EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000048495 (Gene tree)
Gene ID: 679127
Gene Symbol: Rrp12
Alias: LOC679127
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 33630 bases
Position: chr1:261106760-261140389
Accession: 1591867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000063945	NUC173	PF08161.12	2.7e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000073193	-	4355	XM_003749118	ENSRNOP00000063945	1293 (aa)	XP_003749166	M0R3M8

Gene Model

Click here to download ENSRNOG00000048495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048495	Rrp12	100	89.291	ENSG00000052749	RRP12	100	95.312	Homo_sapiens
ENSRNOG00000048495	Rrp12	99	63.215	ENSAPOG00000013355	rrp12	99	63.085	Acanthochromis_polyacanthus
ENSRNOG00000048495	Rrp12	100	88.761	ENSAMEG00000000134	RRP12	100	88.992	Ailuropoda_melanoleuca
ENSRNOG00000048495	Rrp12	99	63.898	ENSACIG00000022673	rrp12	99	63.763	Amphilophus_citrinellus
ENSRNOG00000048495	Rrp12	99	64.313	ENSAOCG00000016149	rrp12	99	64.176	Amphiprion_ocellaris
ENSRNOG00000048495	Rrp12	99	63.622	ENSAPEG00000016023	rrp12	99	63.490	Amphiprion_percula
ENSRNOG00000048495	Rrp12	99	62.917	ENSATEG00000022627	rrp12	99	62.789	Anabas_testudineus
ENSRNOG00000048495	Rrp12	97	65.504	ENSAPLG00000014387	RRP12	100	65.900	Anas_platyrhynchos
ENSRNOG00000048495	Rrp12	99	65.331	ENSACAG00000002175	RRP12	99	65.512	Anolis_carolinensis
ENSRNOG00000048495	Rrp12	100	88.966	ENSANAG00000037485	RRP12	100	89.474	Aotus_nancymaae
ENSRNOG00000048495	Rrp12	99	62.995	ENSACLG00000007354	rrp12	99	63.097	Astatotilapia_calliptera
ENSRNOG00000048495	Rrp12	99	61.188	ENSAMXG00000012852	rrp12	99	61.515	Astyanax_mexicanus
ENSRNOG00000048495	Rrp12	100	89.214	ENSBTAG00000002191	RRP12	100	89.445	Bos_taurus
ENSRNOG00000048495	Rrp12	85	88.011	ENSCJAG00000016549	-	100	88.374	Callithrix_jacchus
ENSRNOG00000048495	Rrp12	100	88.769	ENSCAFG00000009043	RRP12	100	88.846	Canis_familiaris
ENSRNOG00000048495	Rrp12	100	88.769	ENSCAFG00020005991	RRP12	100	88.846	Canis_lupus_dingo
ENSRNOG00000048495	Rrp12	100	86.764	ENSCHIG00000011876	RRP12	100	86.840	Capra_hircus
ENSRNOG00000048495	Rrp12	54	83.548	ENSTSYG00000030210	-	100	84.120	Carlito_syrichta
ENSRNOG00000048495	Rrp12	96	81.986	ENSCAPG00000008991	RRP12	98	82.066	Cavia_aperea
ENSRNOG00000048495	Rrp12	99	90.031	ENSCPOG00000004215	RRP12	99	90.108	Cavia_porcellus
ENSRNOG00000048495	Rrp12	70	86.294	ENSCCAG00000033123	-	83	86.952	Cebus_capucinus
ENSRNOG00000048495	Rrp12	80	86.982	ENSCCAG00000024088	RRP12	100	90.443	Cebus_capucinus
ENSRNOG00000048495	Rrp12	100	83.552	ENSCATG00000045310	RRP12	100	83.707	Cercocebus_atys
ENSRNOG00000048495	Rrp12	99	89.567	ENSCLAG00000003753	RRP12	99	89.799	Chinchilla_lanigera
