EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000048990 (Gene tree)
Gene ID: -
Gene Symbol: AABR07037356.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 2376 bases
Position: chrX:19384166-19386541
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066027	GUCT	PF08152.12	1.4e-30	1	1
ENSRNOP00000066027	ResIII	PF04851.15	4.3e-08	1	1
ENSRNOP00000066027	DEAD	PF00270.29	6.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072722	AABR07037356.1-201	2343	XM_008773110	ENSRNOP00000066027	781 (aa)	-	M0R965

Gene Model

Click here to download ENSRNOG00000048990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000048990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000048990	AABR07037356.1	100	99.361	ENSRNOG00000043099	Ddx21	100	99.361
ENSRNOG00000048990	AABR07037356.1	77	63.666	ENSRNOG00000000396	Ddx50	98	58.311

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000048990	AABR07037356.1	100	83.969	ENSG00000165732	DDX21	99	87.273	Homo_sapiens
ENSRNOG00000048990	AABR07037356.1	52	73.723	ENSAPOG00000012269	ddx21	97	59.494	Acanthochromis_polyacanthus
ENSRNOG00000048990	AABR07037356.1	100	76.553	ENSAMEG00000017978	DDX21	100	75.761	Ailuropoda_melanoleuca
ENSRNOG00000048990	AABR07037356.1	73	72.117	ENSACIG00000006429	ddx21	85	69.579	Amphilophus_citrinellus
ENSRNOG00000048990	AABR07037356.1	73	70.912	ENSAOCG00000023174	ddx21	99	60.102	Amphiprion_ocellaris
ENSRNOG00000048990	AABR07037356.1	73	70.912	ENSAPEG00000007108	ddx21	99	60.102	Amphiprion_percula
ENSRNOG00000048990	AABR07037356.1	83	66.163	ENSATEG00000022194	ddx21	99	60.026	Anabas_testudineus
ENSRNOG00000048990	AABR07037356.1	78	71.224	ENSAPLG00000013022	-	95	70.015	Anas_platyrhynchos
ENSRNOG00000048990	AABR07037356.1	81	70.597	ENSACAG00000009829	DDX21	79	70.958	Anolis_carolinensis
ENSRNOG00000048990	AABR07037356.1	100	83.079	ENSANAG00000038109	DDX21	94	93.519	Aotus_nancymaae
ENSRNOG00000048990	AABR07037356.1	71	73.599	ENSACLG00000008248	ddx21	88	63.421	Astatotilapia_calliptera
ENSRNOG00000048990	AABR07037356.1	84	63.868	ENSAMXG00000009140	ddx21	94	62.027	Astyanax_mexicanus
ENSRNOG00000048990	AABR07037356.1	94	84.762	ENSBTAG00000014558	DDX21	100	80.711	Bos_taurus
ENSRNOG00000048990	AABR07037356.1	100	82.443	ENSCJAG00000012876	DDX21	100	83.206	Callithrix_jacchus
ENSRNOG00000048990	AABR07037356.1	100	82.383	ENSCAFG00000013791	DDX21	100	81.519	Canis_familiaris
ENSRNOG00000048990	AABR07037356.1	100	58.184	ENSCHIG00000006053	-	91	58.312	Capra_hircus
ENSRNOG00000048990	AABR07037356.1	92	84.861	ENSCHIG00000000248	-	100	82.827	Capra_hircus
