EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000048277 (Gene tree)
Gene ID: -
Gene Symbol: AABR07035787.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4372 bases
Position: chr12:22466601-22470972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065372	ARS2	PF04959.13	7.4e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074544	AABR07035787.1-201	1470	-	ENSRNOP00000065372	489 (aa)	-	M0R7E6

Gene Model

Click here to download ENSRNOG00000048277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048277	AABR07035787.1	93	87.069	ENSG00000087087	SRRT	93	87.069	Homo_sapiens
ENSRNOG00000048277	AABR07035787.1	92	66.594	ENSAPOG00000002304	srrt	51	66.594	Acanthochromis_polyacanthus
ENSRNOG00000048277	AABR07035787.1	93	85.776	ENSAMEG00000014506	SRRT	52	85.776	Ailuropoda_melanoleuca
ENSRNOG00000048277	AABR07035787.1	92	66.594	ENSACIG00000015795	srrt	56	66.594	Amphilophus_citrinellus
ENSRNOG00000048277	AABR07035787.1	92	66.812	ENSAOCG00000009693	srrt	56	66.812	Amphiprion_ocellaris
ENSRNOG00000048277	AABR07035787.1	96	52.738	ENSAOCG00000009189	-	52	55.769	Amphiprion_ocellaris
ENSRNOG00000048277	AABR07035787.1	92	66.376	ENSAPEG00000003646	srrt	57	66.376	Amphiprion_percula
ENSRNOG00000048277	AABR07035787.1	96	52.738	ENSAPEG00000020016	-	52	55.769	Amphiprion_percula
ENSRNOG00000048277	AABR07035787.1	92	64.847	ENSATEG00000014425	srrt	55	65.502	Anabas_testudineus
ENSRNOG00000048277	AABR07035787.1	97	50.898	ENSATEG00000003652	-	85	54.123	Anabas_testudineus
ENSRNOG00000048277	AABR07035787.1	94	72.863	ENSACAG00000001014	SRRT	52	72.826	Anolis_carolinensis
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSANAG00000031718	SRRT	54	85.563	Aotus_nancymaae
ENSRNOG00000048277	AABR07035787.1	97	52.653	ENSACLG00000009423	-	52	54.487	Astatotilapia_calliptera
ENSRNOG00000048277	AABR07035787.1	92	65.284	ENSACLG00000013156	srrt	50	65.284	Astatotilapia_calliptera
ENSRNOG00000048277	AABR07035787.1	90	65.487	ENSAMXG00000016671	srrt	50	66.004	Astyanax_mexicanus
ENSRNOG00000048277	AABR07035787.1	93	84.713	ENSBTAG00000001134	SRRT	54	84.713	Bos_taurus
ENSRNOG00000048277	AABR07035787.1	80	37.674	WBGene00017085	E01A2.2	85	36.458	Caenorhabditis_elegans
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSCJAG00000014917	SRRT	54	85.563	Callithrix_jacchus
ENSRNOG00000048277	AABR07035787.1	94	86.017	ENSCAFG00000023538	SRRT	54	85.957	Canis_familiaris
ENSRNOG00000048277	AABR07035787.1	94	84.958	ENSCAFG00020013358	SRRT	54	84.894	Canis_lupus_dingo
ENSRNOG00000048277	AABR07035787.1	93	84.501	ENSCHIG00000010495	SRRT	54	84.501	Capra_hircus
ENSRNOG00000048277	AABR07035787.1	93	84.076	ENSTSYG00000036426	SRRT	57	84.076	Carlito_syrichta
ENSRNOG00000048277	AABR07035787.1	93	85.345	ENSCAPG00000013586	SRRT	91	85.294	Cavia_aperea
ENSRNOG00000048277	AABR07035787.1	93	84.958	ENSCPOG00000001739	SRRT	54	84.958	Cavia_porcellus
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSCCAG00000015877	SRRT	54	85.775	Cebus_capucinus
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSCATG00000036306	SRRT	54	85.563	Cercocebus_atys
ENSRNOG00000048277	AABR07035787.1	93	85.714	ENSCLAG00000007568	SRRT	91	85.714	Chinchilla_lanigera
