EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000049034 (Gene tree)
Gene ID: 362113
Gene Symbol: Ptrh1
Alias: LOC362113|RGD1310165
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 13679 bases
Position: chr3:11811962-11825640
Accession: 1310165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000032989	Pept_tRNA_hydro	PF01195.19	1.3e-39	1	1
ENSRNOP00000057009	Pept_tRNA_hydro	PF01195.19	5.9e-19	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000060258	-	624	-	ENSRNOP00000057009	208 (aa)	-	F1M8A9
ENSRNOT00000039151	-	615	XM_003749449	ENSRNOP00000032989	204 (aa)	XP_003749497	D3ZI43

Gene Model

Click here to download ENSRNOG00000049034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049034	Ptrh1	98	82.412	ENSG00000187024	PTRH1	93	82.412	Homo_sapiens
ENSRNOG00000049034	Ptrh1	89	60.440	ENSAPOG00000010719	ptrh1	65	60.440	Acanthochromis_polyacanthus
ENSRNOG00000049034	Ptrh1	89	60.440	ENSAPOG00000000947	PTRH1	65	60.440	Acanthochromis_polyacanthus
ENSRNOG00000049034	Ptrh1	89	60.440	ENSAPOG00000003014	-	65	60.440	Acanthochromis_polyacanthus
ENSRNOG00000049034	Ptrh1	99	74.877	ENSAMEG00000016791	PTRH1	96	74.877	Ailuropoda_melanoleuca
ENSRNOG00000049034	Ptrh1	84	61.404	ENSACIG00000006734	ptrh1	73	61.404	Amphilophus_citrinellus
ENSRNOG00000049034	Ptrh1	89	58.242	ENSAOCG00000009725	ptrh1	65	58.242	Amphiprion_ocellaris
ENSRNOG00000049034	Ptrh1	89	58.242	ENSAPEG00000020993	ptrh1	65	58.242	Amphiprion_percula
ENSRNOG00000049034	Ptrh1	89	58.791	ENSATEG00000010003	ptrh1	65	58.791	Anabas_testudineus
ENSRNOG00000049034	Ptrh1	98	78.894	ENSANAG00000025547	PTRH1	93	78.894	Aotus_nancymaae
ENSRNOG00000049034	Ptrh1	86	59.429	ENSACLG00000025462	ptrh1	72	59.341	Astatotilapia_calliptera
ENSRNOG00000049034	Ptrh1	86	58.286	ENSAMXG00000034117	ptrh1	66	58.286	Astyanax_mexicanus
ENSRNOG00000049034	Ptrh1	86	70.621	ENSBTAG00000012736	PTRH1	60	70.621	Bos_taurus
ENSRNOG00000049034	Ptrh1	95	81.347	ENSCJAG00000019841	PTRH1	91	67.456	Callithrix_jacchus
ENSRNOG00000049034	Ptrh1	94	80.829	ENSCAFG00000020123	PTRH1	90	80.829	Canis_familiaris
ENSRNOG00000049034	Ptrh1	94	81.250	ENSCAFG00020015776	PTRH1	86	81.250	Canis_lupus_dingo
ENSRNOG00000049034	Ptrh1	98	78.500	ENSCHIG00000008188	PTRH1	93	78.500	Capra_hircus
ENSRNOG00000049034	Ptrh1	52	80.189	ENSTSYG00000026891	-	98	80.189	Carlito_syrichta
ENSRNOG00000049034	Ptrh1	68	84.783	ENSCAPG00000015926	PTRH1	99	84.783	Cavia_aperea
