EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000048989 (Gene tree)
Gene ID: 686883
Gene Symbol: Larp7
Alias: LOC686883
Full Name: La ribonucleoprotein domain family%2C member 7
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 14805 bases
Position: chr2:231867135-231881939
Accession: 1592474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065357	RRM_1	PF00076.22	1.1e-18	1	1
ENSRNOP00000067115	RRM_1	PF00076.22	3.1e-17	1	1
ENSRNOP00000065357	RRM_3	PF08777.11	3.9e-29	1	1
ENSRNOP00000065357	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000073860	-	1710	-	ENSRNOP00000065357	570 (aa)	-	M0R7D1
ENSRNOT00000074644	-	1437	-	ENSRNOP00000067115	389 (aa)	-	M0RC12

Gene Model

Click here to download ENSRNOG00000048989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048989's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048989	Larp7	96	80.322	ENSG00000174720	LARP7	90	85.556	Homo_sapiens
ENSRNOG00000048989	Larp7	100	78.291	ENSAMEG00000015642	LARP7	95	79.640	Ailuropoda_melanoleuca
ENSRNOG00000048989	Larp7	98	55.459	ENSATEG00000016238	larp7	95	55.835	Anabas_testudineus
ENSRNOG00000048989	Larp7	99	67.388	ENSAPLG00000012887	LARP7	94	66.084	Anas_platyrhynchos
ENSRNOG00000048989	Larp7	99	65.195	ENSACAG00000010662	LARP7	91	65.893	Anolis_carolinensis
ENSRNOG00000048989	Larp7	99	78.086	ENSANAG00000031139	-	95	79.174	Aotus_nancymaae
ENSRNOG00000048989	Larp7	96	64.758	ENSANAG00000022318	-	94	64.771	Aotus_nancymaae
ENSRNOG00000048989	Larp7	98	54.754	ENSACLG00000023184	larp7	95	54.219	Astatotilapia_calliptera
ENSRNOG00000048989	Larp7	99	52.487	ENSAMXG00000002549	larp7	94	51.792	Astyanax_mexicanus
ENSRNOG00000048989	Larp7	100	77.530	ENSBTAG00000009632	LARP7	95	77.960	Bos_taurus
ENSRNOG00000048989	Larp7	96	81.004	ENSCJAG00000003711	LARP7	95	80.901	Callithrix_jacchus
ENSRNOG00000048989	Larp7	96	78.253	ENSCAFG00000011715	LARP7	95	78.136	Canis_familiaris
ENSRNOG00000048989	Larp7	96	79.391	ENSCAFG00020017225	LARP7	95	79.279	Canis_lupus_dingo
ENSRNOG00000048989	Larp7	96	79.391	ENSCHIG00000014163	-	95	79.279	Capra_hircus
ENSRNOG00000048989	Larp7	100	67.365	ENSCHIG00000013971	-	88	90.099	Capra_hircus
ENSRNOG00000048989	Larp7	99	69.409	ENSTSYG00000035188	-	97	71.898	Carlito_syrichta
ENSRNOG00000048989	Larp7	99	77.722	ENSTSYG00000006769	-	95	80.309	Carlito_syrichta
ENSRNOG00000048989	Larp7	100	70.957	ENSCAPG00000009328	LARP7	95	70.674	Cavia_aperea
ENSRNOG00000048989	Larp7	100	79.478	ENSCPOG00000011830	LARP7	95	79.781	Cavia_porcellus
ENSRNOG00000048989	Larp7	96	80.893	ENSCCAG00000026787	-	95	80.790	Cebus_capucinus
ENSRNOG00000048989	Larp7	96	73.945	ENSCCAG00000023563	-	100	73.945	Cebus_capucinus
ENSRNOG00000048989	Larp7	96	80.287	ENSCATG00000043535	LARP7	95	80.180	Cercocebus_atys
ENSRNOG00000048989	Larp7	100	81.359	ENSCLAG00000005894	LARP7	95	82.117	Chinchilla_lanigera
ENSRNOG00000048989	Larp7	96	80.466	ENSCSAG00000003810	LARP7	95	80.360	Chlorocebus_sabaeus
ENSRNOG00000048989	Larp7	93	71.455	ENSCHOG00000008967	-	100	70.902	Choloepus_hoffmanni
