EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000049121 (Gene tree)
Gene ID: 359727
Gene Symbol: Bysl
Alias: -
Full Name: bystin-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9788 bases
Position: chr9:15393330-15403117
Accession: 727959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000067656	Bystin	PF05291.11	6e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075630	-	1707	-	ENSRNOP00000067656	436 (aa)	-	M0RDF7

Gene Model

Click here to download ENSRNOG00000049121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049121	Bysl	100	90.847	ENSG00000112578	BYSL	97	95.506	Homo_sapiens
ENSRNOG00000049121	Bysl	98	74.246	ENSAPOG00000017917	bysl	98	74.246	Acanthochromis_polyacanthus
ENSRNOG00000049121	Bysl	100	91.304	ENSAMEG00000013033	BYSL	100	91.533	Ailuropoda_melanoleuca
ENSRNOG00000049121	Bysl	68	87.162	ENSACIG00000019537	bysl	97	87.162	Amphilophus_citrinellus
ENSRNOG00000049121	Bysl	94	76.456	ENSAOCG00000001625	bysl	98	74.306	Amphiprion_ocellaris
ENSRNOG00000049121	Bysl	94	76.456	ENSAPEG00000014739	bysl	98	74.306	Amphiprion_percula
ENSRNOG00000049121	Bysl	98	75.174	ENSATEG00000006316	bysl	98	75.174	Anabas_testudineus
ENSRNOG00000049121	Bysl	75	81.818	ENSAPLG00000008733	BYSL	98	81.818	Anas_platyrhynchos
ENSRNOG00000049121	Bysl	99	74.429	ENSACAG00000003079	BYSL	91	75.571	Anolis_carolinensis
ENSRNOG00000049121	Bysl	100	91.076	ENSANAG00000036138	BYSL	100	91.304	Aotus_nancymaae
ENSRNOG00000049121	Bysl	98	75.174	ENSACLG00000022434	bysl	98	75.174	Astatotilapia_calliptera
ENSRNOG00000049121	Bysl	99	72.109	ENSAMXG00000008799	bysl	99	72.109	Astyanax_mexicanus
ENSRNOG00000049121	Bysl	100	91.304	ENSBTAG00000010101	BYSL	100	91.304	Bos_taurus
ENSRNOG00000049121	Bysl	96	50.463	WBGene00000276	byn-1	92	51.185	Caenorhabditis_elegans
ENSRNOG00000049121	Bysl	100	90.847	ENSCJAG00000004266	BYSL	100	91.076	Callithrix_jacchus
ENSRNOG00000049121	Bysl	100	89.703	ENSCAFG00000001614	BYSL	100	89.703	Canis_familiaris
ENSRNOG00000049121	Bysl	100	89.703	ENSCAFG00020008426	BYSL	100	89.703	Canis_lupus_dingo
ENSRNOG00000049121	Bysl	100	91.762	ENSCHIG00000017590	BYSL	73	91.762	Capra_hircus
ENSRNOG00000049121	Bysl	100	90.618	ENSTSYG00000029904	BYSL	100	90.618	Carlito_syrichta
ENSRNOG00000049121	Bysl	67	95.918	ENSCAPG00000015987	BYSL	100	95.918	Cavia_aperea
ENSRNOG00000049121	Bysl	100	91.972	ENSCPOG00000004403	BYSL	100	91.972	Cavia_porcellus
ENSRNOG00000049121	Bysl	100	91.076	ENSCCAG00000036583	BYSL	100	91.304	Cebus_capucinus
ENSRNOG00000049121	Bysl	100	91.304	ENSCATG00000039266	BYSL	100	91.304	Cercocebus_atys
ENSRNOG00000049121	Bysl	100	93.119	ENSCLAG00000014143	BYSL	100	93.119	Chinchilla_lanigera
ENSRNOG00000049121	Bysl	100	91.304	ENSCSAG00000011306	BYSL	100	91.304	Chlorocebus_sabaeus
ENSRNOG00000049121	Bysl	72	94.667	ENSCHOG00000011476	BYSL	72	94.667	Choloepus_hoffmanni
ENSRNOG00000049121	Bysl	99	75.455	ENSCPBG00000017439	BYSL	99	75.455	Chrysemys_picta_bellii
ENSRNOG00000049121	Bysl	98	55.374	ENSCING00000001646	-	97	55.374	Ciona_intestinalis
ENSRNOG00000049121	Bysl	98	53.380	ENSCSAVG00000008659	-	96	53.380	Ciona_savignyi
