EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000049302 (Gene tree)
Gene ID: 307726
Gene Symbol: Chd9
Alias: CReMM|LOC307726
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 127758 bases
Position: chr19:17366828-17494585
Accession: 1306795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000067932	ResIII	PF04851.15	6.9e-07	1	1
ENSRNOP00000070362	ResIII	PF04851.15	1.7e-06	1	1
ENSRNOP00000068278	BRK	PF07533.16	1.9e-31	1	2
ENSRNOP00000068278	BRK	PF07533.16	1.9e-31	2	2
ENSRNOP00000070362	BRK	PF07533.16	1.1e-30	1	2
ENSRNOP00000070362	BRK	PF07533.16	1.1e-30	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000076830	-	104	-	ENSRNOP00000068501	35 (aa)	-	A0A096MKG1
ENSRNOT00000075914	-	104	-	ENSRNOP00000068032	35 (aa)	-	A0A096MKG1
ENSRNOT00000078786	-	7788	XM_008772343	ENSRNOP00000070362	2596 (aa)	-	A0A0G2JXQ2
ENSRNOT00000075991	-	4159	-	ENSRNOP00000068278	1156 (aa)	-	A0A096MJV7
ENSRNOT00000076814	-	4783	-	ENSRNOP00000068157	1571 (aa)	-	A0A096MJJ9
ENSRNOT00000076138	-	4783	-	ENSRNOP00000067932	1571 (aa)	-	A0A096MJJ9
ENSRNOT00000075970	-	3948	-	ENSRNOP00000068108	125 (aa)	-	A0A096MJF3

Gene Model

Click here to download ENSRNOG00000049302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000049302	Chd9	68	65.869	ENSRNOG00000016744	Chd6	73	58.021
ENSRNOG00000049302	Chd9	83	77.094	ENSRNOG00000006689	Chd7	86	53.506
ENSRNOG00000049302	Chd9	67	73.123	ENSRNOG00000025011	Chd8	75	56.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049302	Chd9	100	90.476	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSRNOG00000049302	Chd9	77	79.390	ENSAPOG00000023034	chd9	86	68.518	Acanthochromis_polyacanthus
ENSRNOG00000049302	Chd9	100	90.095	ENSAMEG00000016232	CHD9	90	87.543	Ailuropoda_melanoleuca
ENSRNOG00000049302	Chd9	93	58.977	ENSACIG00000004097	chd9	73	59.029	Amphilophus_citrinellus
ENSRNOG00000049302	Chd9	94	57.854	ENSAOCG00000005487	chd9	87	68.472	Amphiprion_ocellaris
ENSRNOG00000049302	Chd9	76	80.000	ENSAPEG00000009859	chd9	86	68.518	Amphiprion_percula
ENSRNOG00000049302	Chd9	93	59.400	ENSATEG00000002748	chd9	89	61.846	Anabas_testudineus
ENSRNOG00000049302	Chd9	100	81.547	ENSAPLG00000002826	CHD9	74	80.309	Anas_platyrhynchos
ENSRNOG00000049302	Chd9	100	79.391	ENSACAG00000016150	CHD9	89	76.944	Anolis_carolinensis
ENSRNOG00000049302	Chd9	100	90.349	ENSANAG00000015630	CHD9	88	92.655	Aotus_nancymaae
ENSRNOG00000049302	Chd9	88	79.737	ENSACLG00000016899	chd9	73	60.657	Astatotilapia_calliptera
ENSRNOG00000049302	Chd9	98	55.087	ENSAMXG00000005652	chd9	68	71.711	Astyanax_mexicanus
ENSRNOG00000049302	Chd9	100	89.968	ENSBTAG00000002287	CHD9	90	87.118	Bos_taurus
ENSRNOG00000049302	Chd9	100	90.032	ENSCJAG00000001573	CHD9	88	92.655	Callithrix_jacchus