ENSRNOG00000048990	AABR07037356.1	100	61.529	ENSCHIG00000014104	-	92	61.626	Capra_hircus
ENSRNOG00000048990	AABR07037356.1	100	82.592	ENSTSYG00000011231	DDX21	100	81.576	Carlito_syrichta
ENSRNOG00000048990	AABR07037356.1	89	72.231	ENSCAPG00000005945	DDX21	97	70.132	Cavia_aperea
ENSRNOG00000048990	AABR07037356.1	100	83.333	ENSCPOG00000015479	DDX21	100	82.592	Cavia_porcellus
ENSRNOG00000048990	AABR07037356.1	100	82.697	ENSCCAG00000026288	DDX21	96	90.351	Cebus_capucinus
ENSRNOG00000048990	AABR07037356.1	94	69.293	ENSCATG00000045019	-	100	66.624	Cercocebus_atys
ENSRNOG00000048990	AABR07037356.1	100	82.952	ENSCATG00000043540	DDX21	100	83.079	Cercocebus_atys
ENSRNOG00000048990	AABR07037356.1	100	82.242	ENSCLAG00000012235	DDX21	100	83.079	Chinchilla_lanigera
ENSRNOG00000048990	AABR07037356.1	100	72.866	ENSCHOG00000000234	DDX21	100	71.919	Choloepus_hoffmanni
ENSRNOG00000048990	AABR07037356.1	82	72.430	ENSCPBG00000019937	-	76	72.430	Chrysemys_picta_bellii
ENSRNOG00000048990	AABR07037356.1	84	69.820	ENSCPBG00000019934	-	89	70.724	Chrysemys_picta_bellii
ENSRNOG00000048990	AABR07037356.1	100	82.316	ENSCANG00000039926	DDX21	100	83.461	Colobus_angolensis_palliatus
ENSRNOG00000048990	AABR07037356.1	94	67.799	ENSCANG00000036110	-	98	66.450	Colobus_angolensis_palliatus
ENSRNOG00000048990	AABR07037356.1	100	77.452	ENSCGRG00001017824	-	100	77.735	Cricetulus_griseus_chok1gshd
ENSRNOG00000048990	AABR07037356.1	99	87.356	ENSCGRG00001016264	-	99	88.761	Cricetulus_griseus_chok1gshd
ENSRNOG00000048990	AABR07037356.1	99	87.356	ENSCGRG00000015134	-	99	88.761	Cricetulus_griseus_crigri
ENSRNOG00000048990	AABR07037356.1	100	77.580	ENSCGRG00000008450	-	100	77.863	Cricetulus_griseus_crigri
ENSRNOG00000048990	AABR07037356.1	70	72.376	ENSCSEG00000013939	ddx21	99	59.339	Cynoglossus_semilaevis
ENSRNOG00000048990	AABR07037356.1	81	67.504	ENSCVAG00000018333	ddx21	99	59.545	Cyprinodon_variegatus
ENSRNOG00000048990	AABR07037356.1	72	72.242	ENSDARG00000063626	ddx21	79	68.232	Danio_rerio
ENSRNOG00000048990	AABR07037356.1	96	81.046	ENSDNOG00000001680	DDX21	99	80.052	Dasypus_novemcinctus
ENSRNOG00000048990	AABR07037356.1	100	78.471	ENSDORG00000002202	Ddx21	100	78.599	Dipodomys_ordii
ENSRNOG00000048990	AABR07037356.1	100	76.339	ENSETEG00000014073	DDX21	100	79.073	Echinops_telfairi
ENSRNOG00000048990	AABR07037356.1	100	81.078	ENSEASG00005015598	DDX21	100	80.678	Equus_asinus_asinus
ENSRNOG00000048990	AABR07037356.1	100	82.234	ENSECAG00000010810	DDX21	100	81.242	Equus_caballus
ENSRNOG00000048990	AABR07037356.1	72	82.746	ENSEEUG00000005959	DDX21	100	74.069	Erinaceus_europaeus