ENSRNOG00000049034	Ptrh1	98	83.000	ENSCPOG00000023968	PTRH1	93	83.000	Cavia_porcellus
ENSRNOG00000049034	Ptrh1	98	80.402	ENSCCAG00000023134	PTRH1	93	80.402	Cebus_capucinus
ENSRNOG00000049034	Ptrh1	97	83.249	ENSCATG00000042852	PTRH1	92	83.249	Cercocebus_atys
ENSRNOG00000049034	Ptrh1	97	82.234	ENSCLAG00000011155	PTRH1	92	82.234	Chinchilla_lanigera
ENSRNOG00000049034	Ptrh1	97	83.249	ENSCSAG00000013748	PTRH1	86	83.249	Chlorocebus_sabaeus
ENSRNOG00000049034	Ptrh1	78	60.625	ENSCPBG00000025207	PTRH1	91	60.625	Chrysemys_picta_bellii
ENSRNOG00000049034	Ptrh1	97	82.090	ENSCANG00000039856	PTRH1	94	82.090	Colobus_angolensis_palliatus
ENSRNOG00000049034	Ptrh1	100	87.255	ENSCGRG00001013108	Ptrh1	100	87.255	Cricetulus_griseus_chok1gshd
ENSRNOG00000049034	Ptrh1	89	88.462	ENSCGRG00000016553	Ptrh1	100	88.462	Cricetulus_griseus_crigri
ENSRNOG00000049034	Ptrh1	88	55.307	ENSCSEG00000010332	ptrh1	65	55.307	Cynoglossus_semilaevis
ENSRNOG00000049034	Ptrh1	86	56.571	ENSCVAG00000010701	ptrh1	67	56.593	Cyprinodon_variegatus
ENSRNOG00000049034	Ptrh1	64	50.758	ENSCVAG00000003873	-	80	61.468	Cyprinodon_variegatus
ENSRNOG00000049034	Ptrh1	88	55.801	ENSDARG00000098206	ptrh1	79	55.801	Danio_rerio
ENSRNOG00000049034	Ptrh1	97	81.818	ENSDNOG00000024194	PTRH1	93	81.818	Dasypus_novemcinctus
ENSRNOG00000049034	Ptrh1	98	81.592	ENSDORG00000013321	Ptrh1	93	81.592	Dipodomys_ordii
ENSRNOG00000049034	Ptrh1	98	83.500	ENSEASG00005020466	PTRH1	93	83.500	Equus_asinus_asinus
ENSRNOG00000049034	Ptrh1	98	82.500	ENSECAG00000007615	PTRH1	74	82.500	Equus_caballus
ENSRNOG00000049034	Ptrh1	86	58.857	ENSELUG00000015467	ptrh1	65	58.857	Esox_lucius
ENSRNOG00000049034	Ptrh1	98	75.000	ENSFCAG00000001483	PTRH1	96	75.000	Felis_catus
ENSRNOG00000049034	Ptrh1	89	54.688	ENSFALG00000001352	PTRH1	91	54.688	Ficedula_albicollis
ENSRNOG00000049034	Ptrh1	99	79.803	ENSFDAG00000020077	PTRH1	99	79.803	Fukomys_damarensis
ENSRNOG00000049034	Ptrh1	89	58.791	ENSFHEG00000010590	ptrh1	69	58.791	Fundulus_heteroclitus
ENSRNOG00000049034	Ptrh1	57	54.701	ENSGMOG00000009801	PTRH1	84	54.701	Gadus_morhua
ENSRNOG00000049034	Ptrh1	89	58.242	ENSGAFG00000016215	ptrh1	72	59.649	Gambusia_affinis
ENSRNOG00000049034	Ptrh1	87	58.427	ENSGACG00000014682	ptrh1	95	58.696	Gasterosteus_aculeatus
ENSRNOG00000049034	Ptrh1	96	60.714	ENSGAGG00000022860	PTRH1	88	60.714	Gopherus_agassizii
ENSRNOG00000049034	Ptrh1	98	82.412	ENSGGOG00000011033	PTRH1	93	82.412	Gorilla_gorilla
ENSRNOG00000049034	Ptrh1	86	59.429	ENSHBUG00000020824	ptrh1	65	59.341	Haplochromis_burtoni