ENSRNOG00000048989	Larp7	100	77.625	ENSCHOG00000002379	-	95	78.300	Choloepus_hoffmanni
ENSRNOG00000048989	Larp7	98	67.637	ENSCPBG00000004919	LARP7	96	68.728	Chrysemys_picta_bellii
ENSRNOG00000048989	Larp7	67	36.970	ENSCING00000021685	-	74	36.478	Ciona_intestinalis
ENSRNOG00000048989	Larp7	96	80.322	ENSCANG00000031482	LARP7	94	80.216	Colobus_angolensis_palliatus
ENSRNOG00000048989	Larp7	100	75.385	ENSCGRG00001012747	-	99	77.713	Cricetulus_griseus_chok1gshd
ENSRNOG00000048989	Larp7	100	89.336	ENSCGRG00001025050	-	100	88.792	Cricetulus_griseus_chok1gshd
ENSRNOG00000048989	Larp7	100	87.179	ENSCGRG00000001141	-	100	80.952	Cricetulus_griseus_crigri
ENSRNOG00000048989	Larp7	100	75.897	ENSCGRG00000007642	-	99	78.976	Cricetulus_griseus_crigri
ENSRNOG00000048989	Larp7	96	52.973	ENSCVAG00000016852	larp7	78	73.889	Cyprinodon_variegatus
ENSRNOG00000048989	Larp7	100	77.342	ENSDNOG00000013761	LARP7	95	79.032	Dasypus_novemcinctus
ENSRNOG00000048989	Larp7	96	83.212	ENSDORG00000008896	-	95	82.246	Dipodomys_ordii
ENSRNOG00000048989	Larp7	100	74.658	ENSETEG00000011692	LARP7	95	75.271	Echinops_telfairi
ENSRNOG00000048989	Larp7	100	78.803	ENSEASG00005005592	LARP7	95	80.180	Equus_asinus_asinus
ENSRNOG00000048989	Larp7	100	78.974	ENSECAG00000000834	LARP7	95	80.360	Equus_caballus
ENSRNOG00000048989	Larp7	99	73.590	ENSEEUG00000012824	LARP7	95	76.908	Erinaceus_europaeus
ENSRNOG00000048989	Larp7	98	52.226	ENSELUG00000015341	larp7	88	75.138	Esox_lucius
ENSRNOG00000048989	Larp7	96	79.749	ENSFCAG00000031966	LARP7	95	79.640	Felis_catus
ENSRNOG00000048989	Larp7	99	68.528	ENSFALG00000000972	LARP7	92	68.861	Ficedula_albicollis
ENSRNOG00000048989	Larp7	96	80.616	ENSFDAG00000014048	-	95	80.510	Fukomys_damarensis
ENSRNOG00000048989	Larp7	100	73.448	ENSFDAG00000011855	-	100	73.448	Fukomys_damarensis
ENSRNOG00000048989	Larp7	99	68.456	ENSGALG00000012048	LARP7	94	66.903	Gallus_gallus
ENSRNOG00000048989	Larp7	96	52.705	ENSGACG00000019618	larp7	79	71.111	Gasterosteus_aculeatus
ENSRNOG00000048989	Larp7	99	66.387	ENSGAGG00000024520	LARP7	95	68.134	Gopherus_agassizii
ENSRNOG00000048989	Larp7	99	75.505	ENSGGOG00000006438	-	97	76.621	Gorilla_gorilla
ENSRNOG00000048989	Larp7	96	80.322	ENSGGOG00000023567	-	95	80.216	Gorilla_gorilla
ENSRNOG00000048989	Larp7	98	54.930	ENSHBUG00000019223	larp7	95	54.399	Haplochromis_burtoni
ENSRNOG00000048989	Larp7	96	79.428	ENSHGLG00000002716	LARP7	95	79.317	Heterocephalus_glaber_female
ENSRNOG00000048989	Larp7	96	79.428	ENSHGLG00100000332	LARP7	95	79.317	Heterocephalus_glaber_male
ENSRNOG00000048989	Larp7	100	80.617	ENSSTOG00000011789	LARP7	100	81.990	Ictidomys_tridecemlineatus
ENSRNOG00000048989	Larp7	100	82.180	ENSJJAG00000000257	-	100	82.526	Jaculus_jaculus
ENSRNOG00000048989	Larp7	97	51.652	ENSKMAG00000005057	larp7	95	51.064	Kryptolebias_marmoratus
ENSRNOG00000048989	Larp7	99	56.954	ENSLACG00000013744	LARP7	95	56.947	Latimeria_chalumnae
ENSRNOG00000048989	Larp7	96	48.199	ENSLOCG00000011608	larp7	95	47.314	Lepisosteus_oculatus
ENSRNOG00000048989	Larp7	100	80.034	ENSLAFG00000015769	LARP7	95	81.488	Loxodonta_africana