ENSRNOG00000049302	Chd9	100	89.905	ENSCAFG00000009699	CHD9	90	87.725	Canis_familiaris
ENSRNOG00000049302	Chd9	100	89.905	ENSCAFG00020002879	CHD9	88	93.785	Canis_lupus_dingo
ENSRNOG00000049302	Chd9	100	89.079	ENSCHIG00000021000	CHD9	55	89.079	Capra_hircus
ENSRNOG00000049302	Chd9	100	90.095	ENSTSYG00000007693	CHD9	88	92.655	Carlito_syrichta
ENSRNOG00000049302	Chd9	90	88.732	ENSCAPG00000011604	CHD9	72	72.376	Cavia_aperea
ENSRNOG00000049302	Chd9	100	84.952	ENSCPOG00000036544	CHD9	90	84.421	Cavia_porcellus
ENSRNOG00000049302	Chd9	100	89.968	ENSCCAG00000036178	CHD9	88	92.090	Cebus_capucinus
ENSRNOG00000049302	Chd9	100	90.222	ENSCATG00000036753	CHD9	88	93.220	Cercocebus_atys
ENSRNOG00000049302	Chd9	100	90.095	ENSCLAG00000007137	CHD9	99	92.832	Chinchilla_lanigera
ENSRNOG00000049302	Chd9	100	90.095	ENSCSAG00000005311	CHD9	90	87.959	Chlorocebus_sabaeus
ENSRNOG00000049302	Chd9	77	83.992	ENSCHOG00000003935	CHD9	66	84.211	Choloepus_hoffmanni
ENSRNOG00000049302	Chd9	92	94.379	ENSCPBG00000012459	CHD9	99	78.715	Chrysemys_picta_bellii
ENSRNOG00000049302	Chd9	100	90.159	ENSCANG00000030349	CHD9	88	93.220	Colobus_angolensis_palliatus
ENSRNOG00000049302	Chd9	100	92.821	ENSCGRG00001016150	Chd9	90	90.050	Cricetulus_griseus_chok1gshd
ENSRNOG00000049302	Chd9	100	92.821	ENSCGRG00000012850	Chd9	99	94.913	Cricetulus_griseus_crigri
ENSRNOG00000049302	Chd9	76	78.638	ENSCSEG00000009209	chd9	67	69.395	Cynoglossus_semilaevis
ENSRNOG00000049302	Chd9	77	80.316	ENSCVAG00000016195	chd9	89	59.985	Cyprinodon_variegatus
ENSRNOG00000049302	Chd9	98	56.412	ENSDARG00000074498	chd9	87	68.270	Danio_rerio
ENSRNOG00000049302	Chd9	98	84.835	ENSDNOG00000006045	CHD9	88	88.620	Dasypus_novemcinctus
ENSRNOG00000049302	Chd9	98	82.353	ENSDORG00000008523	-	85	87.884	Dipodomys_ordii
ENSRNOG00000049302	Chd9	91	88.571	ENSETEG00000009565	CHD9	84	84.675	Echinops_telfairi
ENSRNOG00000049302	Chd9	100	90.349	ENSEASG00005014832	CHD9	98	85.852	Equus_asinus_asinus
ENSRNOG00000049302	Chd9	100	90.413	ENSECAG00000011505	CHD9	90	87.844	Equus_caballus
ENSRNOG00000049302	Chd9	82	96.685	ENSEEUG00000014515	CHD9	76	96.685	Erinaceus_europaeus
ENSRNOG00000049302	Chd9	77	77.860	ENSELUG00000006031	chd9	85	67.503	Esox_lucius
ENSRNOG00000049302	Chd9	100	89.651	ENSFCAG00000022534	CHD9	88	93.220	Felis_catus
ENSRNOG00000049302	Chd9	98	77.633	ENSFALG00000013276	CHD9	88	83.888	Ficedula_albicollis
ENSRNOG00000049302	Chd9	100	90.159	ENSFDAG00000021037	CHD9	90	87.950	Fukomys_damarensis
ENSRNOG00000049302	Chd9	76	81.203	ENSFHEG00000006068	chd9	89	59.053	Fundulus_heteroclitus
ENSRNOG00000049302	Chd9	67	77.226	ENSGMOG00000006040	chd9	78	73.153	Gadus_morhua
