4e-22	1	2
ENSRNOP00000029804	RRM_1	PF00076.22	9.4e-22	2	2
ENSRNOP00000064570	RRM_1	PF00076.22	9.4e-22	1	2
ENSRNOP00000064570	RRM_1	PF00076.22	9.4e-22	2	2
ENSRNOP00000069405	RRM_1	PF00076.22	9.4e-22	1	2
ENSRNOP00000069405	RRM_1	PF00076.22	9.4e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000032600	-	1041	XM_003751958	ENSRNOP00000029804	346 (aa)	XP_003752006	D4ABK7
ENSRNOT00000077525	-	1572	-	ENSRNOP00000069405	346 (aa)	-	D4ABK7
ENSRNOT00000073617	-	1041	XM_006256376	ENSRNOP00000064570	346 (aa)	XP_006256438	D4ABK7

Gene Model

Click here to download ENSRNOG00000048193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000048193	Hnrnph3	91	59.821	ENSRNOG00000011661	Hnrnph2	90	60.308
ENSRNOG00000048193	Hnrnph3	79	42.238	ENSRNOG00000003392	Grsf1	67	67.532
ENSRNOG00000048193	Hnrnph3	91	63.609	ENSRNOG00000003399	Hnrnph1	90	60.923
ENSRNOG00000048193	Hnrnph3	97	58.232	ENSRNOG00000014562	Hnrnpf	57	71.901

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSG00000096746	HNRNPH3	100	99.422	Homo_sapiens
ENSRNOG00000048193	Hnrnph3	80	69.097	ENSAPOG00000021843	hnrnph3	91	70.000	Acanthochromis_polyacanthus
ENSRNOG00000048193	Hnrnph3	100	98.844	ENSAMEG00000018064	HNRNPH3	100	98.844	Ailuropoda_melanoleuca
ENSRNOG00000048193	Hnrnph3	96	68.276	ENSACIG00000007244	hnrnph3	96	68.085	Amphilophus_citrinellus
ENSRNOG00000048193	Hnrnph3	80	68.056	ENSAOCG00000011957	hnrnph3	91	70.000	Amphiprion_ocellaris
ENSRNOG00000048193	Hnrnph3	80	68.056	ENSAPEG00000006201	hnrnph3	91	70.000	Amphiprion_percula
ENSRNOG00000048193	Hnrnph3	80	67.931	ENSATEG00000021208	hnrnph3	90	69.504	Anabas_testudineus
ENSRNOG00000048193	Hnrnph3	93	84.709	ENSAPLG00000001116	HNRNPH3	91	89.688	Anas_platyrhynchos
ENSRNOG00000048193	Hnrnph3	100	89.914	ENSACAG00000010365	HNRNPH3	91	90.536	Anolis_carolinensis
ENSRNOG00000048193	Hnrnph3	91	70.440	ENSANAG00000024326	HNRNPH3	90	71.519	Aotus_nancymaae
ENSRNOG00000048193	Hnrnph3	79	67.018	ENSACLG00000008447	hnrnph3	92	63.958	Astatotilapia_calliptera
ENSRNOG00000048193	Hnrnph3	80	69.825	ENSAMXG00000021323	hnrnph3	91	71.223	Astyanax_mexicanus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSBTAG00000014316	HNRNPH3	100	99.422	Bos_taurus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCJAG00000019154	HNRNPH3	100	99.422	Callithrix_jacchus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCAFG00000013619	HNRNPH3	100	99.422	Canis_familiaris
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCAFG00020026261	HNRNPH3	100	99.422	Canis_lupus_dingo
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCHIG00000026467	-	100	99.422	Capra_hircus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSTSYG00000005319	-	100	99.422	Carlito_syrichta
ENSRNOG00000048193	Hnrnph3	100	86.127	ENSCAPG00000013030	HNRNPH3	100	86.127	Cavia_aperea
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCPOG00000006397	HNRNPH3	100	99.422	Cavia_porcellus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCCAG00000028531	HNRNPH3	100	99.422	Cebus_capucinus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCATG00000039188	HNRNPH3	100	99.422	Cercocebus_atys