ENSRNOG00000048990	AABR07037356.1	69	72.626	ENSELUG00000018856	ddx21	81	67.987	Esox_lucius
ENSRNOG00000048990	AABR07037356.1	100	83.333	ENSFCAG00000002109	DDX21	100	82.465	Felis_catus
ENSRNOG00000048990	AABR07037356.1	75	67.119	ENSFALG00000013043	-	92	64.715	Ficedula_albicollis
ENSRNOG00000048990	AABR07037356.1	78	71.803	ENSFALG00000013022	-	89	72.000	Ficedula_albicollis
ENSRNOG00000048990	AABR07037356.1	100	83.206	ENSFDAG00000007401	DDX21	100	82.846	Fukomys_damarensis
ENSRNOG00000048990	AABR07037356.1	68	73.596	ENSFHEG00000019089	ddx21	99	58.831	Fundulus_heteroclitus
ENSRNOG00000048990	AABR07037356.1	68	67.290	ENSGMOG00000012354	ddx21	99	63.547	Gadus_morhua
ENSRNOG00000048990	AABR07037356.1	75	71.859	ENSGALG00000004144	-	95	67.704	Gallus_gallus
ENSRNOG00000048990	AABR07037356.1	81	66.614	ENSGALG00000042254	-	86	68.395	Gallus_gallus
ENSRNOG00000048990	AABR07037356.1	75	68.866	ENSGAFG00000003427	ddx21	99	59.618	Gambusia_affinis
ENSRNOG00000048990	AABR07037356.1	68	73.458	ENSGACG00000016060	ddx21	93	68.513	Gasterosteus_aculeatus
ENSRNOG00000048990	AABR07037356.1	87	67.583	ENSGAGG00000022163	-	82	69.618	Gopherus_agassizii
ENSRNOG00000048990	AABR07037356.1	82	70.031	ENSGAGG00000022169	-	100	60.941	Gopherus_agassizii
ENSRNOG00000048990	AABR07037356.1	100	83.969	ENSGGOG00000005065	DDX21	100	84.097	Gorilla_gorilla
ENSRNOG00000048990	AABR07037356.1	71	73.599	ENSHBUG00000017638	ddx21	94	60.128	Haplochromis_burtoni
ENSRNOG00000048990	AABR07037356.1	100	83.185	ENSHGLG00000013902	DDX21	100	83.079	Heterocephalus_glaber_female
ENSRNOG00000048990	AABR07037356.1	100	83.185	ENSHGLG00100015956	DDX21	100	83.079	Heterocephalus_glaber_male
ENSRNOG00000048990	AABR07037356.1	70	71.978	ENSHCOG00000014503	ddx21	81	69.180	Hippocampus_comes
ENSRNOG00000048990	AABR07037356.1	84	64.776	ENSIPUG00000006972	ddx21	83	68.470	Ictalurus_punctatus
ENSRNOG00000048990	AABR07037356.1	100	82.875	ENSSTOG00000011572	DDX21	100	82.250	Ictidomys_tridecemlineatus
ENSRNOG00000048990	AABR07037356.1	100	82.000	ENSJJAG00000014035	Ddx21	100	82.250	Jaculus_jaculus
ENSRNOG00000048990	AABR07037356.1	71	70.705	ENSKMAG00000020766	ddx21	93	62.064	Kryptolebias_marmoratus
ENSRNOG00000048990	AABR07037356.1	75	68.823	ENSLBEG00000001244	ddx21	99	59.975	Labrus_bergylta
ENSRNOG00000048990	AABR07037356.1	78	71.334	ENSLACG00000000658	DDX21	99	71.875	Latimeria_chalumnae
ENSRNOG00000048990	AABR07037356.1	83	64.970	ENSLOCG00000009123	ddx21	99	59.950	Lepisosteus_oculatus
ENSRNOG00000048990	AABR07037356.1	100	80.076	ENSLAFG00000007962	DDX21	100	80.303	Loxodonta_africana
