EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000048969 (Gene tree)
Gene ID: -
Gene Symbol: AABR07059041.1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 15921 bases
Position: chr4:2340148-2356068
Accession: 682058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065047	MA3	PF02847.17	1.5e-21	1	1
ENSRNOP00000065047	MIF4G	PF02854.19	9.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072890	AABR07059041.1-201	2430	XM_008762677	ENSRNOP00000065047	809 (aa)	-	M0R6J5

Gene Model

Click here to download ENSRNOG00000048969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048969	AABR07059041.1	99	66.667	ENSG00000146909	NOM1	95	68.313	Homo_sapiens
ENSRNOG00000048969	AABR07059041.1	64	64.231	ENSAPOG00000012073	nom1	97	51.882	Acanthochromis_polyacanthus
ENSRNOG00000048969	AABR07059041.1	86	67.039	ENSAMEG00000001412	NOM1	99	67.039	Ailuropoda_melanoleuca
ENSRNOG00000048969	AABR07059041.1	87	64.355	ENSACIG00000018050	nom1	97	52.840	Amphilophus_citrinellus
ENSRNOG00000048969	AABR07059041.1	64	63.006	ENSAOCG00000006229	nom1	97	49.471	Amphiprion_ocellaris
ENSRNOG00000048969	AABR07059041.1	64	63.006	ENSAPEG00000015994	nom1	97	49.588	Amphiprion_percula
ENSRNOG00000048969	AABR07059041.1	87	55.205	ENSATEG00000005405	nom1	97	52.404	Anabas_testudineus
ENSRNOG00000048969	AABR07059041.1	80	59.724	ENSAPLG00000006585	NOM1	99	59.724	Anas_platyrhynchos
ENSRNOG00000048969	AABR07059041.1	84	55.769	ENSACAG00000011192	NOM1	97	53.621	Anolis_carolinensis
ENSRNOG00000048969	AABR07059041.1	64	63.198	ENSACLG00000000033	nom1	97	51.149	Astatotilapia_calliptera
ENSRNOG00000048969	AABR07059041.1	64	61.036	ENSAMXG00000041486	nom1	98	48.308	Astyanax_mexicanus
ENSRNOG00000048969	AABR07059041.1	99	59.806	ENSBTAG00000016435	NOM1	95	60.337	Bos_taurus
ENSRNOG00000048969	AABR07059041.1	99	64.976	ENSCJAG00000004336	NOM1	95	66.184	Callithrix_jacchus
ENSRNOG00000048969	AABR07059041.1	100	64.183	ENSCAFG00020005121	NOM1	96	63.832	Canis_lupus_dingo
ENSRNOG00000048969	AABR07059041.1	95	61.323	ENSCHIG00000020102	NOM1	95	60.822	Capra_hircus
ENSRNOG00000048969	AABR07059041.1	99	68.505	ENSTSYG00000000227	NOM1	95	68.248	Carlito_syrichta
ENSRNOG00000048969	AABR07059041.1	64	78.394	ENSCAPG00000016273	NOM1	100	78.394	Cavia_aperea
ENSRNOG00000048969	AABR07059041.1	99	65.693	ENSCPOG00000025538	NOM1	97	65.580	Cavia_porcellus
ENSRNOG00000048969	AABR07059041.1	91	74.764	ENSCCAG00000014944	NOM1	100	73.034	Cebus_capucinus
ENSRNOG00000048969	AABR07059041.1	86	67.842	ENSCLAG00000000267	NOM1	86	67.619	Chinchilla_lanigera
ENSRNOG00000048969	AABR07059041.1	64	69.231	ENSCPBG00000018215	NOM1	88	56.501	Chrysemys_picta_bellii
ENSRNOG00000048969	AABR07059041.1	89	33.200	ENSCING00000005248	-	99	33.907	Ciona_intestinalis
ENSRNOG00000048969	AABR07059041.1	71	71.698	ENSCANG00000041984	NOM1	99	71.698	Colobus_angolensis_palliatus
ENSRNOG00000048969	AABR07059041.1	83	80.673	ENSCGRG00001020293	Nom1	96	77.657	Cricetulus_griseus_chok1gshd
ENSRNOG00000048969	AABR07059041.1	66	83.835	ENSCGRG00000005405	Nom1	100	83.835	Cricetulus_griseus_crigri
ENSRNOG00000048969	AABR07059041.1	78	54.747	ENSCSEG00000000932	nom1	94	50.439	Cynoglossus_semilaevis