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSCLAG00000010680	HNRNPH3	100	99.133	Chinchilla_lanigera
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCSAG00000007572	HNRNPH3	100	99.422	Chlorocebus_sabaeus
ENSRNOG00000048193	Hnrnph3	95	96.104	ENSCHOG00000012954	HNRNPH3	100	96.104	Choloepus_hoffmanni
ENSRNOG00000048193	Hnrnph3	91	92.138	ENSCPBG00000019569	HNRNPH3	91	92.138	Chrysemys_picta_bellii
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSCANG00000031750	HNRNPH3	100	99.422	Colobus_angolensis_palliatus
ENSRNOG00000048193	Hnrnph3	100	97.688	ENSCGRG00001024086	Hnrnph3	100	97.688	Cricetulus_griseus_chok1gshd
ENSRNOG00000048193	Hnrnph3	100	97.688	ENSCGRG00000017341	Hnrnph3	100	97.688	Cricetulus_griseus_crigri
ENSRNOG00000048193	Hnrnph3	84	67.208	ENSCSEG00000014207	hnrnph3	91	69.858	Cynoglossus_semilaevis
ENSRNOG00000048193	Hnrnph3	80	66.783	ENSCVAG00000010461	HNRNPH3	90	66.308	Cyprinodon_variegatus
ENSRNOG00000048193	Hnrnph3	80	67.606	ENSDARG00000039466	hnrnph3	95	68.293	Danio_rerio
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSDNOG00000004881	HNRNPH3	100	99.422	Dasypus_novemcinctus
ENSRNOG00000048193	Hnrnph3	100	98.266	ENSDORG00000011470	Hnrnph3	100	98.266	Dipodomys_ordii
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSEASG00005015382	HNRNPH3	100	99.422	Equus_asinus_asinus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSECAG00000007190	HNRNPH3	100	99.422	Equus_caballus
ENSRNOG00000048193	Hnrnph3	84	97.590	ENSEEUG00000005025	HNRNPH3	82	97.590	Erinaceus_europaeus
ENSRNOG00000048193	Hnrnph3	80	70.671	ENSELUG00000018424	hnrnph3	91	70.909	Esox_lucius
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSFCAG00000032291	HNRNPH3	100	99.422	Felis_catus
ENSRNOG00000048193	Hnrnph3	93	87.117	ENSFALG00000012964	HNRNPH3	91	86.562	Ficedula_albicollis
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSFDAG00000008155	-	100	99.422	Fukomys_damarensis
ENSRNOG00000048193	Hnrnph3	91	66.984	ENSFDAG00000014531	-	90	66.349	Fukomys_damarensis
ENSRNOG00000048193	Hnrnph3	80	66.783	ENSFHEG00000010727	HNRNPH3	90	66.308	Fundulus_heteroclitus
ENSRNOG00000048193	Hnrnph3	80	69.718	ENSGMOG00000012413	hnrnph3	55	76.860	Gadus_morhua
ENSRNOG00000048193	Hnrnph3	93	87.117	ENSGALG00000003947	HNRNPH3	91	86.562	Gallus_gallus
ENSRNOG00000048193	Hnrnph3	80	66.084	ENSGAFG00000005286	HNRNPH3	92	65.299	Gambusia_affinis
ENSRNOG00000048193	Hnrnph3	89	69.686	ENSGACG00000016118	hnrnph3	89	67.972	Gasterosteus_aculeatus
ENSRNOG00000048193	Hnrnph3	91	86.792	ENSGAGG00000003144	HNRNPH3	91	85.535	Gopherus_agassizii
ENSRNOG00000048193	Hnrnph3	100	95.087	ENSGGOG00000025378	HNRNPH3	100	95.087	Gorilla_gorilla
ENSRNOG00000048193	Hnrnph3	96	67.870	ENSHBUG00000018007	hnrnph3	91	64.982	Haplochromis_burtoni
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSHGLG00000011321	-	100	99.422	Heterocephalus_glaber_female
ENSRNOG00000048193	Hnrnph3	87	84.333	ENSHGLG00000008716	-	95	81.447	Heterocephalus_glaber_female