ENSRNOG00000048990	AABR07037356.1	100	83.206	ENSMFAG00000044838	DDX21	95	92.691	Macaca_fascicularis
ENSRNOG00000048990	AABR07037356.1	94	68.970	ENSMFAG00000033536	-	100	66.582	Macaca_fascicularis
ENSRNOG00000048990	AABR07037356.1	94	71.816	ENSMMUG00000032331	-	100	69.416	Macaca_mulatta
ENSRNOG00000048990	AABR07037356.1	100	83.333	ENSMMUG00000001005	DDX21	100	83.461	Macaca_mulatta
ENSRNOG00000048990	AABR07037356.1	100	83.079	ENSMNEG00000032825	DDX21	100	83.461	Macaca_nemestrina
ENSRNOG00000048990	AABR07037356.1	94	69.429	ENSMLEG00000028215	-	100	67.006	Mandrillus_leucophaeus
ENSRNOG00000048990	AABR07037356.1	100	80.407	ENSMLEG00000028940	DDX21	92	91.900	Mandrillus_leucophaeus
ENSRNOG00000048990	AABR07037356.1	80	67.732	ENSMAMG00000019683	ddx21	85	67.732	Mastacembelus_armatus
ENSRNOG00000048990	AABR07037356.1	71	73.599	ENSMZEG00005011618	ddx21	93	63.497	Maylandia_zebra
ENSRNOG00000048990	AABR07037356.1	75	73.569	ENSMGAG00000004298	DDX21	98	70.623	Meleagris_gallopavo
ENSRNOG00000048990	AABR07037356.1	94	90.353	ENSMAUG00000011153	Ddx21	98	88.296	Mesocricetus_auratus
ENSRNOG00000048990	AABR07037356.1	100	83.079	ENSMICG00000015112	-	100	82.061	Microcebus_murinus
ENSRNOG00000048990	AABR07037356.1	100	74.936	ENSMICG00000033371	-	98	76.423	Microcebus_murinus
ENSRNOG00000048990	AABR07037356.1	100	89.144	ENSMOCG00000020855	Ddx21	100	89.144	Microtus_ochrogaster
ENSRNOG00000048990	AABR07037356.1	62	73.859	ENSMMOG00000015938	ddx21	91	73.859	Mola_mola
ENSRNOG00000048990	AABR07037356.1	77	73.736	ENSMODG00000010727	DDX21	100	67.852	Monodelphis_domestica
ENSRNOG00000048990	AABR07037356.1	76	67.399	ENSMALG00000010489	ddx21	90	67.953	Monopterus_albus
ENSRNOG00000048990	AABR07037356.1	100	90.955	MGP_CAROLIEiJ_G0015388	Ddx21	100	91.338	Mus_caroli
ENSRNOG00000048990	AABR07037356.1	100	82.867	ENSMUSG00000020075	Ddx21	100	84.903	Mus_musculus
ENSRNOG00000048990	AABR07037356.1	100	94.170	MGP_SPRETEiJ_G0016199	Ddx21	100	85.032	Mus_spretus
ENSRNOG00000048990	AABR07037356.1	100	80.827	ENSMPUG00000004603	DDX21	100	80.803	Mustela_putorius_furo
ENSRNOG00000048990	AABR07037356.1	99	75.787	ENSMLUG00000023298	DDX21	99	78.755	Myotis_lucifugus
ENSRNOG00000048990	AABR07037356.1	100	86.312	ENSNGAG00000022273	Ddx21	100	87.468	Nannospalax_galili
ENSRNOG00000048990	AABR07037356.1	71	73.599	ENSNBRG00000006198	ddx21	84	69.074	Neolamprologus_brichardi
ENSRNOG00000048990	AABR07037356.1	100	83.969	ENSNLEG00000011591	DDX21	99	86.993	Nomascus_leucogenys
ENSRNOG00000048990	AABR07037356.1	92	74.167	ENSOPRG00000001640	DDX21	100	74.227	Ochotona_princeps