ENSRNOG00000048969	AABR07059041.1	99	51.087	ENSCVAG00000007562	nom1	97	50.719	Cyprinodon_variegatus
ENSRNOG00000048969	AABR07059041.1	99	50.672	ENSDARG00000060027	nom1	99	61.954	Danio_rerio
ENSRNOG00000048969	AABR07059041.1	84	61.449	ENSDORG00000015682	Nom1	100	60.377	Dipodomys_ordii
ENSRNOG00000048969	AABR07059041.1	61	36.276	FBgn0035336	CG9004	78	33.764	Drosophila_melanogaster
ENSRNOG00000048969	AABR07059041.1	100	53.228	ENSETEG00000003104	NOM1	96	53.593	Echinops_telfairi
ENSRNOG00000048969	AABR07059041.1	53	46.636	ENSEBUG00000010077	nom1	95	46.636	Eptatretus_burgeri
ENSRNOG00000048969	AABR07059041.1	85	71.777	ENSEASG00005001489	NOM1	96	68.408	Equus_asinus_asinus
ENSRNOG00000048969	AABR07059041.1	99	65.912	ENSECAG00000007596	NOM1	90	68.214	Equus_caballus
ENSRNOG00000048969	AABR07059041.1	64	63.027	ENSELUG00000006266	nom1	98	49.761	Esox_lucius
ENSRNOG00000048969	AABR07059041.1	100	62.530	ENSFCAG00000006467	NOM1	96	63.012	Felis_catus
ENSRNOG00000048969	AABR07059041.1	84	58.916	ENSFALG00000006904	NOM1	99	60.231	Ficedula_albicollis
ENSRNOG00000048969	AABR07059041.1	100	67.073	ENSFDAG00000016241	NOM1	98	67.561	Fukomys_damarensis
ENSRNOG00000048969	AABR07059041.1	64	62.428	ENSFHEG00000015974	nom1	97	51.834	Fundulus_heteroclitus
ENSRNOG00000048969	AABR07059041.1	83	51.571	ENSGMOG00000005129	nom1	99	48.886	Gadus_morhua
ENSRNOG00000048969	AABR07059041.1	86	60.114	ENSGALG00000006437	NOM1	91	55.636	Gallus_gallus
ENSRNOG00000048969	AABR07059041.1	64	61.657	ENSGAFG00000003211	nom1	97	50.363	Gambusia_affinis
ENSRNOG00000048969	AABR07059041.1	86	61.790	ENSGAGG00000014347	NOM1	96	57.283	Gopherus_agassizii
ENSRNOG00000048969	AABR07059041.1	99	66.787	ENSGGOG00000010920	NOM1	88	68.357	Gorilla_gorilla
ENSRNOG00000048969	AABR07059041.1	64	63.006	ENSHBUG00000014616	nom1	97	51.582	Haplochromis_burtoni
ENSRNOG00000048969	AABR07059041.1	100	68.128	ENSHGLG00000007392	NOM1	97	67.654	Heterocephalus_glaber_female
ENSRNOG00000048969	AABR07059041.1	100	68.128	ENSHGLG00100014407	NOM1	96	74.684	Heterocephalus_glaber_male
ENSRNOG00000048969	AABR07059041.1	65	60.381	ENSIPUG00000013980	nom1	98	49.880	Ictalurus_punctatus
ENSRNOG00000048969	AABR07059041.1	70	77.368	ENSSTOG00000031736	NOM1	99	77.368	Ictidomys_tridecemlineatus
ENSRNOG00000048969	AABR07059041.1	60	79.959	ENSJJAG00000011716	Nom1	99	79.959	Jaculus_jaculus
ENSRNOG00000048969	AABR07059041.1	99	52.906	ENSLACG00000011777	NOM1	97	51.773	Latimeria_chalumnae
ENSRNOG00000048969	AABR07059041.1	99	53.497	ENSLOCG00000012452	nom1	99	53.611	Lepisosteus_oculatus
ENSRNOG00000048969	AABR07059041.1	100	59.515	ENSLAFG00000007119	NOM1	98	59.758	Loxodonta_africana
ENSRNOG00000048969	AABR07059041.1	99	64.252	ENSMMUG00000039033	NOM1	95	65.431	Macaca_mulatta
ENSRNOG00000048969	AABR07059041.1	65	76.515	ENSMLEG00000037062	NOM1	99	76.515	Mandrillus_leucophaeus
ENSRNOG00000048969	AABR07059041.1	99	50.180	ENSMAMG00000004118	nom1	97	50.180	Mastacembelus_armatus
ENSRNOG00000048969	AABR07059041.1	64	63.198	ENSMZEG00005000384	nom1	97	51.149	Maylandia_zebra
ENSRNOG00000048969	AABR07059041.1	84	59.828	ENSMGAG00000005051	NOM1	99	60.345	Meleagris_gallopavo