ENSRNOG00000048495	Rrp12	88	89.092	ENSCSAG00000005877	RRP12	100	89.442	Chlorocebus_sabaeus
ENSRNOG00000048495	Rrp12	59	92.308	ENSCHOG00000003095	-	61	92.308	Choloepus_hoffmanni
ENSRNOG00000048495	Rrp12	94	72.884	ENSCPBG00000011935	RRP12	97	73.131	Chrysemys_picta_bellii
ENSRNOG00000048495	Rrp12	64	39.508	ENSCSAVG00000006059	-	99	39.202	Ciona_savignyi
ENSRNOG00000048495	Rrp12	100	89.591	ENSCANG00000031653	RRP12	100	90.132	Colobus_angolensis_palliatus
ENSRNOG00000048495	Rrp12	90	94.108	ENSCGRG00001004338	Rrp12	100	94.108	Cricetulus_griseus_chok1gshd
ENSRNOG00000048495	Rrp12	100	92.890	ENSCGRG00000011965	Rrp12	100	92.890	Cricetulus_griseus_crigri
ENSRNOG00000048495	Rrp12	99	62.221	ENSCSEG00000007799	rrp12	99	62.404	Cynoglossus_semilaevis
ENSRNOG00000048495	Rrp12	99	64.286	ENSCVAG00000003418	rrp12	99	64.071	Cyprinodon_variegatus
ENSRNOG00000048495	Rrp12	99	61.081	ENSDARG00000022410	rrp12	99	61.640	Danio_rerio
ENSRNOG00000048495	Rrp12	99	86.723	ENSDNOG00000005120	RRP12	99	86.876	Dasypus_novemcinctus
ENSRNOG00000048495	Rrp12	99	89.969	ENSDORG00000009199	Rrp12	99	90.123	Dipodomys_ordii
ENSRNOG00000048495	Rrp12	93	74.596	ENSETEG00000002455	RRP12	93	74.776	Echinops_telfairi
ENSRNOG00000048495	Rrp12	83	57.895	ENSEBUG00000006555	rrp12	99	47.711	Eptatretus_burgeri
ENSRNOG00000048495	Rrp12	100	89.283	ENSEASG00005008693	RRP12	100	89.514	Equus_asinus_asinus
ENSRNOG00000048495	Rrp12	94	89.171	ENSECAG00000010892	RRP12	100	89.418	Equus_caballus
ENSRNOG00000048495	Rrp12	64	81.746	ENSEEUG00000005447	-	70	70.755	Erinaceus_europaeus
ENSRNOG00000048495	Rrp12	99	63.840	ENSELUG00000010510	rrp12	100	63.636	Esox_lucius
ENSRNOG00000048495	Rrp12	100	88.769	ENSFCAG00000028639	RRP12	100	90.132	Felis_catus
ENSRNOG00000048495	Rrp12	94	71.721	ENSFALG00000008458	RRP12	99	71.721	Ficedula_albicollis
ENSRNOG00000048495	Rrp12	99	89.104	ENSFDAG00000019108	RRP12	95	89.258	Fukomys_damarensis
ENSRNOG00000048495	Rrp12	99	58.152	ENSFHEG00000004148	rrp12	99	57.826	Fundulus_heteroclitus
ENSRNOG00000048495	Rrp12	99	58.057	ENSGMOG00000004188	rrp12	99	58.211	Gadus_morhua
ENSRNOG00000048495	Rrp12	100	69.892	ENSGALG00000041331	RRP12	96	71.295	Gallus_gallus
ENSRNOG00000048495	Rrp12	99	63.643	ENSGAFG00000009038	rrp12	99	63.377	Gambusia_affinis
ENSRNOG00000048495	Rrp12	99	61.133	ENSGACG00000007175	rrp12	99	60.709	Gasterosteus_aculeatus
ENSRNOG00000048495	Rrp12	67	74.942	ENSGAGG00000019169	RRP12	96	74.942	Gopherus_agassizii
ENSRNOG00000048495	Rrp12	100	89.522	ENSGGOG00000014850	RRP12	100	90.132	Gorilla_gorilla
ENSRNOG00000048495	Rrp12	99	63.150	ENSHBUG00000023527	rrp12	99	63.251	Haplochromis_burtoni