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSCSAG00000017996	SRRT	54	85.775	Chlorocebus_sabaeus
ENSRNOG00000048277	AABR07035787.1	99	41.002	ENSCING00000003506	-	54	43.265	Ciona_intestinalis
ENSRNOG00000048277	AABR07035787.1	99	41.968	ENSCSAVG00000008394	-	57	45.143	Ciona_savignyi
ENSRNOG00000048277	AABR07035787.1	93	84.713	ENSCANG00000034556	SRRT	54	84.713	Colobus_angolensis_palliatus
ENSRNOG00000048277	AABR07035787.1	93	85.714	ENSCGRG00001001594	Srrt	53	85.714	Cricetulus_griseus_chok1gshd
ENSRNOG00000048277	AABR07035787.1	93	86.510	ENSCGRG00000007292	Srrt	90	86.510	Cricetulus_griseus_crigri
ENSRNOG00000048277	AABR07035787.1	92	61.488	ENSCSEG00000017878	srrt	50	62.363	Cynoglossus_semilaevis
ENSRNOG00000048277	AABR07035787.1	97	51.434	ENSCSEG00000005233	-	54	52.239	Cynoglossus_semilaevis
ENSRNOG00000048277	AABR07035787.1	87	52.752	ENSCVAG00000017344	-	51	52.752	Cyprinodon_variegatus
ENSRNOG00000048277	AABR07035787.1	92	65.721	ENSCVAG00000019848	srrt	54	65.721	Cyprinodon_variegatus
ENSRNOG00000048277	AABR07035787.1	92	65.795	ENSDARG00000017762	srrt	51	67.320	Danio_rerio
ENSRNOG00000048277	AABR07035787.1	93	85.897	ENSDNOG00000003851	SRRT	53	85.897	Dasypus_novemcinctus
ENSRNOG00000048277	AABR07035787.1	93	85.684	ENSDORG00000005584	Srrt	91	85.532	Dipodomys_ordii
ENSRNOG00000048277	AABR07035787.1	93	82.563	ENSETEG00000016175	SRRT	54	82.563	Echinops_telfairi
ENSRNOG00000048277	AABR07035787.1	92	52.711	ENSEBUG00000008517	-	65	51.812	Eptatretus_burgeri
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSEASG00005016956	SRRT	54	85.775	Equus_asinus_asinus
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSECAG00000012292	SRRT	54	85.775	Equus_caballus
ENSRNOG00000048277	AABR07035787.1	92	65.302	ENSELUG00000006651	srrt	50	65.948	Esox_lucius
ENSRNOG00000048277	AABR07035787.1	92	55.042	ENSELUG00000021216	-	53	55.672	Esox_lucius
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSFCAG00000006855	SRRT	54	85.563	Felis_catus
ENSRNOG00000048277	AABR07035787.1	93	80.174	ENSFDAG00000021347	SRRT	90	81.046	Fukomys_damarensis
ENSRNOG00000048277	AABR07035787.1	82	68.227	ENSFHEG00000002756	srrt	53	68.395	Fundulus_heteroclitus
ENSRNOG00000048277	AABR07035787.1	96	54.132	ENSFHEG00000004105	-	93	55.054	Fundulus_heteroclitus
ENSRNOG00000048277	AABR07035787.1	89	52.339	ENSGMOG00000018694	-	53	52.632	Gadus_morhua
ENSRNOG00000048277	AABR07035787.1	92	60.304	ENSGMOG00000018619	srrt	51	61.605	Gadus_morhua
ENSRNOG00000048277	AABR07035787.1	92	65.284	ENSGAFG00000005423	srrt	51	65.284	Gambusia_affinis
ENSRNOG00000048277	AABR07035787.1	92	50.535	ENSGAFG00000020383	-	54	50.749	Gambusia_affinis
ENSRNOG00000048277	AABR07035787.1	97	48.594	ENSGACG00000001100	-	53	51.805	Gasterosteus_aculeatus
ENSRNOG00000048277	AABR07035787.1	97	63.768	ENSGACG00000020387	srrt	51	65.293	Gasterosteus_aculeatus
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSGGOG00000001508	SRRT	60	94.475	Gorilla_gorilla
ENSRNOG00000048277	AABR07035787.1	92	65.502	ENSHBUG00000002942	srrt	50	65.502	Haplochromis_burtoni
ENSRNOG00000048277	AABR07035787.1	93	85.928	ENSHGLG00000008344	Srrt	91	85.928	Heterocephalus_glaber_female
ENSRNOG00000048277	AABR07035787.1	93	85.897	ENSHGLG00100018857	Srrt	91	85.897	Heterocephalus_glaber_male
