EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000048297 (Gene tree)
Gene ID: 108348175
Gene Symbol: LOC108348175
Alias: -
Full Name: protein quaking-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 224207 bases
Position: chr1:50828134-51052340
Accession: 11514364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069203	KH_1	PF00013.29	4.2e-06	1	1
ENSRNOP00000023290	KH_1	PF00013.29	4.2e-06	1	1
ENSRNOP00000034413	KH_1	PF00013.29	4.4e-06	1	1
ENSRNOP00000070460	KH_1	PF00013.29	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000035402	-	1005	-	ENSRNOP00000034413	335 (aa)	-	F1LMH5
ENSRNOT00000086441	-	1020	-	ENSRNOP00000070460	340 (aa)	-	A0A0G2JXZ5
ENSRNOT00000089149	-	1631	-	ENSRNOP00000069203	323 (aa)	-	A0A0G2JUS0
ENSRNOT00000023290	-	972	-	ENSRNOP00000023290	324 (aa)	-	D4A2X0

Gene Model

Click here to download ENSRNOG00000048297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000048297	LOC108348175	58	41.579	ENSRNOG00000012284	Khdrbs2	77	35.862
ENSRNOG00000048297	LOC108348175	72	36.820	ENSRNOG00000009539	Khdrbs3	77	35.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048297	LOC108348175	100	98.810	ENSG00000112531	QKI	100	100.000	Homo_sapiens
ENSRNOG00000048297	LOC108348175	100	76.833	ENSAPOG00000002713	qki2	98	77.532	Acanthochromis_polyacanthus
ENSRNOG00000048297	LOC108348175	100	97.917	ENSAMEG00000008459	QKI	99	97.917	Ailuropoda_melanoleuca
ENSRNOG00000048297	LOC108348175	96	77.460	ENSAOCG00000014271	qki2	98	77.532	Amphiprion_ocellaris
ENSRNOG00000048297	LOC108348175	96	77.460	ENSAPEG00000008210	qki2	98	77.532	Amphiprion_percula
ENSRNOG00000048297	LOC108348175	99	80.675	ENSATEG00000022584	qkib	93	80.675	Anabas_testudineus
ENSRNOG00000048297	LOC108348175	100	76.833	ENSATEG00000004355	qki2	99	77.215	Anabas_testudineus
ENSRNOG00000048297	LOC108348175	86	99.308	ENSAPLG00000010080	QKI	100	99.308	Anas_platyrhynchos
ENSRNOG00000048297	LOC108348175	100	97.917	ENSACAG00000003270	QKI	100	97.067	Anolis_carolinensis
ENSRNOG00000048297	LOC108348175	100	98.810	ENSANAG00000029669	QKI	100	98.769	Aotus_nancymaae
ENSRNOG00000048297	LOC108348175	100	76.540	ENSACLG00000026838	qki2	98	76.899	Astatotilapia_calliptera
ENSRNOG00000048297	LOC108348175	95	78.981	ENSACLG00000007900	qkib	90	79.048	Astatotilapia_calliptera
ENSRNOG00000048297	LOC108348175	96	92.063	ENSAMXG00000015808	qkib	98	92.089	Astyanax_mexicanus
ENSRNOG00000048297	LOC108348175	100	89.318	ENSAMXG00000042623	qki2	100	88.596	Astyanax_mexicanus
ENSRNOG00000048297	LOC108348175	100	98.810	ENSBTAG00000011593	QKI	100	97.947	Bos_taurus
ENSRNOG00000048297	LOC108348175	100	98.810	ENSCJAG00000012368	QKI	100	98.769	Callithrix_jacchus
ENSRNOG00000048297	LOC108348175	100	95.280	ENSCAFG00000000772	QKI	100	98.951	Canis_familiaris
ENSRNOG00000048297	LOC108348175	100	98.769	ENSCAFG00020019085	QKI	100	98.769	Canis_lupus_dingo
ENSRNOG00000048297	LOC108348175	100	98.810	ENSCHIG00000018891	QKI	100	98.769	Capra_hircus
ENSRNOG00000048297	LOC108348175	86	100.000	ENSTSYG00000036757	QKI	100	100.000	Carlito_syrichta
ENSRNOG00000048297	LOC108348175	100	98.810	ENSCCAG00000025230	QKI	100	98.769	Cebus_capucinus