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSHGLG00100017813	-	100	99.422	Heterocephalus_glaber_male
ENSRNOG00000048193	Hnrnph3	87	84.333	ENSHGLG00100000514	-	95	81.447	Heterocephalus_glaber_male
ENSRNOG00000048193	Hnrnph3	94	66.431	ENSHCOG00000014335	hnrnph3	91	64.875	Hippocampus_comes
ENSRNOG00000048193	Hnrnph3	79	69.825	ENSIPUG00000016015	hnrnph3	90	71.326	Ictalurus_punctatus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSSTOG00000011676	HNRNPH3	100	99.422	Ictidomys_tridecemlineatus
ENSRNOG00000048193	Hnrnph3	100	94.220	ENSJJAG00000022736	-	100	94.220	Jaculus_jaculus
ENSRNOG00000048193	Hnrnph3	99	68.990	ENSKMAG00000020517	hnrnph3	91	68.817	Kryptolebias_marmoratus
ENSRNOG00000048193	Hnrnph3	80	69.310	ENSLBEG00000008709	hnrnph3	88	69.149	Labrus_bergylta
ENSRNOG00000048193	Hnrnph3	52	62.222	ENSLBEG00000001661	hnrnph3	79	62.222	Labrus_bergylta
ENSRNOG00000048193	Hnrnph3	91	65.758	ENSLACG00000013291	HNRNPH3	78	65.244	Latimeria_chalumnae
ENSRNOG00000048193	Hnrnph3	93	70.606	ENSLOCG00000009247	hnrnph3	95	71.166	Lepisosteus_oculatus
ENSRNOG00000048193	Hnrnph3	100	98.559	ENSLAFG00000012955	HNRNPH3	100	98.559	Loxodonta_africana
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSMFAG00000039598	HNRNPH3	100	99.422	Macaca_fascicularis
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSMMUG00000009792	HNRNPH3	100	99.422	Macaca_mulatta
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSMNEG00000038866	HNRNPH3	100	99.422	Macaca_nemestrina
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSMLEG00000038699	HNRNPH3	100	99.133	Mandrillus_leucophaeus
ENSRNOG00000048193	Hnrnph3	94	68.345	ENSMAMG00000020155	hnrnph3	90	68.794	Mastacembelus_armatus
ENSRNOG00000048193	Hnrnph3	82	69.024	ENSMZEG00005011374	hnrnph3	91	67.376	Maylandia_zebra
ENSRNOG00000048193	Hnrnph3	93	81.288	ENSMGAG00000003795	HNRNPH3	91	81.191	Meleagris_gallopavo
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSMAUG00000022233	Hnrnph3	100	99.133	Mesocricetus_auratus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSMICG00000007581	HNRNPH3	100	99.422	Microcebus_murinus
ENSRNOG00000048193	Hnrnph3	100	97.688	ENSMOCG00000008138	Hnrnph3	100	97.688	Microtus_ochrogaster
ENSRNOG00000048193	Hnrnph3	96	68.990	ENSMMOG00000015374	hnrnph3	79	69.176	Mola_mola
ENSRNOG00000048193	Hnrnph3	91	92.744	ENSMODG00000017283	HNRNPH3	91	92.744	Monodelphis_domestica
ENSRNOG00000048193	Hnrnph3	91	65.862	ENSMALG00000005779	hnrnph3	88	66.667	Monopterus_albus
ENSRNOG00000048193	Hnrnph3	100	98.844	MGP_CAROLIEiJ_G0015396	Hnrnph3	100	98.844	Mus_caroli
ENSRNOG00000048193	Hnrnph3	100	100.000	ENSMUSG00000020069	Hnrnph3	100	100.000	Mus_musculus
ENSRNOG00000048193	Hnrnph3	100	99.422	MGP_PahariEiJ_G0030812	Hnrnph3	100	99.422	Mus_pahari
ENSRNOG00000048193	Hnrnph3	100	100.000	MGP_SPRETEiJ_G0016207	Hnrnph3	100	100.000	Mus_spretus
ENSRNOG00000048193	Hnrnph3	93	99.071	ENSMPUG00000011997	HNRNPH3	91	99.071	Mustela_putorius_furo