ENSRNOG00000049121	Bysl	100	90.847	ENSCANG00000031335	BYSL	100	90.847	Colobus_angolensis_palliatus
ENSRNOG00000049121	Bysl	64	91.197	ENSCGRG00001008990	-	91	91.197	Cricetulus_griseus_chok1gshd
ENSRNOG00000049121	Bysl	67	84.483	ENSCGRG00001007527	-	99	81.433	Cricetulus_griseus_chok1gshd
ENSRNOG00000049121	Bysl	59	97.015	ENSCGRG00001022668	-	86	97.015	Cricetulus_griseus_chok1gshd
ENSRNOG00000049121	Bysl	97	78.723	ENSCGRG00001010109	-	98	78.622	Cricetulus_griseus_chok1gshd
ENSRNOG00000049121	Bysl	100	86.239	ENSCGRG00001006626	-	100	86.239	Cricetulus_griseus_chok1gshd
ENSRNOG00000049121	Bysl	67	79.866	ENSCGRG00000016274	-	100	79.866	Cricetulus_griseus_crigri
ENSRNOG00000049121	Bysl	97	88.235	ENSCGRG00000016761	-	99	88.235	Cricetulus_griseus_crigri
ENSRNOG00000049121	Bysl	100	86.425	ENSCGRG00000000072	-	100	86.652	Cricetulus_griseus_crigri
ENSRNOG00000049121	Bysl	67	73.220	ENSCGRG00000002253	-	100	73.129	Cricetulus_griseus_crigri
ENSRNOG00000049121	Bysl	99	86.977	ENSCGRG00000013448	-	98	86.775	Cricetulus_griseus_crigri
ENSRNOG00000049121	Bysl	98	75.000	ENSCSEG00000002246	bysl	93	75.000	Cynoglossus_semilaevis
ENSRNOG00000049121	Bysl	94	77.427	ENSCVAG00000023275	bysl	98	74.827	Cyprinodon_variegatus
ENSRNOG00000049121	Bysl	99	73.455	ENSDARG00000001057	bysl	90	73.455	Danio_rerio
ENSRNOG00000049121	Bysl	100	91.284	ENSDNOG00000016670	BYSL	100	91.284	Dasypus_novemcinctus
ENSRNOG00000049121	Bysl	100	93.349	ENSDORG00000010968	Bysl	100	93.349	Dipodomys_ordii
ENSRNOG00000049121	Bysl	95	51.079	FBgn0010292	bys	92	51.079	Drosophila_melanogaster
ENSRNOG00000049121	Bysl	99	68.213	ENSETEG00000018226	BYSL	99	68.213	Echinops_telfairi
ENSRNOG00000049121	Bysl	98	65.429	ENSEBUG00000000925	bysl	96	65.429	Eptatretus_burgeri
ENSRNOG00000049121	Bysl	100	91.533	ENSEASG00005003059	BYSL	100	91.762	Equus_asinus_asinus
ENSRNOG00000049121	Bysl	100	91.762	ENSECAG00000021260	BYSL	100	91.991	Equus_caballus
ENSRNOG00000049121	Bysl	96	75.238	ENSELUG00000014214	bysl	97	72.789	Esox_lucius
ENSRNOG00000049121	Bysl	100	92.202	ENSFCAG00000026154	BYSL	100	92.202	Felis_catus
ENSRNOG00000049121	Bysl	66	87.456	ENSFALG00000002897	BYSL	94	87.456	Ficedula_albicollis
ENSRNOG00000049121	Bysl	100	86.009	ENSFDAG00000014804	BYSL	100	86.009	Fukomys_damarensis
ENSRNOG00000049121	Bysl	94	78.398	ENSFHEG00000005147	bysl	98	75.399	Fundulus_heteroclitus
ENSRNOG00000049121	Bysl	99	71.625	ENSGMOG00000008061	bysl	99	71.625	Gadus_morhua
ENSRNOG00000049121	Bysl	97	73.302	ENSGALG00000003467	BYSL	98	73.068	Gallus_gallus
ENSRNOG00000049121	Bysl	94	75.485	ENSGAFG00000021598	bysl	99	71.847	Gambusia_affinis
ENSRNOG00000049121	Bysl	98	73.903	ENSGACG00000001059	bysl	98	73.903	Gasterosteus_aculeatus
ENSRNOG00000049121	Bysl	99	75.000	ENSGAGG00000017774	BYSL	99	75.000	Gopherus_agassizii
ENSRNOG00000049121	Bysl	100	90.847	ENSGGOG00000027046	BYSL	100	90.847	Gorilla_gorilla
ENSRNOG00000049121	Bysl	98	75.174	ENSHBUG00000002896	bysl	98	75.174	Haplochromis_burtoni
ENSRNOG00000049121	Bysl	100	91.743	ENSHGLG00000017479	BYSL	100	91.743	Heterocephalus_glaber_female