ENSRNOG00000048297	LOC108348175	100	98.810	ENSCATG00000037623	-	100	98.769	Cercocebus_atys
ENSRNOG00000048297	LOC108348175	92	94.498	ENSCLAG00000006238	-	100	100.000	Chinchilla_lanigera
ENSRNOG00000048297	LOC108348175	100	96.131	ENSCSAG00000012257	QKI	100	95.308	Chlorocebus_sabaeus
ENSRNOG00000048297	LOC108348175	97	88.957	ENSCHOG00000006651	QKI	97	87.915	Choloepus_hoffmanni
ENSRNOG00000048297	LOC108348175	100	86.012	ENSCPBG00000019817	QKI	100	85.337	Chrysemys_picta_bellii
ENSRNOG00000048297	LOC108348175	100	98.810	ENSCANG00000000415	QKI	100	98.769	Colobus_angolensis_palliatus
ENSRNOG00000048297	LOC108348175	100	98.810	ENSCGRG00001012114	Qk	100	98.769	Cricetulus_griseus_chok1gshd
ENSRNOG00000048297	LOC108348175	57	100.000	ENSCGRG00000011540	Qk	100	98.802	Cricetulus_griseus_crigri
ENSRNOG00000048297	LOC108348175	96	76.825	ENSCSEG00000013480	qki2	94	76.899	Cynoglossus_semilaevis
ENSRNOG00000048297	LOC108348175	100	77.419	ENSCVAG00000013803	qki2	98	77.419	Cyprinodon_variegatus
ENSRNOG00000048297	LOC108348175	96	89.103	ENSDARG00000010018	qki2	99	88.291	Danio_rerio
ENSRNOG00000048297	LOC108348175	100	91.420	ENSDARG00000002026	qkib	100	96.269	Danio_rerio
ENSRNOG00000048297	LOC108348175	91	96.753	ENSDORG00000008151	Qk	100	100.000	Dipodomys_ordii
ENSRNOG00000048297	LOC108348175	86	99.306	ENSETEG00000007676	QKI	100	98.294	Echinops_telfairi
ENSRNOG00000048297	LOC108348175	96	58.769	ENSEBUG00000009508	qki2	98	59.692	Eptatretus_burgeri
ENSRNOG00000048297	LOC108348175	95	55.491	ENSEBUG00000013799	qki2	99	57.061	Eptatretus_burgeri
ENSRNOG00000048297	LOC108348175	100	98.810	ENSEASG00005019724	QKI	100	97.947	Equus_asinus_asinus
ENSRNOG00000048297	LOC108348175	100	98.810	ENSECAG00000017504	QKI	100	98.769	Equus_caballus
ENSRNOG00000048297	LOC108348175	86	82.986	ENSEEUG00000012054	QKI	100	82.253	Erinaceus_europaeus
ENSRNOG00000048297	LOC108348175	100	69.741	ENSELUG00000002282	qki2	100	69.301	Esox_lucius
ENSRNOG00000048297	LOC108348175	100	89.318	ENSELUG00000016698	QKI	99	89.318	Esox_lucius
ENSRNOG00000048297	LOC108348175	100	98.462	ENSFCAG00000019399	QKI	100	98.462	Felis_catus
ENSRNOG00000048297	LOC108348175	86	99.308	ENSFALG00000012183	QKI	97	97.959	Ficedula_albicollis
ENSRNOG00000048297	LOC108348175	86	100.000	ENSFDAG00000006081	QKI	100	100.000	Fukomys_damarensis
ENSRNOG00000048297	LOC108348175	100	78.006	ENSFHEG00000009423	qki2	98	78.006	Fundulus_heteroclitus
ENSRNOG00000048297	LOC108348175	100	72.414	ENSGMOG00000004107	qki2	99	72.414	Gadus_morhua
ENSRNOG00000048297	LOC108348175	100	97.917	ENSGALG00000011555	QKI	100	97.067	Gallus_gallus
ENSRNOG00000048297	LOC108348175	100	76.246	ENSGAFG00000011092	qki2	98	76.246	Gambusia_affinis
ENSRNOG00000048297	LOC108348175	100	75.367	ENSGACG00000003206	qki2	99	75.776	Gasterosteus_aculeatus
ENSRNOG00000048297	LOC108348175	100	96.131	ENSGAGG00000003901	QKI	98	98.397	Gopherus_agassizii
ENSRNOG00000048297	LOC108348175	100	98.810	ENSGGOG00000000733	QKI	100	98.769	Gorilla_gorilla
ENSRNOG00000048297	LOC108348175	94	80.064	ENSHBUG00000015851	qkib	90	80.128	Haplochromis_burtoni