ENSRNOG00000048277	AABR07035787.1	93	49.478	ENSHCOG00000008904	-	56	51.178	Hippocampus_comes
ENSRNOG00000048277	AABR07035787.1	96	61.795	ENSHCOG00000005403	srrt	56	62.609	Hippocampus_comes
ENSRNOG00000048277	AABR07035787.1	92	65.727	ENSIPUG00000021150	srrt	51	66.594	Ictalurus_punctatus
ENSRNOG00000048277	AABR07035787.1	94	84.778	ENSSTOG00000013776	SRRT	54	84.713	Ictidomys_tridecemlineatus
ENSRNOG00000048277	AABR07035787.1	99	84.569	ENSJJAG00000010446	Srrt	91	85.470	Jaculus_jaculus
ENSRNOG00000048277	AABR07035787.1	97	52.087	ENSKMAG00000008468	-	53	52.292	Kryptolebias_marmoratus
ENSRNOG00000048277	AABR07035787.1	97	63.542	ENSKMAG00000013599	srrt	54	65.284	Kryptolebias_marmoratus
ENSRNOG00000048277	AABR07035787.1	92	64.147	ENSLBEG00000016308	srrt	54	65.875	Labrus_bergylta
ENSRNOG00000048277	AABR07035787.1	92	66.297	ENSLOCG00000013658	srrt	52	67.184	Lepisosteus_oculatus
ENSRNOG00000048277	AABR07035787.1	93	85.684	ENSLAFG00000007725	SRRT	54	85.684	Loxodonta_africana
ENSRNOG00000048277	AABR07035787.1	93	84.713	ENSMFAG00000033745	SRRT	57	84.342	Macaca_fascicularis
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSMMUG00000021255	SRRT	54	85.775	Macaca_mulatta
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSMNEG00000041864	SRRT	54	85.775	Macaca_nemestrina
ENSRNOG00000048277	AABR07035787.1	93	84.713	ENSMLEG00000029479	SRRT	56	84.342	Mandrillus_leucophaeus
ENSRNOG00000048277	AABR07035787.1	97	52.857	ENSMAMG00000010681	-	52	55.983	Mastacembelus_armatus
ENSRNOG00000048277	AABR07035787.1	92	64.410	ENSMAMG00000014311	srrt	51	65.284	Mastacembelus_armatus
ENSRNOG00000048277	AABR07035787.1	97	52.653	ENSMZEG00005028002	-	52	54.487	Maylandia_zebra
ENSRNOG00000048277	AABR07035787.1	92	65.284	ENSMZEG00005016135	srrt	50	65.284	Maylandia_zebra
ENSRNOG00000048277	AABR07035787.1	93	87.366	ENSMAUG00000011386	Srrt	91	87.393	Mesocricetus_auratus
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSMICG00000009471	SRRT	54	85.563	Microcebus_murinus
ENSRNOG00000048277	AABR07035787.1	93	87.821	ENSMOCG00000001971	Srrt	91	87.821	Microtus_ochrogaster
ENSRNOG00000048277	AABR07035787.1	92	55.172	ENSMMOG00000011137	-	55	54.329	Mola_mola
ENSRNOG00000048277	AABR07035787.1	92	65.284	ENSMMOG00000016399	srrt	54	65.502	Mola_mola
ENSRNOG00000048277	AABR07035787.1	93	76.582	ENSMODG00000004862	SRRT	90	78.316	Monodelphis_domestica
ENSRNOG00000048277	AABR07035787.1	92	61.926	ENSMALG00000018604	srrt	53	62.582	Monopterus_albus
ENSRNOG00000048277	AABR07035787.1	99	50.308	ENSMALG00000005567	-	84	51.220	Monopterus_albus
ENSRNOG00000048277	AABR07035787.1	93	87.846	MGP_CAROLIEiJ_G0027870	Srrt	100	94.853	Mus_caroli
ENSRNOG00000048277	AABR07035787.1	93	88.060	ENSMUSG00000037364	Srrt	99	94.853	Mus_musculus
ENSRNOG00000048277	AABR07035787.1	93	87.420	MGP_PahariEiJ_G0024456	Srrt	100	94.485	Mus_pahari
ENSRNOG00000048277	AABR07035787.1	93	88.060	MGP_SPRETEiJ_G0028875	Srrt	100	94.853	Mus_spretus
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSMPUG00000015839	SRRT	54	85.775	Mustela_putorius_furo
ENSRNOG00000048277	AABR07035787.1	93	85.138	ENSMLUG00000009975	SRRT	54	85.138	Myotis_lucifugus