ENSRNOG00000049121	Bysl	100	91.743	ENSHGLG00100011829	BYSL	100	91.743	Heterocephalus_glaber_male
ENSRNOG00000049121	Bysl	98	71.528	ENSHCOG00000005390	bysl	98	71.528	Hippocampus_comes
ENSRNOG00000049121	Bysl	99	71.396	ENSIPUG00000017509	BYSL	99	72.523	Ictalurus_punctatus
ENSRNOG00000049121	Bysl	100	91.972	ENSSTOG00000021848	BYSL	99	91.972	Ictidomys_tridecemlineatus
ENSRNOG00000049121	Bysl	100	93.807	ENSJJAG00000023129	-	100	93.807	Jaculus_jaculus
ENSRNOG00000049121	Bysl	69	78.878	ENSJJAG00000003859	-	100	78.878	Jaculus_jaculus
ENSRNOG00000049121	Bysl	94	76.513	ENSKMAG00000021439	bysl	98	73.793	Kryptolebias_marmoratus
ENSRNOG00000049121	Bysl	99	72.009	ENSLOCG00000012661	bysl	99	72.009	Lepisosteus_oculatus
ENSRNOG00000049121	Bysl	89	92.506	ENSLAFG00000015418	BYSL	100	92.573	Loxodonta_africana
ENSRNOG00000049121	Bysl	100	91.304	ENSMFAG00000033214	BYSL	100	91.304	Macaca_fascicularis
ENSRNOG00000049121	Bysl	100	91.076	ENSMMUG00000004416	BYSL	99	91.076	Macaca_mulatta
ENSRNOG00000049121	Bysl	100	91.076	ENSMNEG00000043045	BYSL	100	91.076	Macaca_nemestrina
ENSRNOG00000049121	Bysl	100	91.304	ENSMLEG00000041724	BYSL	100	91.304	Mandrillus_leucophaeus
ENSRNOG00000049121	Bysl	98	74.306	ENSMAMG00000023910	bysl	98	74.306	Mastacembelus_armatus
ENSRNOG00000049121	Bysl	98	74.942	ENSMZEG00005011046	bysl	98	74.942	Maylandia_zebra
ENSRNOG00000049121	Bysl	58	86.905	ENSMGAG00000006299	BYSL	97	86.905	Meleagris_gallopavo
ENSRNOG00000049121	Bysl	67	95.652	ENSMAUG00000010845	Bysl	100	95.652	Mesocricetus_auratus
ENSRNOG00000049121	Bysl	100	91.533	ENSMICG00000011347	BYSL	100	91.762	Microcebus_murinus
ENSRNOG00000049121	Bysl	100	95.183	ENSMOCG00000002210	Bysl	100	95.183	Microtus_ochrogaster
ENSRNOG00000049121	Bysl	69	85.197	ENSMMOG00000021768	bysl	99	85.197	Mola_mola
ENSRNOG00000049121	Bysl	100	82.045	ENSMODG00000012808	BYSL	100	83.144	Monodelphis_domestica
ENSRNOG00000049121	Bysl	98	73.963	ENSMALG00000018147	bysl	98	74.194	Monopterus_albus
ENSRNOG00000049121	Bysl	100	94.495	MGP_CAROLIEiJ_G0021703	Bysl	100	94.495	Mus_caroli
ENSRNOG00000049121	Bysl	100	94.725	ENSMUSG00000023988	Bysl	100	94.725	Mus_musculus
ENSRNOG00000049121	Bysl	100	95.872	MGP_PahariEiJ_G0020693	Bysl	100	95.872	Mus_pahari
ENSRNOG00000049121	Bysl	100	94.495	MGP_SPRETEiJ_G0022615	Bysl	100	94.495	Mus_spretus
ENSRNOG00000049121	Bysl	100	90.160	ENSMPUG00000013486	BYSL	100	90.160	Mustela_putorius_furo
ENSRNOG00000049121	Bysl	100	91.991	ENSMLUG00000014028	BYSL	100	91.762	Myotis_lucifugus
ENSRNOG00000049121	Bysl	67	96.575	ENSNGAG00000005496	Bysl	100	96.575	Nannospalax_galili
ENSRNOG00000049121	Bysl	98	75.000	ENSNBRG00000006639	bysl	98	75.000	Neolamprologus_brichardi
ENSRNOG00000049121	Bysl	100	81.236	ENSNLEG00000032809	BYSL	100	81.236	Nomascus_leucogenys
ENSRNOG00000049121	Bysl	67	90.785	ENSMEUG00000000759	BYSL	100	90.785	Notamacropus_eugenii
ENSRNOG00000049121	Bysl	100	91.762	ENSOPRG00000015845	BYSL	100	91.762	Ochotona_princeps
ENSRNOG00000049121	Bysl	100	91.284	ENSODEG00000016059	BYSL	100	91.284	Octodon_degus