ENSRNOG00000049302	Chd9	100	81.611	ENSGALG00000039178	CHD9	92	80.183	Gallus_gallus
ENSRNOG00000049302	Chd9	94	56.309	ENSGAFG00000010014	chd9	86	67.299	Gambusia_affinis
ENSRNOG00000049302	Chd9	67	80.243	ENSGACG00000016694	chd9	84	71.394	Gasterosteus_aculeatus
ENSRNOG00000049302	Chd9	72	80.791	ENSGAGG00000001048	-	88	80.791	Gopherus_agassizii
ENSRNOG00000049302	Chd9	100	90.540	ENSGGOG00000014816	CHD9	88	93.220	Gorilla_gorilla
ENSRNOG00000049302	Chd9	93	59.050	ENSHBUG00000023322	chd9	86	66.842	Haplochromis_burtoni
ENSRNOG00000049302	Chd9	100	90.667	ENSHGLG00000014938	CHD9	99	93.642	Heterocephalus_glaber_female
ENSRNOG00000049302	Chd9	55	93.642	ENSHGLG00100001011	-	99	93.642	Heterocephalus_glaber_male
ENSRNOG00000049302	Chd9	72	93.220	ENSHGLG00100007620	-	89	93.220	Heterocephalus_glaber_male
ENSRNOG00000049302	Chd9	85	72.340	ENSHCOG00000000937	chd9	88	67.289	Hippocampus_comes
ENSRNOG00000049302	Chd9	93	58.229	ENSIPUG00000016448	chd9	81	69.663	Ictalurus_punctatus
ENSRNOG00000049302	Chd9	100	90.152	ENSSTOG00000022273	CHD9	99	93.526	Ictidomys_tridecemlineatus
ENSRNOG00000049302	Chd9	98	83.160	ENSJJAG00000015741	-	85	88.123	Jaculus_jaculus
ENSRNOG00000049302	Chd9	93	58.408	ENSKMAG00000016784	chd9	89	59.963	Kryptolebias_marmoratus
ENSRNOG00000049302	Chd9	90	63.205	ENSLBEG00000012077	chd9	84	63.223	Labrus_bergylta
ENSRNOG00000049302	Chd9	100	70.131	ENSLACG00000005557	CHD9	90	68.564	Latimeria_chalumnae
ENSRNOG00000049302	Chd9	78	81.851	ENSLOCG00000007225	chd9	68	75.627	Lepisosteus_oculatus
ENSRNOG00000049302	Chd9	100	89.277	ENSLAFG00000015374	CHD9	90	87.424	Loxodonta_africana
ENSRNOG00000049302	Chd9	100	90.286	ENSMFAG00000041354	CHD9	88	93.220	Macaca_fascicularis
ENSRNOG00000049302	Chd9	100	90.286	ENSMMUG00000016310	CHD9	88	93.220	Macaca_mulatta
ENSRNOG00000049302	Chd9	100	90.286	ENSMNEG00000031494	CHD9	100	87.490	Macaca_nemestrina
ENSRNOG00000049302	Chd9	100	90.286	ENSMLEG00000043219	CHD9	88	93.220	Mandrillus_leucophaeus
ENSRNOG00000049302	Chd9	84	69.100	ENSMAMG00000003909	chd9	89	60.249	Mastacembelus_armatus
ENSRNOG00000049302	Chd9	93	58.290	ENSMZEG00005006581	chd9	67	72.031	Maylandia_zebra
ENSRNOG00000049302	Chd9	98	76.066	ENSMGAG00000004642	CHD9	72	75.124	Meleagris_gallopavo
ENSRNOG00000049302	Chd9	55	94.220	ENSMAUG00000011087	-	99	94.220	Mesocricetus_auratus
ENSRNOG00000049302	Chd9	74	93.220	ENSMAUG00000000526	-	92	93.220	Mesocricetus_auratus
ENSRNOG00000049302	Chd9	100	90.603	ENSMICG00000016679	CHD9	88	93.220	Microcebus_murinus
ENSRNOG00000049302	Chd9	55	94.682	ENSMOCG00000018583	-	99	94.682	Microtus_ochrogaster
ENSRNOG00000049302	Chd9	74	93.220	ENSMOCG00000010691	-	90	93.220	Microtus_ochrogaster