ENSRNOG00000049034	Ptrh1	97	82.323	ENSHGLG00000019147	PTRH1	97	82.323	Heterocephalus_glaber_female
ENSRNOG00000049034	Ptrh1	97	79.188	ENSHGLG00100003681	PTRH1	99	79.188	Heterocephalus_glaber_male
ENSRNOG00000049034	Ptrh1	89	56.593	ENSHCOG00000014772	ptrh1	69	56.593	Hippocampus_comes
ENSRNOG00000049034	Ptrh1	86	61.143	ENSIPUG00000015364	ptrh1	69	61.143	Ictalurus_punctatus
ENSRNOG00000049034	Ptrh1	96	83.673	ENSSTOG00000008942	PTRH1	92	83.673	Ictidomys_tridecemlineatus
ENSRNOG00000049034	Ptrh1	98	84.000	ENSJJAG00000014338	Ptrh1	97	84.000	Jaculus_jaculus
ENSRNOG00000049034	Ptrh1	86	59.659	ENSKMAG00000003253	ptrh1	64	59.659	Kryptolebias_marmoratus
ENSRNOG00000049034	Ptrh1	62	61.111	ENSLBEG00000028842	ptrh1	75	61.111	Labrus_bergylta
ENSRNOG00000049034	Ptrh1	95	57.216	ENSLACG00000016741	PTRH1	80	57.216	Latimeria_chalumnae
ENSRNOG00000049034	Ptrh1	98	77.114	ENSLAFG00000021934	PTRH1	99	77.114	Loxodonta_africana
ENSRNOG00000049034	Ptrh1	97	83.249	ENSMFAG00000001700	PTRH1	92	83.249	Macaca_fascicularis
ENSRNOG00000049034	Ptrh1	97	83.249	ENSMMUG00000016424	PTRH1	92	83.249	Macaca_mulatta
ENSRNOG00000049034	Ptrh1	97	83.249	ENSMNEG00000033061	PTRH1	86	83.249	Macaca_nemestrina
ENSRNOG00000049034	Ptrh1	51	85.577	ENSMLEG00000042412	-	96	85.577	Mandrillus_leucophaeus
ENSRNOG00000049034	Ptrh1	86	57.714	ENSMAMG00000017386	ptrh1	71	56.771	Mastacembelus_armatus
ENSRNOG00000049034	Ptrh1	86	59.429	ENSMZEG00005020001	ptrh1	72	59.341	Maylandia_zebra
ENSRNOG00000049034	Ptrh1	100	88.725	ENSMAUG00000006266	Ptrh1	100	88.725	Mesocricetus_auratus
ENSRNOG00000049034	Ptrh1	99	81.683	ENSMICG00000005611	PTRH1	94	81.683	Microcebus_murinus
ENSRNOG00000049034	Ptrh1	100	91.176	ENSMOCG00000013992	Ptrh1	100	91.176	Microtus_ochrogaster
ENSRNOG00000049034	Ptrh1	87	59.887	ENSMMOG00000014747	ptrh1	64	59.341	Mola_mola
ENSRNOG00000049034	Ptrh1	94	68.586	ENSMODG00000005503	PTRH1	88	68.586	Monodelphis_domestica
ENSRNOG00000049034	Ptrh1	63	56.589	ENSMALG00000005392	ptrh1	75	56.589	Monopterus_albus
ENSRNOG00000049034	Ptrh1	100	96.078	MGP_CAROLIEiJ_G0023450	Ptrh1	100	96.078	Mus_caroli
ENSRNOG00000049034	Ptrh1	100	96.078	ENSMUSG00000053746	Ptrh1	100	96.078	Mus_musculus
ENSRNOG00000049034	Ptrh1	100	96.569	MGP_PahariEiJ_G0024907	Ptrh1	100	96.569	Mus_pahari
ENSRNOG00000049034	Ptrh1	100	96.078	MGP_SPRETEiJ_G0024367	Ptrh1	100	96.078	Mus_spretus
ENSRNOG00000049034	Ptrh1	100	77.184	ENSMPUG00000013790	PTRH1	94	77.184	Mustela_putorius_furo