ENSRNOG00000049121	Bysl	98	74.710	ENSONIG00000018932	bysl	97	74.710	Oreochromis_niloticus
ENSRNOG00000049121	Bysl	100	91.991	ENSOCUG00000017567	BYSL	100	92.220	Oryctolagus_cuniculus
ENSRNOG00000049121	Bysl	98	73.782	ENSORLG00000000248	bysl	98	73.782	Oryzias_latipes
ENSRNOG00000049121	Bysl	98	73.550	ENSORLG00020008275	bysl	98	73.550	Oryzias_latipes_hni
ENSRNOG00000049121	Bysl	98	73.782	ENSORLG00015004475	bysl	98	73.782	Oryzias_latipes_hsok
ENSRNOG00000049121	Bysl	94	74.757	ENSOMEG00000015003	bysl	98	72.517	Oryzias_melastigma
ENSRNOG00000049121	Bysl	100	91.762	ENSOGAG00000015234	BYSL	100	91.762	Otolemur_garnettii
ENSRNOG00000049121	Bysl	85	91.223	ENSOARG00000002863	BYSL	100	91.223	Ovis_aries
ENSRNOG00000049121	Bysl	100	91.076	ENSPPAG00000028063	BYSL	100	91.076	Pan_paniscus
ENSRNOG00000049121	Bysl	100	92.202	ENSPPRG00000010500	BYSL	100	92.202	Panthera_pardus
ENSRNOG00000049121	Bysl	100	92.202	ENSPTIG00000010244	BYSL	100	92.202	Panthera_tigris_altaica
ENSRNOG00000049121	Bysl	100	91.076	ENSPTRG00000018163	BYSL	100	91.076	Pan_troglodytes
ENSRNOG00000049121	Bysl	100	91.076	ENSPANG00000007619	BYSL	100	91.076	Papio_anubis
ENSRNOG00000049121	Bysl	96	73.621	ENSPKIG00000001265	bysl	99	71.689	Paramormyrops_kingsleyae
ENSRNOG00000049121	Bysl	94	77.938	ENSPSIG00000009405	BYSL	98	76.201	Pelodiscus_sinensis
ENSRNOG00000049121	Bysl	98	74.126	ENSPMGG00000004006	bysl	98	74.126	Periophthalmus_magnuspinnatus
ENSRNOG00000049121	Bysl	100	95.183	ENSPEMG00000022283	Bysl	99	96.980	Peromyscus_maniculatus_bairdii
ENSRNOG00000049121	Bysl	75	79.027	ENSPMAG00000000953	bysl	96	78.806	Petromyzon_marinus
ENSRNOG00000049121	Bysl	100	82.232	ENSPCIG00000025889	BYSL	100	82.232	Phascolarctos_cinereus
ENSRNOG00000049121	Bysl	94	76.699	ENSPFOG00000000406	bysl	98	73.793	Poecilia_formosa
ENSRNOG00000049121	Bysl	94	76.699	ENSPLAG00000013506	bysl	98	73.793	Poecilia_latipinna
ENSRNOG00000049121	Bysl	94	76.942	ENSPMEG00000004461	bysl	98	74.023	Poecilia_mexicana
ENSRNOG00000049121	Bysl	94	75.845	ENSPREG00000004437	bysl	98	72.998	Poecilia_reticulata
ENSRNOG00000049121	Bysl	53	91.810	ENSPPYG00000017273	-	100	91.810	Pongo_abelii
ENSRNOG00000049121	Bysl	80	89.565	ENSPCAG00000004575	BYSL	80	89.565	Procavia_capensis
ENSRNOG00000049121	Bysl	100	76.430	ENSPCOG00000003664	-	100	76.430	Propithecus_coquereli
ENSRNOG00000049121	Bysl	100	91.076	ENSPCOG00000020727	-	100	91.304	Propithecus_coquereli
ENSRNOG00000049121	Bysl	100	91.304	ENSPVAG00000007606	BYSL	100	91.533	Pteropus_vampyrus
ENSRNOG00000049121	Bysl	98	75.174	ENSPNYG00000007839	bysl	98	75.174	Pundamilia_nyererei
ENSRNOG00000049121	Bysl	99	71.918	ENSPNAG00000010533	bysl	99	71.918	Pygocentrus_nattereri
ENSRNOG00000049121	Bysl	100	90.618	ENSRBIG00000030183	BYSL	100	90.618	Rhinopithecus_bieti
ENSRNOG00000049121	Bysl	97	91.981	ENSRROG00000030276	-	98	91.981	Rhinopithecus_roxellana
ENSRNOG00000049121	Bysl	100	90.618	ENSRROG00000007843	-	100	90.618	Rhinopithecus_roxellana
ENSRNOG00000049121	Bysl	96	34.968	YBR247C	ENP1	95	36.325	Saccharomyces_cerevisiae