ENSRNOG00000048297	LOC108348175	100	76.833	ENSHBUG00000009123	qki2	99	76.875	Haplochromis_burtoni
ENSRNOG00000048297	LOC108348175	86	100.000	ENSHGLG00000003074	-	100	100.000	Heterocephalus_glaber_female
ENSRNOG00000048297	LOC108348175	86	100.000	ENSHGLG00100000339	-	100	100.000	Heterocephalus_glaber_male
ENSRNOG00000048297	LOC108348175	100	75.073	ENSHCOG00000015404	qki2	98	75.073	Hippocampus_comes
ENSRNOG00000048297	LOC108348175	96	91.139	ENSIPUG00000012637	qki	100	90.343	Ictalurus_punctatus
ENSRNOG00000048297	LOC108348175	100	87.870	ENSIPUG00000014732	qki2	100	87.172	Ictalurus_punctatus
ENSRNOG00000048297	LOC108348175	86	100.000	ENSSTOG00000009113	QKI	100	100.000	Ictidomys_tridecemlineatus
ENSRNOG00000048297	LOC108348175	86	99.278	ENSJJAG00000022765	Qk	100	99.278	Jaculus_jaculus
ENSRNOG00000048297	LOC108348175	100	77.353	ENSKMAG00000009024	qki2	99	77.188	Kryptolebias_marmoratus
ENSRNOG00000048297	LOC108348175	99	67.781	ENSLBEG00000022702	qkib	93	67.781	Labrus_bergylta
ENSRNOG00000048297	LOC108348175	100	77.353	ENSLBEG00000027428	qki2	98	77.532	Labrus_bergylta
ENSRNOG00000048297	LOC108348175	84	96.809	ENSLACG00000015585	QKI	100	95.819	Latimeria_chalumnae
ENSRNOG00000048297	LOC108348175	96	96.154	ENSLOCG00000016506	qki2	98	96.166	Lepisosteus_oculatus
ENSRNOG00000048297	LOC108348175	90	97.360	ENSLAFG00000021654	QKI	100	97.260	Loxodonta_africana
ENSRNOG00000048297	LOC108348175	86	97.222	ENSMFAG00000044069	-	100	97.037	Macaca_fascicularis
ENSRNOG00000048297	LOC108348175	95	93.506	ENSMMUG00000000428	-	100	98.976	Macaca_mulatta
ENSRNOG00000048297	LOC108348175	90	72.069	ENSMMUG00000049158	-	95	73.196	Macaca_mulatta
ENSRNOG00000048297	LOC108348175	98	93.902	ENSMNEG00000043724	-	99	93.691	Macaca_nemestrina
ENSRNOG00000048297	LOC108348175	86	100.000	ENSMLEG00000033347	-	100	100.000	Mandrillus_leucophaeus
ENSRNOG00000048297	LOC108348175	100	76.833	ENSMAMG00000003069	qki2	98	76.833	Mastacembelus_armatus
ENSRNOG00000048297	LOC108348175	99	80.675	ENSMAMG00000022446	qkib	93	80.675	Mastacembelus_armatus
ENSRNOG00000048297	LOC108348175	95	78.981	ENSMZEG00005018363	qkib	90	79.487	Maylandia_zebra
ENSRNOG00000048297	LOC108348175	100	76.540	ENSMZEG00005004737	qki2	98	76.899	Maylandia_zebra
ENSRNOG00000048297	LOC108348175	86	97.924	ENSMGAG00000012341	QKI	100	97.232	Meleagris_gallopavo
ENSRNOG00000048297	LOC108348175	87	98.621	ENSMAUG00000001920	Qk	100	98.917	Mesocricetus_auratus
ENSRNOG00000048297	LOC108348175	100	98.810	ENSMICG00000009220	QKI	100	98.769	Microcebus_murinus
ENSRNOG00000048297	LOC108348175	90	97.030	ENSMOCG00000008370	Qk	100	99.639	Microtus_ochrogaster
ENSRNOG00000048297	LOC108348175	96	76.825	ENSMMOG00000020767	qki2	98	76.899	Mola_mola
ENSRNOG00000048297	LOC108348175	99	77.231	ENSMMOG00000007933	qkib	93	77.231	Mola_mola
ENSRNOG00000048297	LOC108348175	100	98.512	ENSMODG00000006434	QKI	100	97.654	Monodelphis_domestica
ENSRNOG00000048297	LOC108348175	99	76.994	ENSMALG00000009475	qkib	93	76.994	Monopterus_albus
ENSRNOG00000048297	LOC108348175	96	77.143	ENSMALG00000015261	qki2	98	77.215	Monopterus_albus