ENSRNOG00000048495	Rrp12	100	88.880	ENSHGLG00000016772	RRP12	99	89.035	Heterocephalus_glaber_female
ENSRNOG00000048495	Rrp12	100	88.880	ENSHGLG00100015110	RRP12	99	89.035	Heterocephalus_glaber_male
ENSRNOG00000048495	Rrp12	99	62.258	ENSHCOG00000019519	rrp12	99	62.181	Hippocampus_comes
ENSRNOG00000048495	Rrp12	99	61.034	ENSIPUG00000000311	RRP12	99	61.343	Ictalurus_punctatus
ENSRNOG00000048495	Rrp12	100	90.425	ENSSTOG00000006515	RRP12	100	90.656	Ictidomys_tridecemlineatus
ENSRNOG00000048495	Rrp12	96	90.778	ENSJJAG00000000110	Rrp12	99	90.778	Jaculus_jaculus
ENSRNOG00000048495	Rrp12	99	63.538	ENSKMAG00000020621	rrp12	99	63.482	Kryptolebias_marmoratus
ENSRNOG00000048495	Rrp12	99	61.206	ENSLBEG00000015335	rrp12	99	61.437	Labrus_bergylta
ENSRNOG00000048495	Rrp12	78	57.391	ENSLACG00000016633	RRP12	81	67.041	Latimeria_chalumnae
ENSRNOG00000048495	Rrp12	99	62.760	ENSLOCG00000003846	rrp12	99	62.760	Lepisosteus_oculatus
ENSRNOG00000048495	Rrp12	99	89.222	ENSLAFG00000015965	RRP12	99	89.453	Loxodonta_africana
ENSRNOG00000048495	Rrp12	100	89.668	ENSMFAG00000041558	RRP12	100	89.977	Macaca_fascicularis
ENSRNOG00000048495	Rrp12	100	89.668	ENSMMUG00000019634	RRP12	100	89.977	Macaca_mulatta
ENSRNOG00000048495	Rrp12	100	85.505	ENSMNEG00000036759	RRP12	100	89.474	Macaca_nemestrina
ENSRNOG00000048495	Rrp12	100	83.861	ENSMLEG00000041317	RRP12	100	90.132	Mandrillus_leucophaeus
ENSRNOG00000048495	Rrp12	99	62.305	ENSMAMG00000002964	rrp12	99	62.920	Mastacembelus_armatus
ENSRNOG00000048495	Rrp12	99	63.150	ENSMZEG00005003241	rrp12	99	63.251	Maylandia_zebra
ENSRNOG00000048495	Rrp12	100	68.712	ENSMGAG00000009829	RRP12	100	68.712	Meleagris_gallopavo
ENSRNOG00000048495	Rrp12	100	91.183	ENSMAUG00000020743	Rrp12	100	91.183	Mesocricetus_auratus
ENSRNOG00000048495	Rrp12	100	89.291	ENSMICG00000007624	RRP12	100	89.445	Microcebus_murinus
ENSRNOG00000048495	Rrp12	99	94.741	ENSMOCG00000006753	Rrp12	99	94.741	Microtus_ochrogaster
ENSRNOG00000048495	Rrp12	99	62.277	ENSMMOG00000010708	rrp12	99	62.277	Mola_mola
ENSRNOG00000048495	Rrp12	99	78.234	ENSMODG00000004315	RRP12	99	78.422	Monodelphis_domestica
ENSRNOG00000048495	Rrp12	99	60.279	ENSMALG00000016560	rrp12	99	63.453	Monopterus_albus
ENSRNOG00000048495	Rrp12	99	95.862	MGP_CAROLIEiJ_G0022957	Rrp12	99	95.862	Mus_caroli
ENSRNOG00000048495	Rrp12	99	96.520	ENSMUSG00000035049	Rrp12	99	96.520	Mus_musculus
ENSRNOG00000048495	Rrp12	99	96.520	MGP_PahariEiJ_G0014447	Rrp12	99	96.520	Mus_pahari
ENSRNOG00000048495	Rrp12	99	96.752	MGP_SPRETEiJ_G0023878	Rrp12	99	96.752	Mus_spretus
ENSRNOG00000048495	Rrp12	100	88.769	ENSMPUG00000017046	RRP12	100	88.769	Mustela_putorius_furo