ENSRNOG00000049034	Ptrh1	98	78.199	ENSMLUG00000013454	PTRH1	95	78.199	Myotis_lucifugus
ENSRNOG00000049034	Ptrh1	99	83.251	ENSNGAG00000014008	Ptrh1	99	83.251	Nannospalax_galili
ENSRNOG00000049034	Ptrh1	86	59.429	ENSNBRG00000015590	ptrh1	65	59.341	Neolamprologus_brichardi
ENSRNOG00000049034	Ptrh1	98	82.412	ENSNLEG00000017468	PTRH1	93	82.412	Nomascus_leucogenys
ENSRNOG00000049034	Ptrh1	95	48.454	ENSMEUG00000009694	-	96	48.454	Notamacropus_eugenii
ENSRNOG00000049034	Ptrh1	99	81.095	ENSODEG00000004012	PTRH1	94	81.095	Octodon_degus
ENSRNOG00000049034	Ptrh1	86	58.286	ENSONIG00000013912	ptrh1	70	58.242	Oreochromis_niloticus
ENSRNOG00000049034	Ptrh1	97	63.959	ENSOANG00000011891	PTRH1	87	63.959	Ornithorhynchus_anatinus
ENSRNOG00000049034	Ptrh1	98	81.000	ENSOCUG00000006894	PTRH1	87	81.000	Oryctolagus_cuniculus
ENSRNOG00000049034	Ptrh1	99	82.090	ENSOGAG00000008094	PTRH1	96	82.090	Otolemur_garnettii
ENSRNOG00000049034	Ptrh1	98	67.299	ENSOARG00000011808	PTRH1	95	67.299	Ovis_aries
ENSRNOG00000049034	Ptrh1	98	82.412	ENSPPAG00000041782	PTRH1	93	82.412	Pan_paniscus
ENSRNOG00000049034	Ptrh1	98	75.369	ENSPPRG00000007889	PTRH1	95	75.369	Panthera_pardus
ENSRNOG00000049034	Ptrh1	57	78.448	ENSPTIG00000021082	-	91	78.448	Panthera_tigris_altaica
ENSRNOG00000049034	Ptrh1	98	82.412	ENSPTRG00000021394	PTRH1	93	82.412	Pan_troglodytes
ENSRNOG00000049034	Ptrh1	97	71.000	ENSPANG00000031755	PTRH1	92	71.000	Papio_anubis
ENSRNOG00000049034	Ptrh1	88	56.667	ENSPKIG00000005449	ptrh1	60	56.667	Paramormyrops_kingsleyae
ENSRNOG00000049034	Ptrh1	95	57.732	ENSPSIG00000013828	PTRH1	71	57.732	Pelodiscus_sinensis
ENSRNOG00000049034	Ptrh1	90	50.000	ENSPMGG00000002148	ptrh1	67	50.802	Periophthalmus_magnuspinnatus
ENSRNOG00000049034	Ptrh1	100	89.706	ENSPEMG00000014360	Ptrh1	100	89.706	Peromyscus_maniculatus_bairdii
ENSRNOG00000049034	Ptrh1	89	58.791	ENSPFOG00000003715	ptrh1	69	58.791	Poecilia_formosa
ENSRNOG00000049034	Ptrh1	86	59.429	ENSPLAG00000023354	ptrh1	70	59.429	Poecilia_latipinna
ENSRNOG00000049034	Ptrh1	89	58.791	ENSPMEG00000000447	ptrh1	69	58.791	Poecilia_mexicana
ENSRNOG00000049034	Ptrh1	89	58.791	ENSPREG00000012612	ptrh1	69	58.791	Poecilia_reticulata
ENSRNOG00000049034	Ptrh1	98	78.392	ENSPPYG00000019628	PTRH1	87	78.392	Pongo_abelii
ENSRNOG00000049034	Ptrh1	98	82.000	ENSPCAG00000007016	PTRH1	93	82.000	Procavia_capensis
ENSRNOG00000049034	Ptrh1	99	82.178	ENSPCOG00000014541	PTRH1	94	82.178	Propithecus_coquereli
