EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSRNOG00000048230 (Gene tree)
Gene ID: -
Gene Symbol: AABR07056118.1
Alias: -
Full Name: Rattus norvegicus
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 217774 bases
Position: chr7:20262680-20480453
Accession: NM_001013952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000049057	RIO1	PF01163.22	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000046378	AABR07056118.1-201	3964	-	ENSRNOP00000049057	277 (aa)	-	F7EN76

Gene Model

Click here to download ENSRNOG00000048230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000048230	AABR07056118.1	95	39.924	ENSRNOG00000059551	RGD1560718	52	39.924
ENSRNOG00000048230	AABR07056118.1	91	40.476	ENSRNOG00000025799	RGD1560303	51	40.476
ENSRNOG00000048230	AABR07056118.1	91	32.090	ENSRNOG00000017332	Dapk2	73	32.090
ENSRNOG00000048230	AABR07056118.1	99	38.849	ENSRNOG00000052093	Smok2a	55	38.849
ENSRNOG00000048230	AABR07056118.1	100	97.834	ENSRNOG00000051596	AABR07056131.1	100	97.834
ENSRNOG00000048230	AABR07056118.1	92	30.566	ENSRNOG00000004362	Rps6ka5	67	30.566
ENSRNOG00000048230	AABR07056118.1	91	38.431	ENSRNOG00000030145	RGD1561667	50	38.431
ENSRNOG00000048230	AABR07056118.1	95	41.445	ENSRNOG00000024200	LOC690235	52	41.445
ENSRNOG00000048230	AABR07056118.1	93	39.922	ENSRNOG00000028913	AABR07028872.1	82	39.922