ENSRNOG00000048989	Larp7	100	78.803	ENSMFAG00000036506	LARP7	95	80.180	Macaca_fascicularis
ENSRNOG00000048989	Larp7	96	80.287	ENSMMUG00000017911	LARP7	95	80.180	Macaca_mulatta
ENSRNOG00000048989	Larp7	96	80.466	ENSMNEG00000034758	LARP7	100	78.458	Macaca_nemestrina
ENSRNOG00000048989	Larp7	96	80.466	ENSMLEG00000026154	LARP7	95	80.360	Mandrillus_leucophaeus
ENSRNOG00000048989	Larp7	98	54.754	ENSMZEG00005002084	larp7	95	54.219	Maylandia_zebra
ENSRNOG00000048989	Larp7	99	69.019	ENSMGAG00000010947	LARP7	95	69.620	Meleagris_gallopavo
ENSRNOG00000048989	Larp7	100	77.778	ENSMAUG00000005625	-	100	73.264	Mesocricetus_auratus
ENSRNOG00000048989	Larp7	96	81.720	ENSMICG00000031035	LARP7	95	81.261	Microcebus_murinus
ENSRNOG00000048989	Larp7	100	89.217	ENSMOCG00000012519	-	100	88.174	Microtus_ochrogaster
ENSRNOG00000048989	Larp7	100	85.604	ENSMOCG00000015761	-	100	85.098	Microtus_ochrogaster
ENSRNOG00000048989	Larp7	99	71.164	ENSMODG00000005669	LARP7	95	71.581	Monodelphis_domestica
ENSRNOG00000048989	Larp7	100	92.308	MGP_CAROLIEiJ_G0025613	-	100	91.972	Mus_caroli
ENSRNOG00000048989	Larp7	100	93.333	ENSMUSG00000027968	Larp7	100	97.531	Mus_musculus
ENSRNOG00000048989	Larp7	65	92.520	ENSMUSG00000066107	Gm12666	100	92.520	Mus_musculus
ENSRNOG00000048989	Larp7	100	92.308	MGP_PahariEiJ_G0027060	-	100	91.972	Mus_pahari
ENSRNOG00000048989	Larp7	100	92.839	MGP_SPRETEiJ_G0026566	Larp7	100	92.334	Mus_spretus
ENSRNOG00000048989	Larp7	96	79.964	ENSMPUG00000008331	-	95	79.820	Mustela_putorius_furo
ENSRNOG00000048989	Larp7	95	78.085	ENSMPUG00000018052	-	100	77.164	Mustela_putorius_furo
ENSRNOG00000048989	Larp7	99	72.405	ENSMLUG00000027214	LARP7	100	72.222	Myotis_lucifugus
ENSRNOG00000048989	Larp7	100	81.100	ENSNGAG00000007368	-	100	81.787	Nannospalax_galili
ENSRNOG00000048989	Larp7	96	80.466	ENSNLEG00000016354	LARP7	94	80.360	Nomascus_leucogenys
ENSRNOG00000048989	Larp7	99	66.834	ENSMEUG00000004739	LARP7	100	70.370	Notamacropus_eugenii
ENSRNOG00000048989	Larp7	85	84.733	ENSOPRG00000009594	-	82	84.733	Ochotona_princeps
ENSRNOG00000048989	Larp7	99	74.936	ENSODEG00000011121	LARP7	98	77.758	Octodon_degus
ENSRNOG00000048989	Larp7	99	51.646	ENSONIG00000008763	larp7	95	53.957	Oreochromis_niloticus
ENSRNOG00000048989	Larp7	99	71.429	ENSOANG00000009298	LARP7	94	72.035	Ornithorhynchus_anatinus
ENSRNOG00000048989	Larp7	100	78.291	ENSOCUG00000007073	LARP7	95	78.957	Oryctolagus_cuniculus
ENSRNOG00000048989	Larp7	100	49.114	ENSORLG00000004978	larp7	94	53.480	Oryzias_latipes
ENSRNOG00000048989	Larp7	100	49.114	ENSORLG00020013825	larp7	94	53.663	Oryzias_latipes_hni
ENSRNOG00000048989	Larp7	99	78.589	ENSOGAG00000001643	LARP7	95	81.295	Otolemur_garnettii
ENSRNOG00000048989	Larp7	96	79.323	ENSOARG00000001809	LARP7	95	79.211	Ovis_aries
ENSRNOG00000048989	Larp7	96	79.964	ENSPPAG00000038420	LARP7	94	79.856	Pan_paniscus
ENSRNOG00000048989	Larp7	96	79.606	ENSPPRG00000023256	LARP7	95	79.496	Panthera_pardus
ENSRNOG00000048989	Larp7	99	74.365	ENSPTIG00000021146	LARP7	92	78.571	Panthera_tigris_altaica