ENSRNOG00000048969	AABR07059041.1	99	77.491	ENSMAUG00000017988	Nom1	96	78.773	Mesocricetus_auratus
ENSRNOG00000048969	AABR07059041.1	99	66.585	ENSMICG00000017531	NOM1	96	67.597	Microcebus_murinus
ENSRNOG00000048969	AABR07059041.1	100	79.115	ENSMOCG00000015962	Nom1	96	80.000	Microtus_ochrogaster
ENSRNOG00000048969	AABR07059041.1	99	48.135	ENSMMOG00000004419	nom1	96	48.558	Mola_mola
ENSRNOG00000048969	AABR07059041.1	100	60.656	ENSMODG00000005177	NOM1	99	61.702	Monodelphis_domestica
ENSRNOG00000048969	AABR07059041.1	94	49.434	ENSMALG00000008800	nom1	97	50.128	Monopterus_albus
ENSRNOG00000048969	AABR07059041.1	100	86.084	MGP_CAROLIEiJ_G0027043	Nom1	95	86.084	Mus_caroli
ENSRNOG00000048969	AABR07059041.1	100	86.084	ENSMUSG00000001569	Nom1	95	86.084	Mus_musculus
ENSRNOG00000048969	AABR07059041.1	100	85.504	MGP_SPRETEiJ_G0028039	Nom1	95	85.504	Mus_spretus
ENSRNOG00000048969	AABR07059041.1	83	64.327	ENSMPUG00000009745	NOM1	100	63.559	Mustela_putorius_furo
ENSRNOG00000048969	AABR07059041.1	73	70.017	ENSMLUG00000009129	NOM1	98	70.389	Myotis_lucifugus
ENSRNOG00000048969	AABR07059041.1	99	51.640	ENSNBRG00000016429	nom1	93	63.006	Neolamprologus_brichardi
ENSRNOG00000048969	AABR07059041.1	99	65.793	ENSNLEG00000000238	NOM1	95	66.507	Nomascus_leucogenys
ENSRNOG00000048969	AABR07059041.1	88	64.835	ENSMEUG00000001108	NOM1	86	64.835	Notamacropus_eugenii
ENSRNOG00000048969	AABR07059041.1	88	59.420	ENSOPRG00000014676	NOM1	84	59.420	Ochotona_princeps
ENSRNOG00000048969	AABR07059041.1	85	70.228	ENSODEG00000009399	NOM1	100	71.286	Octodon_degus
ENSRNOG00000048969	AABR07059041.1	64	62.620	ENSONIG00000005958	nom1	99	52.075	Oreochromis_niloticus
ENSRNOG00000048969	AABR07059041.1	57	70.000	ENSOANG00000006139	-	97	70.000	Ornithorhynchus_anatinus
ENSRNOG00000048969	AABR07059041.1	100	68.644	ENSOCUG00000004071	-	95	69.380	Oryctolagus_cuniculus
ENSRNOG00000048969	AABR07059041.1	97	56.730	ENSOCUG00000021448	-	100	56.642	Oryctolagus_cuniculus
ENSRNOG00000048969	AABR07059041.1	82	54.427	ENSORLG00000010541	nom1	98	50.780	Oryzias_latipes
ENSRNOG00000048969	AABR07059041.1	82	54.862	ENSORLG00020010789	nom1	98	53.183	Oryzias_latipes_hni
ENSRNOG00000048969	AABR07059041.1	82	54.862	ENSORLG00015010475	nom1	98	53.183	Oryzias_latipes_hsok
ENSRNOG00000048969	AABR07059041.1	63	63.851	ENSOMEG00000004219	nom1	97	50.898	Oryzias_melastigma
ENSRNOG00000048969	AABR07059041.1	73	72.373	ENSOGAG00000001124	NOM1	95	73.057	Otolemur_garnettii
ENSRNOG00000048969	AABR07059041.1	83	65.205	ENSOARG00000007261	NOM1	99	63.563	Ovis_aries
ENSRNOG00000048969	AABR07059041.1	99	66.031	ENSPPAG00000041374	NOM1	95	68.478	Pan_paniscus
ENSRNOG00000048969	AABR07059041.1	87	65.651	ENSPTIG00000013532	NOM1	98	66.066	Panthera_tigris_altaica
ENSRNOG00000048969	AABR07059041.1	99	66.150	ENSPTRG00000019917	NOM1	95	68.242	Pan_troglodytes
ENSRNOG00000048969	AABR07059041.1	99	67.182	ENSPANG00000007605	NOM1	95	68.144	Papio_anubis
ENSRNOG00000048969	AABR07059041.1	99	48.489	ENSPKIG00000005825	nom1	97	48.356	Paramormyrops_kingsleyae
ENSRNOG00000048969	AABR07059041.1	65	69.623	ENSPSIG00000017848	NOM1	98	64.686	Pelodiscus_sinensis