ENSRNOG00000048990	AABR07037356.1	92	67.036	ENSODEG00000012879	-	99	67.680	Octodon_degus
ENSRNOG00000048990	AABR07037356.1	71	73.960	ENSONIG00000005499	ddx21	79	69.388	Oreochromis_niloticus
ENSRNOG00000048990	AABR07037356.1	87	67.591	ENSOANG00000004777	DDX21	99	62.299	Ornithorhynchus_anatinus
ENSRNOG00000048990	AABR07037356.1	99	87.539	ENSOCUG00000002888	DDX21	97	87.539	Oryctolagus_cuniculus
ENSRNOG00000048990	AABR07037356.1	78	68.893	ENSORLG00000010122	ddx21	95	69.489	Oryzias_latipes
ENSRNOG00000048990	AABR07037356.1	71	72.563	ENSORLG00020004409	ddx21	94	69.169	Oryzias_latipes_hni
ENSRNOG00000048990	AABR07037356.1	78	68.730	ENSORLG00015000051	ddx21	95	69.329	Oryzias_latipes_hsok
ENSRNOG00000048990	AABR07037356.1	80	67.727	ENSOMEG00000004523	ddx21	80	68.998	Oryzias_melastigma
ENSRNOG00000048990	AABR07037356.1	100	70.210	ENSOGAG00000001846	-	90	88.481	Otolemur_garnettii
ENSRNOG00000048990	AABR07037356.1	77	79.900	ENSOGAG00000031242	-	99	78.641	Otolemur_garnettii
ENSRNOG00000048990	AABR07037356.1	92	85.021	ENSOARG00000005307	DDX21	100	81.552	Ovis_aries
ENSRNOG00000048990	AABR07037356.1	100	84.097	ENSPPAG00000036670	DDX21	100	84.224	Pan_paniscus
ENSRNOG00000048990	AABR07037356.1	100	83.461	ENSPPRG00000012523	DDX21	100	82.592	Panthera_pardus
ENSRNOG00000048990	AABR07037356.1	100	83.206	ENSPTIG00000007268	DDX21	100	82.338	Panthera_tigris_altaica
ENSRNOG00000048990	AABR07037356.1	100	84.097	ENSPTRG00000002563	DDX21	100	84.224	Pan_troglodytes
ENSRNOG00000048990	AABR07037356.1	94	68.886	ENSPANG00000031334	-	100	66.497	Papio_anubis
ENSRNOG00000048990	AABR07037356.1	100	83.333	ENSPANG00000022140	DDX21	100	83.461	Papio_anubis
ENSRNOG00000048990	AABR07037356.1	85	64.448	ENSPKIG00000014660	ddx21	84	67.773	Paramormyrops_kingsleyae
ENSRNOG00000048990	AABR07037356.1	88	67.760	ENSPSIG00000004724	DDX21	98	68.406	Pelodiscus_sinensis
ENSRNOG00000048990	AABR07037356.1	100	91.699	ENSPEMG00000018513	Ddx21	100	92.357	Peromyscus_maniculatus_bairdii
ENSRNOG00000048990	AABR07037356.1	96	68.110	ENSPCIG00000015505	DDX21	94	69.517	Phascolarctos_cinereus
ENSRNOG00000048990	AABR07037356.1	72	71.303	ENSPFOG00000016196	ddx21	94	59.212	Poecilia_formosa
ENSRNOG00000048990	AABR07037356.1	68	72.128	ENSPLAG00000017849	ddx21	85	68.500	Poecilia_latipinna
ENSRNOG00000048990	AABR07037356.1	72	71.303	ENSPMEG00000014571	ddx21	94	59.085	Poecilia_mexicana
ENSRNOG00000048990	AABR07037356.1	100	83.715	ENSPPYG00000002389	DDX21	100	83.969	Pongo_abelii
ENSRNOG00000048990	AABR07037356.1	88	77.410	ENSPCAG00000016697	DDX21	100	77.554	Procavia_capensis