ENSRNOG00000048297	LOC108348175	100	98.769	MGP_CAROLIEiJ_G0021057	Qk	100	98.769	Mus_caroli
ENSRNOG00000048297	LOC108348175	100	98.810	ENSMUSG00000062078	Qk	100	98.769	Mus_musculus
ENSRNOG00000048297	LOC108348175	100	98.810	MGP_PahariEiJ_G0023373	Qk	100	98.769	Mus_pahari
ENSRNOG00000048297	LOC108348175	100	98.769	MGP_SPRETEiJ_G0021963	Qk	100	98.769	Mus_spretus
ENSRNOG00000048297	LOC108348175	84	100.000	ENSMPUG00000006368	QKI	100	98.951	Mustela_putorius_furo
ENSRNOG00000048297	LOC108348175	89	98.316	ENSMLUG00000002829	QKI	98	98.316	Myotis_lucifugus
ENSRNOG00000048297	LOC108348175	86	99.306	ENSNGAG00000009989	Qk	100	98.917	Nannospalax_galili
ENSRNOG00000048297	LOC108348175	96	77.143	ENSNBRG00000007549	qki2	95	77.143	Neolamprologus_brichardi
ENSRNOG00000048297	LOC108348175	86	91.667	ENSNLEG00000011478	-	100	91.336	Nomascus_leucogenys
ENSRNOG00000048297	LOC108348175	81	88.213	ENSMEUG00000008112	QKI	90	88.213	Notamacropus_eugenii
ENSRNOG00000048297	LOC108348175	86	98.958	ENSOPRG00000011662	QKI	100	97.952	Ochotona_princeps
ENSRNOG00000048297	LOC108348175	100	98.810	ENSODEG00000007408	QKI	100	98.769	Octodon_degus
ENSRNOG00000048297	LOC108348175	96	79.365	ENSONIG00000007133	qkib	96	79.430	Oreochromis_niloticus
ENSRNOG00000048297	LOC108348175	100	76.833	ENSONIG00000008011	qki2	100	76.590	Oreochromis_niloticus
ENSRNOG00000048297	LOC108348175	87	97.872	ENSOANG00000011161	QKI	98	97.872	Ornithorhynchus_anatinus
ENSRNOG00000048297	LOC108348175	99	90.179	ENSOCUG00000004117	-	97	95.946	Oryctolagus_cuniculus
ENSRNOG00000048297	LOC108348175	100	76.540	ENSORLG00000027996	qki2	99	76.562	Oryzias_latipes
ENSRNOG00000048297	LOC108348175	100	74.785	ENSOMEG00000007147	qki2	98	76.899	Oryzias_melastigma
ENSRNOG00000048297	LOC108348175	100	98.810	ENSOGAG00000003634	QKI	100	97.947	Otolemur_garnettii
ENSRNOG00000048297	LOC108348175	91	96.753	ENSOARG00000004811	QKI	97	100.000	Ovis_aries
ENSRNOG00000048297	LOC108348175	91	96.429	ENSPPAG00000038059	-	100	100.000	Pan_paniscus
ENSRNOG00000048297	LOC108348175	100	98.512	ENSPPRG00000013383	QKI	100	98.462	Panthera_pardus
ENSRNOG00000048297	LOC108348175	86	99.653	ENSPTIG00000008797	QKI	85	99.639	Panthera_tigris_altaica
ENSRNOG00000048297	LOC108348175	100	98.810	ENSPTRG00000018785	QKI	100	98.769	Pan_troglodytes
ENSRNOG00000048297	LOC108348175	100	98.810	ENSPANG00000006711	-	100	98.769	Papio_anubis
ENSRNOG00000048297	LOC108348175	96	82.051	ENSPKIG00000002778	-	98	82.109	Paramormyrops_kingsleyae
ENSRNOG00000048297	LOC108348175	100	85.044	ENSPKIG00000010813	qki2	100	84.150	Paramormyrops_kingsleyae
ENSRNOG00000048297	LOC108348175	100	98.512	ENSPSIG00000012197	QKI	100	97.654	Pelodiscus_sinensis
ENSRNOG00000048297	LOC108348175	96	73.457	ENSPMGG00000010555	-	96	73.538	Periophthalmus_magnuspinnatus
ENSRNOG00000048297	LOC108348175	92	96.117	ENSPEMG00000007765	Qk	100	100.000	Peromyscus_maniculatus_bairdii
ENSRNOG00000048297	LOC108348175	100	98.512	ENSPCIG00000020191	QKI	100	98.462	Phascolarctos_cinereus
ENSRNOG00000048297	LOC108348175	100	75.645	ENSPFOG00000014078	qki2	98	75.645	Poecilia_formosa