ENSRNOG00000048989	Larp7	96	80.322	ENSPTRG00000016380	LARP7	95	80.216	Pan_troglodytes
ENSRNOG00000048989	Larp7	96	80.322	ENSPANG00000006701	LARP7	94	80.216	Papio_anubis
ENSRNOG00000048989	Larp7	98	56.574	ENSPKIG00000023484	larp7	94	55.914	Paramormyrops_kingsleyae
ENSRNOG00000048989	Larp7	99	66.781	ENSPSIG00000014419	LARP7	93	66.846	Pelodiscus_sinensis
ENSRNOG00000048989	Larp7	100	87.053	ENSPEMG00000013978	-	100	87.223	Peromyscus_maniculatus_bairdii
ENSRNOG00000048989	Larp7	100	70.903	ENSPCIG00000020284	LARP7	98	81.197	Phascolarctos_cinereus
ENSRNOG00000048989	Larp7	96	80.680	ENSPPYG00000015010	LARP7	95	80.576	Pongo_abelii
ENSRNOG00000048989	Larp7	81	73.455	ENSPCAG00000003373	-	60	100.000	Procavia_capensis
ENSRNOG00000048989	Larp7	87	82.493	ENSPCOG00000023946	LARP7	94	72.254	Propithecus_coquereli
ENSRNOG00000048989	Larp7	100	76.158	ENSPVAG00000000282	LARP7	100	76.158	Pteropus_vampyrus
ENSRNOG00000048989	Larp7	96	52.679	ENSPNAG00000017554	larp7	94	52.158	Pygocentrus_nattereri
ENSRNOG00000048989	Larp7	100	75.819	ENSRBIG00000031916	LARP7	93	92.593	Rhinopithecus_bieti
ENSRNOG00000048989	Larp7	96	80.466	ENSRROG00000033414	LARP7	95	80.360	Rhinopithecus_roxellana
ENSRNOG00000048989	Larp7	96	81.071	ENSSBOG00000030886	-	95	80.969	Saimiri_boliviensis_boliviensis
ENSRNOG00000048989	Larp7	99	64.599	ENSSBOG00000022652	-	95	59.246	Saimiri_boliviensis_boliviensis
ENSRNOG00000048989	Larp7	100	70.805	ENSSHAG00000008153	LARP7	95	69.258	Sarcophilus_harrisii
ENSRNOG00000048989	Larp7	98	55.245	ENSSFOG00015019344	larp7	94	54.513	Scleropages_formosus
ENSRNOG00000048989	Larp7	76	74.000	ENSSARG00000000190	-	98	73.179	Sorex_araneus
ENSRNOG00000048989	Larp7	98	54.671	ENSSPAG00000016066	larp7	95	52.734	Stegastes_partitus
ENSRNOG00000048989	Larp7	96	79.570	ENSSSCG00000009119	LARP7	95	79.459	Sus_scrofa
ENSRNOG00000048989	Larp7	99	67.863	ENSTGUG00000001804	LARP7	95	67.928	Taeniopygia_guttata
ENSRNOG00000048989	Larp7	68	73.118	ENSTRUG00000004996	larp7	95	49.725	Takifugu_rubripes
ENSRNOG00000048989	Larp7	98	47.432	ENSTNIG00000007183	larp7	95	47.217	Tetraodon_nigroviridis
ENSRNOG00000048989	Larp7	99	76.456	ENSTBEG00000009188	LARP7	95	77.698	Tupaia_belangeri
ENSRNOG00000048989	Larp7	99	73.671	ENSTTRG00000005233	LARP7	100	76.894	Tursiops_truncatus
ENSRNOG00000048989	Larp7	96	79.211	ENSUAMG00000000836	LARP7	95	79.099	Ursus_americanus
ENSRNOG00000048989	Larp7	99	75.127	ENSUMAG00000002263	LARP7	93	78.611	Ursus_maritimus
ENSRNOG00000048989	Larp7	96	79.606	ENSVPAG00000010502	LARP7	95	79.496	Vicugna_pacos
ENSRNOG00000048989	Larp7	96	79.570	ENSVVUG00000002274	LARP7	95	79.459	Vulpes_vulpes
ENSRNOG00000048989	Larp7	98	61.856	ENSXETG00000024097	larp7	94	60.320	Xenopus_tropicalis
ENSRNOG00000048989	Larp7	98	52.827	ENSXCOG00000004883	larp7	83	72.778	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0035562	negative regulation of chromatin binding	-	ISO	Process
GO:0036093	germ cell proliferation	-	ISO	Process
GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	-	ISO	Process
GO:1990904	ribonucleoprotein complex	-	IEA	Component