ENSRNOG00000049034	Ptrh1	98	83.500	ENSPVAG00000000954	PTRH1	93	83.500	Pteropus_vampyrus
ENSRNOG00000049034	Ptrh1	86	59.429	ENSPNYG00000007789	ptrh1	65	59.341	Pundamilia_nyererei
ENSRNOG00000049034	Ptrh1	86	60.571	ENSPNAG00000029930	ptrh1	66	60.571	Pygocentrus_nattereri
ENSRNOG00000049034	Ptrh1	97	82.090	ENSRBIG00000027290	PTRH1	94	82.090	Rhinopithecus_bieti
ENSRNOG00000049034	Ptrh1	97	82.090	ENSRROG00000028799	PTRH1	88	82.090	Rhinopithecus_roxellana
ENSRNOG00000049034	Ptrh1	85	30.645	YHR189W	PTH1	97	30.645	Saccharomyces_cerevisiae
ENSRNOG00000049034	Ptrh1	98	80.905	ENSSBOG00000026699	PTRH1	87	80.905	Saimiri_boliviensis_boliviensis
ENSRNOG00000049034	Ptrh1	96	65.672	ENSSHAG00000018238	PTRH1	98	65.672	Sarcophilus_harrisii
ENSRNOG00000049034	Ptrh1	96	58.163	ENSSFOG00015007053	ptrh1	92	58.163	Scleropages_formosus
ENSRNOG00000049034	Ptrh1	88	55.615	ENSSMAG00000016747	ptrh1	79	55.615	Scophthalmus_maximus
ENSRNOG00000049034	Ptrh1	86	55.429	ENSSDUG00000013471	ptrh1	92	54.971	Seriola_dumerili
ENSRNOG00000049034	Ptrh1	80	57.576	ENSSLDG00000024662	ptrh1	80	56.593	Seriola_lalandi_dorsalis
ENSRNOG00000049034	Ptrh1	95	57.513	ENSSPUG00000000040	PTRH1	85	57.513	Sphenodon_punctatus
ENSRNOG00000049034	Ptrh1	89	59.669	ENSSPAG00000003298	ptrh1	90	59.669	Stegastes_partitus
ENSRNOG00000049034	Ptrh1	98	82.500	ENSSSCG00000005615	PTRH1	93	82.500	Sus_scrofa
ENSRNOG00000049034	Ptrh1	66	67.164	ENSTGUG00000003648	PTRH1	100	67.164	Taeniopygia_guttata
ENSRNOG00000049034	Ptrh1	86	56.571	ENSTRUG00000019801	PTRH1	67	56.593	Takifugu_rubripes
ENSRNOG00000049034	Ptrh1	89	57.609	ENSTNIG00000016735	ptrh1	82	57.609	Tetraodon_nigroviridis
ENSRNOG00000049034	Ptrh1	63	81.522	ENSTBEG00000001921	-	60	81.522	Tupaia_belangeri
ENSRNOG00000049034	Ptrh1	96	78.571	ENSTTRG00000016458	PTRH1	92	78.571	Tursiops_truncatus
ENSRNOG00000049034	Ptrh1	100	79.902	ENSUAMG00000023948	-	91	79.902	Ursus_americanus
ENSRNOG00000049034	Ptrh1	87	66.854	ENSVPAG00000001805	PTRH1	98	66.854	Vicugna_pacos
ENSRNOG00000049034	Ptrh1	99	78.218	ENSVVUG00000013198	PTRH1	91	78.218	Vulpes_vulpes
ENSRNOG00000049034	Ptrh1	87	55.618	ENSXETG00000009980	ptrh1	95	55.618	Xenopus_tropicalis
ENSRNOG00000049034	Ptrh1	84	59.064	ENSXCOG00000011498	ptrh1	73	59.064	Xiphophorus_couchianus
ENSRNOG00000049034	Ptrh1	89	57.692	ENSXMAG00000009256	ptrh1	69	57.692	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004045	aminoacyl-tRNA hydrolase activity	-	IEA	Function