ENSRNOG00000048193	Hnrnph3	100	95.087	ENSMLUG00000000143	HNRNPH3	100	95.087	Myotis_lucifugus
ENSRNOG00000048193	Hnrnph3	100	98.844	ENSNGAG00000011731	Hnrnph3	100	98.844	Nannospalax_galili
ENSRNOG00000048193	Hnrnph3	96	70.000	ENSNBRG00000004383	hnrnph3	91	68.085	Neolamprologus_brichardi
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSNLEG00000011843	HNRNPH3	100	99.422	Nomascus_leucogenys
ENSRNOG00000048193	Hnrnph3	100	96.254	ENSMEUG00000013139	HNRNPH3	100	96.254	Notamacropus_eugenii
ENSRNOG00000048193	Hnrnph3	100	98.844	ENSOPRG00000014850	HNRNPH3	99	98.844	Ochotona_princeps
ENSRNOG00000048193	Hnrnph3	100	98.555	ENSODEG00000004517	HNRNPH3	100	98.555	Octodon_degus
ENSRNOG00000048193	Hnrnph3	84	68.621	ENSONIG00000017042	hnrnph3	91	67.730	Oreochromis_niloticus
ENSRNOG00000048193	Hnrnph3	91	92.114	ENSOANG00000002260	HNRNPH3	91	92.114	Ornithorhynchus_anatinus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSOCUG00000004443	HNRNPH3	100	99.422	Oryctolagus_cuniculus
ENSRNOG00000048193	Hnrnph3	95	68.182	ENSORLG00000010499	hnrnph3	91	67.730	Oryzias_latipes
ENSRNOG00000048193	Hnrnph3	96	68.881	ENSORLG00020003778	hnrnph3	91	67.730	Oryzias_latipes_hni
ENSRNOG00000048193	Hnrnph3	96	68.531	ENSORLG00015001985	hnrnph3	91	67.376	Oryzias_latipes_hsok
ENSRNOG00000048193	Hnrnph3	96	69.231	ENSOMEG00000005017	hnrnph3	91	67.021	Oryzias_melastigma
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSOGAG00000012493	HNRNPH3	100	99.133	Otolemur_garnettii
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSOARG00000004981	HNRNPH3	100	99.133	Ovis_aries
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPPAG00000033764	HNRNPH3	100	99.422	Pan_paniscus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPPRG00000004134	HNRNPH3	100	99.422	Panthera_pardus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPTIG00000011896	HNRNPH3	100	99.422	Panthera_tigris_altaica
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPTRG00000002553	HNRNPH3	100	99.422	Pan_troglodytes
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPANG00000022105	HNRNPH3	100	99.422	Papio_anubis
ENSRNOG00000048193	Hnrnph3	78	69.173	ENSPKIG00000008373	HNRNPH3	88	69.549	Paramormyrops_kingsleyae
ENSRNOG00000048193	Hnrnph3	91	87.107	ENSPSIG00000007332	HNRNPH3	91	85.849	Pelodiscus_sinensis
ENSRNOG00000048193	Hnrnph3	78	68.727	ENSPMGG00000001373	hnrnph3	96	67.636	Periophthalmus_magnuspinnatus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPEMG00000017748	Hnrnph3	100	99.422	Peromyscus_maniculatus_bairdii
ENSRNOG00000048193	Hnrnph3	91	91.798	ENSPCIG00000014462	HNRNPH3	91	91.798	Phascolarctos_cinereus
ENSRNOG00000048193	Hnrnph3	80	66.434	ENSPFOG00000015322	HNRNPH3	90	67.384	Poecilia_formosa
ENSRNOG00000048193	Hnrnph3	94	66.434	ENSPLAG00000008895	-	90	67.384	Poecilia_latipinna
ENSRNOG00000048193	Hnrnph3	80	65.854	ENSPMEG00000008778	-	89	66.308	Poecilia_mexicana
ENSRNOG00000048193	Hnrnph3	94	66.784	ENSPREG00000009812	HNRNPH3	90	67.384	Poecilia_reticulata
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSPPYG00000002397	HNRNPH3	100	99.133	Pongo_abelii