ENSRNOG00000048969	AABR07059041.1	99	50.610	ENSPMGG00000002577	nom1	97	51.716	Periophthalmus_magnuspinnatus
ENSRNOG00000048969	AABR07059041.1	99	79.927	ENSPEMG00000024180	Nom1	95	80.708	Peromyscus_maniculatus_bairdii
ENSRNOG00000048969	AABR07059041.1	100	59.285	ENSPCIG00000027941	NOM1	95	60.279	Phascolarctos_cinereus
ENSRNOG00000048969	AABR07059041.1	64	63.148	ENSPFOG00000015771	nom1	98	51.683	Poecilia_formosa
ENSRNOG00000048969	AABR07059041.1	64	63.148	ENSPLAG00000007856	nom1	97	51.770	Poecilia_latipinna
ENSRNOG00000048969	AABR07059041.1	64	62.764	ENSPMEG00000014155	nom1	97	51.902	Poecilia_mexicana
ENSRNOG00000048969	AABR07059041.1	99	51.523	ENSPREG00000008850	nom1	97	51.285	Poecilia_reticulata
ENSRNOG00000048969	AABR07059041.1	99	63.669	ENSPPYG00000018222	NOM1	95	64.734	Pongo_abelii
ENSRNOG00000048969	AABR07059041.1	80	65.967	ENSPCAG00000000440	NOM1	96	55.512	Procavia_capensis
ENSRNOG00000048969	AABR07059041.1	65	75.568	ENSPCOG00000015222	NOM1	99	75.568	Propithecus_coquereli
ENSRNOG00000048969	AABR07059041.1	100	63.745	ENSPVAG00000014760	NOM1	95	64.294	Pteropus_vampyrus
ENSRNOG00000048969	AABR07059041.1	64	62.620	ENSPNYG00000006975	nom1	93	62.428	Pundamilia_nyererei
ENSRNOG00000048969	AABR07059041.1	64	60.577	ENSPNAG00000011085	nom1	79	53.125	Pygocentrus_nattereri
ENSRNOG00000048969	AABR07059041.1	99	66.985	ENSRBIG00000037042	NOM1	95	67.947	Rhinopithecus_bieti
ENSRNOG00000048969	AABR07059041.1	99	66.746	ENSRROG00000037293	NOM1	95	67.707	Rhinopithecus_roxellana
ENSRNOG00000048969	AABR07059041.1	51	65.693	ENSSHAG00000002835	-	99	66.423	Sarcophilus_harrisii
ENSRNOG00000048969	AABR07059041.1	83	67.254	ENSSHAG00000017998	-	100	67.241	Sarcophilus_harrisii
ENSRNOG00000048969	AABR07059041.1	59	60.125	ENSSFOG00015003196	nom1	99	60.125	Scleropages_formosus
ENSRNOG00000048969	AABR07059041.1	99	50.120	ENSSMAG00000011047	nom1	98	49.684	Scophthalmus_maximus
ENSRNOG00000048969	AABR07059041.1	64	64.547	ENSSDUG00000006834	nom1	97	51.617	Seriola_dumerili
ENSRNOG00000048969	AABR07059041.1	64	64.740	ENSSLDG00000021812	nom1	97	51.202	Seriola_lalandi_dorsalis
ENSRNOG00000048969	AABR07059041.1	86	51.913	ENSSPUG00000002556	NOM1	86	75.410	Sphenodon_punctatus
ENSRNOG00000048969	AABR07059041.1	92	63.584	ENSSPAG00000000953	nom1	97	50.824	Stegastes_partitus
ENSRNOG00000048969	AABR07059041.1	89	57.259	ENSTGUG00000000702	-	99	59.344	Taeniopygia_guttata
ENSRNOG00000048969	AABR07059041.1	65	62.075	ENSTRUG00000010239	nom1	97	50.732	Takifugu_rubripes
ENSRNOG00000048969	AABR07059041.1	99	49.939	ENSTNIG00000012783	nom1	99	50.437	Tetraodon_nigroviridis
ENSRNOG00000048969	AABR07059041.1	99	64.684	ENSTTRG00000009691	NOM1	96	65.291	Tursiops_truncatus
ENSRNOG00000048969	AABR07059041.1	100	62.545	ENSUAMG00000025450	NOM1	96	63.290	Ursus_americanus
ENSRNOG00000048969	AABR07059041.1	91	64.947	ENSUMAG00000014275	NOM1	100	66.620	Ursus_maritimus
ENSRNOG00000048969	AABR07059041.1	100	62.635	ENSVVUG00000002608	NOM1	96	63.701	Vulpes_vulpes
ENSRNOG00000048969	AABR07059041.1	91	53.403	ENSXETG00000021611	nom1	82	75.610	Xenopus_tropicalis
ENSRNOG00000048969	AABR07059041.1	99	50.914	ENSXMAG00000002451	nom1	97	51.217	Xiphophorus_maculatus