ENSRNOG00000048990	AABR07037356.1	100	79.898	ENSPCOG00000019284	DDX21	100	79.389	Propithecus_coquereli
ENSRNOG00000048990	AABR07037356.1	100	81.321	ENSPVAG00000009521	DDX21	100	81.369	Pteropus_vampyrus
ENSRNOG00000048990	AABR07037356.1	67	74.046	ENSPNYG00000015566	ddx21	99	67.350	Pundamilia_nyererei
ENSRNOG00000048990	AABR07037356.1	67	73.143	ENSPNAG00000004814	ddx21	80	70.246	Pygocentrus_nattereri
ENSRNOG00000048990	AABR07037356.1	100	76.531	ENSRBIG00000035862	-	100	74.653	Rhinopithecus_bieti
ENSRNOG00000048990	AABR07037356.1	100	83.461	ENSRBIG00000043721	-	100	83.588	Rhinopithecus_bieti
ENSRNOG00000048990	AABR07037356.1	100	83.333	ENSRROG00000033387	DDX21	100	83.461	Rhinopithecus_roxellana
ENSRNOG00000048990	AABR07037356.1	96	63.298	ENSSBOG00000025801	-	97	61.873	Saimiri_boliviensis_boliviensis
ENSRNOG00000048990	AABR07037356.1	88	62.571	ENSSFOG00015014610	ddx21	94	67.794	Scleropages_formosus
ENSRNOG00000048990	AABR07037356.1	69	73.458	ENSSMAG00000003932	ddx21	81	68.750	Scophthalmus_maximus
ENSRNOG00000048990	AABR07037356.1	71	73.140	ENSSDUG00000021420	ddx21	81	69.968	Seriola_dumerili
ENSRNOG00000048990	AABR07037356.1	70	73.297	ENSSLDG00000025665	ddx21	95	70.292	Seriola_lalandi_dorsalis
ENSRNOG00000048990	AABR07037356.1	69	63.636	ENSSARG00000014024	-	69	67.550	Sorex_araneus
ENSRNOG00000048990	AABR07037356.1	79	71.961	ENSSPUG00000004088	DDX21	83	73.096	Sphenodon_punctatus
ENSRNOG00000048990	AABR07037356.1	69	73.889	ENSSPAG00000013142	ddx21	99	60.637	Stegastes_partitus
ENSRNOG00000048990	AABR07037356.1	100	83.227	ENSSSCG00000010247	DDX21	100	82.360	Sus_scrofa
ENSRNOG00000048990	AABR07037356.1	68	79.362	ENSTGUG00000003810	-	89	72.713	Taeniopygia_guttata
ENSRNOG00000048990	AABR07037356.1	69	74.444	ENSTRUG00000017570	ddx21	82	70.492	Takifugu_rubripes
ENSRNOG00000048990	AABR07037356.1	74	71.528	ENSTNIG00000013798	ddx21	98	70.401	Tetraodon_nigroviridis
ENSRNOG00000048990	AABR07037356.1	87	77.467	ENSTBEG00000002310	DDX21	100	72.750	Tupaia_belangeri
ENSRNOG00000048990	AABR07037356.1	100	80.838	ENSTTRG00000016398	DDX21	100	79.848	Tursiops_truncatus
ENSRNOG00000048990	AABR07037356.1	100	83.040	ENSUMAG00000007735	DDX21	100	82.309	Ursus_maritimus
ENSRNOG00000048990	AABR07037356.1	86	83.382	ENSVPAG00000000627	DDX21	99	82.966	Vicugna_pacos
ENSRNOG00000048990	AABR07037356.1	100	82.412	ENSVVUG00000020486	DDX21	100	81.430	Vulpes_vulpes
ENSRNOG00000048990	AABR07037356.1	74	67.474	ENSXCOG00000009654	ddx21	93	60.478	Xiphophorus_couchianus
ENSRNOG00000048990	AABR07037356.1	72	70.599	ENSXMAG00000008199	ddx21	99	59.564	Xiphophorus_maculatus