ENSRNOG00000049121	Bysl	100	90.618	ENSSBOG00000034517	BYSL	100	90.847	Saimiri_boliviensis_boliviensis
ENSRNOG00000049121	Bysl	100	82.313	ENSSHAG00000003954	BYSL	100	82.313	Sarcophilus_harrisii
ENSRNOG00000049121	Bysl	98	72.748	ENSSFOG00015016401	bysl	98	72.748	Scleropages_formosus
ENSRNOG00000049121	Bysl	94	75.243	ENSSMAG00000000371	bysl	98	72.644	Scophthalmus_maximus
ENSRNOG00000049121	Bysl	94	76.699	ENSSDUG00000009127	bysl	98	74.710	Seriola_dumerili
ENSRNOG00000049121	Bysl	94	76.699	ENSSLDG00000022707	bysl	98	74.710	Seriola_lalandi_dorsalis
ENSRNOG00000049121	Bysl	99	70.046	ENSSPUG00000007702	BYSL	99	69.816	Sphenodon_punctatus
ENSRNOG00000049121	Bysl	94	76.699	ENSSPAG00000013378	bysl	98	74.023	Stegastes_partitus
ENSRNOG00000049121	Bysl	100	87.414	ENSSSCG00000026752	BYSL	100	87.643	Sus_scrofa
ENSRNOG00000049121	Bysl	98	74.710	ENSTRUG00000008963	bysl	97	84.122	Takifugu_rubripes
ENSRNOG00000049121	Bysl	97	75.587	ENSTNIG00000014648	bysl	97	75.587	Tetraodon_nigroviridis
ENSRNOG00000049121	Bysl	67	94.539	ENSTBEG00000009332	-	67	94.539	Tupaia_belangeri
ENSRNOG00000049121	Bysl	100	82.838	ENSTTRG00000009429	BYSL	100	83.066	Tursiops_truncatus
ENSRNOG00000049121	Bysl	100	91.304	ENSUAMG00000027838	BYSL	100	91.533	Ursus_americanus
ENSRNOG00000049121	Bysl	100	83.220	ENSUMAG00000011988	BYSL	100	83.447	Ursus_maritimus
ENSRNOG00000049121	Bysl	81	93.939	ENSVPAG00000005678	BYSL	81	93.939	Vicugna_pacos
ENSRNOG00000049121	Bysl	100	89.703	ENSVVUG00000026680	BYSL	100	89.703	Vulpes_vulpes
ENSRNOG00000049121	Bysl	100	73.059	ENSXETG00000011846	bysl	100	73.059	Xenopus_tropicalis
ENSRNOG00000049121	Bysl	94	71.845	ENSXCOG00000003684	bysl	99	68.161	Xiphophorus_couchianus
ENSRNOG00000049121	Bysl	94	76.341	ENSXMAG00000001060	bysl	99	72.360	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	IEA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	ISO	Process
GO:0001701	in utero embryonic development	-	ISO	Process
GO:0001825	blastocyst formation	-	ISO	Process
GO:0001829	trophectodermal cell differentiation	-	IEA	Process
GO:0001829	trophectodermal cell differentiation	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	16706835.	IDA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005881	cytoplasmic microtubule	15305856.	IDA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0007420	brain development	16706835.	IEP	Process
GO:0008283	cell proliferation	-	IEA	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0030515	snoRNA binding	21873635.	IBA	Function
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0042995	cell projection	16706835.	IDA	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045177	apical part of cell	-	IEA	Component
GO:0045177	apical part of cell	-	ISO	Component
GO:0048471	perinuclear region of cytoplasm	15305856.	IDA	Component
GO:0071222	cellular response to lipopolysaccharide	15305856.	IEP	Process
GO:0071347	cellular response to interleukin-1	15305856.	IEP	Process
GO:0071363	cellular response to growth factor stimulus	15305856.	IEP	Process
GO:0071407	cellular response to organic cyclic compound	15305856.	IEP	Process