ENSRNOG00000048495	Rrp12	100	89.316	ENSMLUG00000017160	RRP12	100	89.547	Myotis_lucifugus
ENSRNOG00000048495	Rrp12	99	92.343	ENSNGAG00000024144	Rrp12	99	92.575	Nannospalax_galili
ENSRNOG00000048495	Rrp12	99	62.655	ENSNBRG00000009987	rrp12	99	62.606	Neolamprologus_brichardi
ENSRNOG00000048495	Rrp12	92	90.132	ENSNLEG00000013762	RRP12	100	90.132	Nomascus_leucogenys
ENSRNOG00000048495	Rrp12	99	72.798	ENSMEUG00000003185	RRP12	99	72.643	Notamacropus_eugenii
ENSRNOG00000048495	Rrp12	94	85.437	ENSOPRG00000005001	RRP12	94	85.922	Ochotona_princeps
ENSRNOG00000048495	Rrp12	99	87.935	ENSODEG00000016439	RRP12	99	88.167	Octodon_degus
ENSRNOG00000048495	Rrp12	99	63.382	ENSONIG00000009528	rrp12	99	63.636	Oreochromis_niloticus
ENSRNOG00000048495	Rrp12	99	71.714	ENSOANG00000006560	RRP12	99	71.791	Ornithorhynchus_anatinus
ENSRNOG00000048495	Rrp12	100	89.043	ENSOCUG00000005662	RRP12	100	89.275	Oryctolagus_cuniculus
ENSRNOG00000048495	Rrp12	99	62.934	ENSORLG00000008688	rrp12	99	64.172	Oryzias_latipes
ENSRNOG00000048495	Rrp12	97	63.050	ENSORLG00020002355	rrp12	99	63.636	Oryzias_latipes_hni
ENSRNOG00000048495	Rrp12	99	63.665	ENSORLG00015006709	rrp12	99	63.608	Oryzias_latipes_hsok
ENSRNOG00000048495	Rrp12	97	64.060	ENSOMEG00000002609	rrp12	99	64.111	Oryzias_melastigma
ENSRNOG00000048495	Rrp12	99	87.942	ENSOGAG00000001626	RRP12	99	88.095	Otolemur_garnettii
ENSRNOG00000048495	Rrp12	100	87.923	ENSOARG00000009681	RRP12	100	88.154	Ovis_aries
ENSRNOG00000048495	Rrp12	97	89.022	ENSPPAG00000043885	RRP12	99	90.132	Pan_paniscus
ENSRNOG00000048495	Rrp12	100	88.692	ENSPPRG00000002029	RRP12	100	90.789	Panthera_pardus
ENSRNOG00000048495	Rrp12	97	87.960	ENSPTIG00000004428	RRP12	100	90.132	Panthera_tigris_altaica
ENSRNOG00000048495	Rrp12	97	89.114	ENSPTRG00000002806	RRP12	99	90.132	Pan_troglodytes
ENSRNOG00000048495	Rrp12	100	89.591	ENSPANG00000021360	RRP12	100	90.132	Papio_anubis
ENSRNOG00000048495	Rrp12	99	64.516	ENSPKIG00000016516	rrp12	99	64.516	Paramormyrops_kingsleyae
ENSRNOG00000048495	Rrp12	99	62.160	ENSPMGG00000020217	rrp12	99	61.960	Periophthalmus_magnuspinnatus
ENSRNOG00000048495	Rrp12	99	95.440	ENSPEMG00000008437	Rrp12	99	95.440	Peromyscus_maniculatus_bairdii
ENSRNOG00000048495	Rrp12	82	56.905	ENSPMAG00000007493	rrp12	82	56.905	Petromyzon_marinus
ENSRNOG00000048495	Rrp12	96	82.550	ENSPCIG00000002157	RRP12	100	77.958	Phascolarctos_cinereus
ENSRNOG00000048495	Rrp12	99	63.432	ENSPFOG00000014975	rrp12	99	63.069	Poecilia_formosa
ENSRNOG00000048495	Rrp12	99	63.199	ENSPLAG00000009840	rrp12	99	62.837	Poecilia_latipinna
ENSRNOG00000048495	Rrp12	99	63.587	ENSPMEG00000021871	rrp12	99	63.223	Poecilia_mexicana
ENSRNOG00000048495	Rrp12	99	62.742	ENSPREG00000020950	rrp12	99	62.250	Poecilia_reticulata