ENSRNOG00000048277	AABR07035787.1	93	85.987	ENSNGAG00000023715	Srrt	65	85.987	Nannospalax_galili
ENSRNOG00000048277	AABR07035787.1	92	64.333	ENSNBRG00000019100	srrt	52	64.333	Neolamprologus_brichardi
ENSRNOG00000048277	AABR07035787.1	91	71.554	ENSNLEG00000011987	SRRT	54	69.978	Nomascus_leucogenys
ENSRNOG00000048277	AABR07035787.1	99	65.408	ENSMEUG00000011941	SRRT	53	66.809	Notamacropus_eugenii
ENSRNOG00000048277	AABR07035787.1	82	81.022	ENSOPRG00000002502	-	51	81.022	Ochotona_princeps
ENSRNOG00000048277	AABR07035787.1	93	85.867	ENSODEG00000016856	SRRT	91	85.897	Octodon_degus
ENSRNOG00000048277	AABR07035787.1	97	52.546	ENSONIG00000016080	-	52	53.305	Oreochromis_niloticus
ENSRNOG00000048277	AABR07035787.1	92	65.721	ENSONIG00000004242	srrt	52	64.946	Oreochromis_niloticus
ENSRNOG00000048277	AABR07035787.1	97	63.333	ENSORLG00000008120	srrt	52	64.847	Oryzias_latipes
ENSRNOG00000048277	AABR07035787.1	95	63.771	ENSORLG00020003058	srrt	52	64.629	Oryzias_latipes_hni
ENSRNOG00000048277	AABR07035787.1	97	63.125	ENSORLG00015008062	srrt	52	64.629	Oryzias_latipes_hsok
ENSRNOG00000048277	AABR07035787.1	92	54.390	ENSOMEG00000006963	-	53	54.506	Oryzias_melastigma
ENSRNOG00000048277	AABR07035787.1	100	62.200	ENSOMEG00000003155	srrt	56	65.066	Oryzias_melastigma
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSOGAG00000017242	SRRT	54	85.563	Otolemur_garnettii
ENSRNOG00000048277	AABR07035787.1	93	83.439	ENSOARG00000015645	SRRT	54	83.439	Ovis_aries
ENSRNOG00000048277	AABR07035787.1	93	84.713	ENSPPAG00000041090	SRRT	54	84.713	Pan_paniscus
ENSRNOG00000048277	AABR07035787.1	93	83.864	ENSPPRG00000009557	SRRT	53	83.864	Panthera_pardus
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSPTIG00000014355	SRRT	54	85.563	Panthera_tigris_altaica
ENSRNOG00000048277	AABR07035787.1	93	84.713	ENSPTRG00000019511	SRRT	54	84.713	Pan_troglodytes
ENSRNOG00000048277	AABR07035787.1	93	84.342	ENSPANG00000020763	SRRT	55	84.342	Papio_anubis
ENSRNOG00000048277	AABR07035787.1	97	64.959	ENSPKIG00000005434	srrt	54	67.527	Paramormyrops_kingsleyae
ENSRNOG00000048277	AABR07035787.1	92	65.435	ENSPKIG00000022212	-	52	65.217	Paramormyrops_kingsleyae
ENSRNOG00000048277	AABR07035787.1	94	76.395	ENSPSIG00000016311	SRRT	53	75.541	Pelodiscus_sinensis
ENSRNOG00000048277	AABR07035787.1	92	64.440	ENSPMGG00000002841	srrt	56	62.716	Periophthalmus_magnuspinnatus
ENSRNOG00000048277	AABR07035787.1	93	86.207	ENSPEMG00000010834	Srrt	90	85.867	Peromyscus_maniculatus_bairdii
ENSRNOG00000048277	AABR07035787.1	99	52.268	ENSPMAG00000009614	-	55	53.975	Petromyzon_marinus
ENSRNOG00000048277	AABR07035787.1	94	80.544	ENSPCIG00000000816	SRRT	54	82.030	Phascolarctos_cinereus
ENSRNOG00000048277	AABR07035787.1	92	50.964	ENSPFOG00000016554	-	54	51.178	Poecilia_formosa
ENSRNOG00000048277	AABR07035787.1	92	65.142	ENSPFOG00000005704	srrt	51	65.142	Poecilia_formosa
ENSRNOG00000048277	AABR07035787.1	92	64.629	ENSPLAG00000021992	srrt	51	64.629	Poecilia_latipinna
ENSRNOG00000048277	AABR07035787.1	92	50.641	ENSPLAG00000004526	-	55	50.855	Poecilia_latipinna
ENSRNOG00000048277	AABR07035787.1	92	64.706	ENSPMEG00000001182	srrt	57	64.348	Poecilia_mexicana
ENSRNOG00000048277	AABR07035787.1	87	49.321	ENSPMEG00000001520	-	53	49.548	Poecilia_mexicana