ENSRNOG00000048193	Hnrnph3	91	94.937	ENSPCAG00000000111	HNRNPH3	91	94.937	Procavia_capensis
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSPCOG00000028162	HNRNPH3	100	99.422	Propithecus_coquereli
ENSRNOG00000048193	Hnrnph3	86	100.000	ENSPVAG00000008037	HNRNPH3	86	100.000	Pteropus_vampyrus
ENSRNOG00000048193	Hnrnph3	82	69.360	ENSPNYG00000016363	hnrnph3	91	67.730	Pundamilia_nyererei
ENSRNOG00000048193	Hnrnph3	80	69.580	ENSPNAG00000000466	hnrnph3	91	70.863	Pygocentrus_nattereri
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSRBIG00000028004	HNRNPH3	100	99.422	Rhinopithecus_bieti
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSRROG00000031653	HNRNPH3	100	99.422	Rhinopithecus_roxellana
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSSBOG00000022722	HNRNPH3	100	99.422	Saimiri_boliviensis_boliviensis
ENSRNOG00000048193	Hnrnph3	100	95.965	ENSSHAG00000010909	HNRNPH3	100	95.965	Sarcophilus_harrisii
ENSRNOG00000048193	Hnrnph3	99	72.302	ENSSFOG00015015000	hnrnph3	90	71.119	Scleropages_formosus
ENSRNOG00000048193	Hnrnph3	80	69.896	ENSSDUG00000000160	hnrnph3	84	70.567	Seriola_dumerili
ENSRNOG00000048193	Hnrnph3	80	69.896	ENSSLDG00000025679	hnrnph3	90	70.567	Seriola_lalandi_dorsalis
ENSRNOG00000048193	Hnrnph3	100	85.549	ENSSARG00000013863	HNRNPH3	100	85.549	Sorex_araneus
ENSRNOG00000048193	Hnrnph3	91	89.937	ENSSPUG00000001687	-	91	89.937	Sphenodon_punctatus
ENSRNOG00000048193	Hnrnph3	50	93.750	ENSSPUG00000009577	-	81	70.866	Sphenodon_punctatus
ENSRNOG00000048193	Hnrnph3	80	68.056	ENSSPAG00000013124	hnrnph3	86	70.357	Stegastes_partitus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSSSCG00000010238	HNRNPH3	100	99.422	Sus_scrofa
ENSRNOG00000048193	Hnrnph3	93	87.117	ENSTGUG00000003609	HNRNPH3	91	86.562	Taeniopygia_guttata
ENSRNOG00000048193	Hnrnph3	96	65.449	ENSTRUG00000023443	hnrnph3	67	80.000	Takifugu_rubripes
ENSRNOG00000048193	Hnrnph3	99	70.609	ENSTNIG00000013788	hnrnph3	98	69.534	Tetraodon_nigroviridis
ENSRNOG00000048193	Hnrnph3	91	93.987	ENSTBEG00000006114	HNRNPH3	91	93.987	Tupaia_belangeri
ENSRNOG00000048193	Hnrnph3	100	99.133	ENSTTRG00000013322	HNRNPH3	100	99.133	Tursiops_truncatus
ENSRNOG00000048193	Hnrnph3	93	98.762	ENSUAMG00000011846	HNRNPH3	98	98.762	Ursus_americanus
ENSRNOG00000048193	Hnrnph3	100	94.798	ENSUMAG00000007264	HNRNPH3	100	94.798	Ursus_maritimus
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSVPAG00000011814	HNRNPH3	100	99.422	Vicugna_pacos
ENSRNOG00000048193	Hnrnph3	100	99.422	ENSVVUG00000020145	HNRNPH3	100	99.422	Vulpes_vulpes
ENSRNOG00000048193	Hnrnph3	96	77.914	ENSXETG00000023567	hnrnph3	95	77.259	Xenopus_tropicalis
ENSRNOG00000048193	Hnrnph3	93	65.672	ENSXCOG00000012095	hnrnph3	91	65.299	Xiphophorus_couchianus
ENSRNOG00000048193	Hnrnph3	80	66.434	ENSXMAG00000014775	HNRNPH3	90	67.384	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0030855	epithelial cell differentiation	-	IEA	Process
GO:0030855	epithelial cell differentiation	-	ISO	Process