ENSRNOG00000048495	Rrp12	100	87.750	ENSPPYG00000002528	RRP12	100	88.136	Pongo_abelii
ENSRNOG00000048495	Rrp12	94	90.395	ENSPCAG00000008967	RRP12	94	90.395	Procavia_capensis
ENSRNOG00000048495	Rrp12	100	90.502	ENSPCOG00000014009	RRP12	100	90.502	Propithecus_coquereli
ENSRNOG00000048495	Rrp12	99	84.669	ENSPVAG00000003370	RRP12	100	85.054	Pteropus_vampyrus
ENSRNOG00000048495	Rrp12	99	63.305	ENSPNYG00000009451	rrp12	99	63.405	Pundamilia_nyererei
ENSRNOG00000048495	Rrp12	99	61.728	ENSPNAG00000007658	rrp12	99	62.037	Pygocentrus_nattereri
ENSRNOG00000048495	Rrp12	100	89.591	ENSRBIG00000021296	RRP12	100	90.132	Rhinopithecus_bieti
ENSRNOG00000048495	Rrp12	100	89.668	ENSRROG00000032482	RRP12	100	90.132	Rhinopithecus_roxellana
ENSRNOG00000048495	Rrp12	100	88.897	ENSSBOG00000030992	RRP12	100	89.052	Saimiri_boliviensis_boliviensis
ENSRNOG00000048495	Rrp12	99	77.238	ENSSHAG00000018275	RRP12	99	77.701	Sarcophilus_harrisii
ENSRNOG00000048495	Rrp12	99	63.867	ENSSFOG00015016400	rrp12	99	63.636	Scleropages_formosus
ENSRNOG00000048495	Rrp12	99	62.578	ENSSMAG00000004047	rrp12	99	62.789	Scophthalmus_maximus
ENSRNOG00000048495	Rrp12	99	63.382	ENSSDUG00000022871	rrp12	99	63.097	Seriola_dumerili
ENSRNOG00000048495	Rrp12	99	62.995	ENSSLDG00000003038	rrp12	99	62.866	Seriola_lalandi_dorsalis
ENSRNOG00000048495	Rrp12	99	68.534	ENSSPUG00000012221	RRP12	99	68.764	Sphenodon_punctatus
ENSRNOG00000048495	Rrp12	99	63.693	ENSSPAG00000002261	rrp12	99	63.482	Stegastes_partitus
ENSRNOG00000048495	Rrp12	99	89.445	ENSSSCG00000010514	RRP12	99	89.445	Sus_scrofa
ENSRNOG00000048495	Rrp12	89	68.963	ENSTGUG00000009711	RRP12	100	69.050	Taeniopygia_guttata
ENSRNOG00000048495	Rrp12	99	59.059	ENSTRUG00000012017	rrp12	99	59.014	Takifugu_rubripes
ENSRNOG00000048495	Rrp12	99	62.481	ENSTNIG00000016522	rrp12	99	62.481	Tetraodon_nigroviridis
ENSRNOG00000048495	Rrp12	77	90.291	ENSTBEG00000004907	RRP12	80	90.291	Tupaia_belangeri
ENSRNOG00000048495	Rrp12	99	85.428	ENSTTRG00000009878	RRP12	99	85.659	Tursiops_truncatus
ENSRNOG00000048495	Rrp12	100	89.008	ENSUAMG00000009092	RRP12	100	89.085	Ursus_americanus
ENSRNOG00000048495	Rrp12	100	86.518	ENSUMAG00000021621	RRP12	100	86.595	Ursus_maritimus
ENSRNOG00000048495	Rrp12	99	88.158	ENSVVUG00000023168	RRP12	100	88.099	Vulpes_vulpes
ENSRNOG00000048495	Rrp12	99	67.643	ENSXETG00000003430	rrp12	99	67.643	Xenopus_tropicalis
ENSRNOG00000048495	Rrp12	90	64.948	ENSXCOG00000012082	rrp12	99	61.295	Xiphophorus_couchianus
ENSRNOG00000048495	Rrp12	99	63.587	ENSXMAG00000013498	rrp12	99	63.300	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008150	biological_process	-	ND	Process