ENSRNOG00000048277	AABR07035787.1	92	64.924	ENSPREG00000022308	srrt	51	64.924	Poecilia_reticulata
ENSRNOG00000048277	AABR07035787.1	93	67.516	ENSPPYG00000017432	SRRT	50	67.516	Pongo_abelii
ENSRNOG00000048277	AABR07035787.1	93	84.454	ENSPCAG00000001621	SRRT	54	84.454	Procavia_capensis
ENSRNOG00000048277	AABR07035787.1	93	85.563	ENSPCOG00000025751	SRRT	54	85.563	Propithecus_coquereli
ENSRNOG00000048277	AABR07035787.1	81	97.059	ENSPVAG00000000834	SRRT	55	96.505	Pteropus_vampyrus
ENSRNOG00000048277	AABR07035787.1	92	65.284	ENSPNYG00000018710	srrt	52	65.284	Pundamilia_nyererei
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSRBIG00000035718	SRRT	66	92.308	Rhinopithecus_bieti
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSRROG00000030622	SRRT	66	92.308	Rhinopithecus_roxellana
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSSBOG00000033570	SRRT	54	85.775	Saimiri_boliviensis_boliviensis
ENSRNOG00000048277	AABR07035787.1	96	79.303	ENSSHAG00000007349	-	75	81.474	Sarcophilus_harrisii
ENSRNOG00000048277	AABR07035787.1	93	68.980	ENSSFOG00015017293	srrt	51	69.631	Scleropages_formosus
ENSRNOG00000048277	AABR07035787.1	92	50.731	ENSSMAG00000018195	-	57	51.055	Scophthalmus_maximus
ENSRNOG00000048277	AABR07035787.1	92	65.066	ENSSMAG00000015342	srrt	54	65.939	Scophthalmus_maximus
ENSRNOG00000048277	AABR07035787.1	95	53.209	ENSSDUG00000002051	-	93	53.165	Seriola_dumerili
ENSRNOG00000048277	AABR07035787.1	92	65.721	ENSSDUG00000012049	srrt	53	66.376	Seriola_dumerili
ENSRNOG00000048277	AABR07035787.1	92	65.284	ENSSLDG00000017477	srrt	54	66.157	Seriola_lalandi_dorsalis
ENSRNOG00000048277	AABR07035787.1	92	53.509	ENSSPAG00000018943	-	93	54.923	Stegastes_partitus
ENSRNOG00000048277	AABR07035787.1	92	65.510	ENSSPAG00000005665	srrt	51	65.510	Stegastes_partitus
ENSRNOG00000048277	AABR07035787.1	82	88.564	ENSSSCG00000024789	SRRT	50	88.564	Sus_scrofa
ENSRNOG00000048277	AABR07035787.1	92	49.024	ENSTRUG00000000023	-	51	49.774	Takifugu_rubripes
ENSRNOG00000048277	AABR07035787.1	92	63.812	ENSTRUG00000016075	srrt	52	64.468	Takifugu_rubripes
ENSRNOG00000048277	AABR07035787.1	97	49.593	ENSTNIG00000003111	-	53	52.017	Tetraodon_nigroviridis
ENSRNOG00000048277	AABR07035787.1	92	63.002	ENSTNIG00000011779	srrt	72	63.866	Tetraodon_nigroviridis
ENSRNOG00000048277	AABR07035787.1	67	48.980	ENSTNIG00000019765	-	95	50.311	Tetraodon_nigroviridis
ENSRNOG00000048277	AABR07035787.1	93	85.350	ENSTTRG00000011104	SRRT	54	85.350	Tursiops_truncatus
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSUAMG00000027997	SRRT	55	85.775	Ursus_americanus
ENSRNOG00000048277	AABR07035787.1	93	85.775	ENSUMAG00000011295	SRRT	54	85.775	Ursus_maritimus
ENSRNOG00000048277	AABR07035787.1	94	86.017	ENSVVUG00000023572	SRRT	54	85.957	Vulpes_vulpes
ENSRNOG00000048277	AABR07035787.1	92	65.659	ENSXETG00000025124	srrt	53	65.659	Xenopus_tropicalis
ENSRNOG00000048277	AABR07035787.1	92	50.330	ENSXCOG00000013105	-	90	50.549	Xiphophorus_couchianus
ENSRNOG00000048277	AABR07035787.1	92	50.968	ENSXMAG00000002090	-	54	51.828	Xiphophorus_maculatus
ENSRNOG00000048277	AABR07035787.1	92	65.721	ENSXMAG00000007627	srrt	56	65.359	Xiphophorus_maculatus