ENSRNOG00000048297	LOC108348175	96	77.460	ENSPLAG00000020354	qki2	98	77.532	Poecilia_latipinna
ENSRNOG00000048297	LOC108348175	100	77.419	ENSPMEG00000004997	qki2	98	77.419	Poecilia_mexicana
ENSRNOG00000048297	LOC108348175	100	76.833	ENSPREG00000009154	qki2	98	77.215	Poecilia_reticulata
ENSRNOG00000048297	LOC108348175	99	96.677	ENSPPYG00000017160	QKI	100	95.833	Pongo_abelii
ENSRNOG00000048297	LOC108348175	86	82.639	ENSPVAG00000015228	QKI	100	81.911	Pteropus_vampyrus
ENSRNOG00000048297	LOC108348175	96	76.825	ENSPNYG00000004751	qki2	95	76.825	Pundamilia_nyererei
ENSRNOG00000048297	LOC108348175	82	93.309	ENSPNAG00000002418	qkib	80	93.333	Pygocentrus_nattereri
ENSRNOG00000048297	LOC108348175	96	89.744	ENSPNAG00000026483	qki2	98	89.776	Pygocentrus_nattereri
ENSRNOG00000048297	LOC108348175	91	96.429	ENSRBIG00000043656	QKI	100	100.000	Rhinopithecus_bieti
ENSRNOG00000048297	LOC108348175	86	100.000	ENSRROG00000040592	QKI	100	97.037	Rhinopithecus_roxellana
ENSRNOG00000048297	LOC108348175	86	99.278	ENSSBOG00000036267	QKI	100	99.278	Saimiri_boliviensis_boliviensis
ENSRNOG00000048297	LOC108348175	79	96.484	ENSSHAG00000014127	QKI	97	96.498	Sarcophilus_harrisii
ENSRNOG00000048297	LOC108348175	100	87.870	ENSSFOG00015003466	qki2	100	87.172	Scleropages_formosus
ENSRNOG00000048297	LOC108348175	96	94.212	ENSSFOG00015000145	qki	99	93.333	Scleropages_formosus
ENSRNOG00000048297	LOC108348175	100	75.367	ENSSMAG00000006070	qki2	99	75.312	Scophthalmus_maximus
ENSRNOG00000048297	LOC108348175	96	77.143	ENSSDUG00000013691	qki2	98	77.215	Seriola_dumerili
ENSRNOG00000048297	LOC108348175	99	73.538	ENSSDUG00000013229	qkib	93	73.538	Seriola_dumerili
ENSRNOG00000048297	LOC108348175	100	76.833	ENSSLDG00000017943	qki2	98	77.215	Seriola_lalandi_dorsalis
ENSRNOG00000048297	LOC108348175	86	99.653	ENSSARG00000010852	QKI	100	98.294	Sorex_araneus
ENSRNOG00000048297	LOC108348175	100	97.619	ENSSPUG00000012200	QKI	100	96.774	Sphenodon_punctatus
ENSRNOG00000048297	LOC108348175	100	77.059	ENSSPAG00000002875	qki2	98	77.215	Stegastes_partitus
ENSRNOG00000048297	LOC108348175	100	96.429	ENSSSCG00000004029	QKI	97	100.000	Sus_scrofa
ENSRNOG00000048297	LOC108348175	100	91.369	ENSTGUG00000009383	QKI	100	91.369	Taeniopygia_guttata
ENSRNOG00000048297	LOC108348175	100	76.246	ENSTRUG00000018041	qki2	98	76.582	Takifugu_rubripes
ENSRNOG00000048297	LOC108348175	100	76.833	ENSTNIG00000011099	qki2	99	76.901	Tetraodon_nigroviridis
ENSRNOG00000048297	LOC108348175	100	97.917	ENSTTRG00000012050	QKI	99	97.067	Tursiops_truncatus
ENSRNOG00000048297	LOC108348175	96	93.808	ENSUMAG00000011658	QKI	100	100.000	Ursus_maritimus
ENSRNOG00000048297	LOC108348175	86	100.000	ENSVPAG00000009566	QKI	100	98.976	Vicugna_pacos
ENSRNOG00000048297	LOC108348175	100	98.810	ENSVVUG00000001467	QKI	84	98.769	Vulpes_vulpes
ENSRNOG00000048297	LOC108348175	100	93.195	ENSXETG00000015705	qki	100	92.420	Xenopus_tropicalis
ENSRNOG00000048297	LOC108348175	96	71.385	ENSXCOG00000004131	qki2	95	71.385	Xiphophorus_couchianus
ENSRNOG00000048297	LOC108348175	100	77.126	ENSXMAG00000017056	qki2	98	77.126	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function