ENSRNOG00000049302	Chd9	76	81.109	ENSMMOG00000016406	chd9	74	60.692	Mola_mola
ENSRNOG00000049302	Chd9	98	65.712	ENSMODG00000013142	-	85	86.875	Monodelphis_domestica
ENSRNOG00000049302	Chd9	76	81.681	ENSMALG00000013306	chd9	73	60.329	Monopterus_albus
ENSRNOG00000049302	Chd9	100	95.290	MGP_CAROLIEiJ_G0031364	Chd9	90	93.462	Mus_caroli
ENSRNOG00000049302	Chd9	100	95.035	ENSMUSG00000056608	Chd9	99	96.532	Mus_musculus
ENSRNOG00000049302	Chd9	100	94.908	MGP_PahariEiJ_G0022964	Chd9	90	91.577	Mus_pahari
ENSRNOG00000049302	Chd9	100	95.099	MGP_SPRETEiJ_G0032483	Chd9	90	93.154	Mus_spretus
ENSRNOG00000049302	Chd9	100	90.032	ENSMPUG00000003285	CHD9	90	87.763	Mustela_putorius_furo
ENSRNOG00000049302	Chd9	100	89.079	ENSMLUG00000004456	CHD9	90	86.802	Myotis_lucifugus
ENSRNOG00000049302	Chd9	72	92.655	ENSNGAG00000015820	-	88	92.655	Nannospalax_galili
ENSRNOG00000049302	Chd9	55	93.988	ENSNGAG00000019957	-	99	93.988	Nannospalax_galili
ENSRNOG00000049302	Chd9	75	78.518	ENSNBRG00000009423	chd9	67	71.844	Neolamprologus_brichardi
ENSRNOG00000049302	Chd9	100	90.286	ENSNLEG00000001026	CHD9	100	87.686	Nomascus_leucogenys
ENSRNOG00000049302	Chd9	84	93.464	ENSMEUG00000008222	-	84	93.464	Notamacropus_eugenii
ENSRNOG00000049302	Chd9	84	96.000	ENSOPRG00000011168	CHD9	76	96.000	Ochotona_princeps
ENSRNOG00000049302	Chd9	100	89.651	ENSODEG00000004466	CHD9	90	87.414	Octodon_degus
ENSRNOG00000049302	Chd9	75	81.332	ENSONIG00000002816	chd9	87	60.381	Oreochromis_niloticus
ENSRNOG00000049302	Chd9	100	82.193	ENSOANG00000013401	CHD9	90	81.291	Ornithorhynchus_anatinus
ENSRNOG00000049302	Chd9	98	86.123	ENSOCUG00000001016	CHD9	87	89.469	Oryctolagus_cuniculus
ENSRNOG00000049302	Chd9	94	56.878	ENSORLG00000013810	chd9	89	59.392	Oryzias_latipes
ENSRNOG00000049302	Chd9	91	80.283	ENSORLG00020020665	chd9	90	60.142	Oryzias_latipes_hni
ENSRNOG00000049302	Chd9	94	56.384	ENSORLG00015019126	chd9	99	60.172	Oryzias_latipes_hsok
ENSRNOG00000049302	Chd9	100	89.601	ENSOGAG00000002110	CHD9	90	87.615	Otolemur_garnettii
ENSRNOG00000049302	Chd9	100	89.905	ENSOARG00000017664	CHD9	90	86.903	Ovis_aries
ENSRNOG00000049302	Chd9	98	84.735	ENSPPAG00000039388	-	88	88.413	Pan_paniscus
ENSRNOG00000049302	Chd9	100	89.524	ENSPPRG00000004801	CHD9	88	93.220	Panthera_pardus
ENSRNOG00000049302	Chd9	100	89.460	ENSPTIG00000021854	CHD9	91	93.220	Panthera_tigris_altaica
ENSRNOG00000049302	Chd9	100	90.476	ENSPTRG00000008113	CHD9	88	93.220	Pan_troglodytes
ENSRNOG00000049302	Chd9	100	90.286	ENSPANG00000019307	CHD9	88	93.220	Papio_anubis
ENSRNOG00000049302	Chd9	100	64.170	ENSPKIG00000021876	chd9	68	73.242	Paramormyrops_kingsleyae
ENSRNOG00000049302	Chd9	100	59.197	ENSPKIG00000025401	-	71	60.734	Paramormyrops_kingsleyae
ENSRNOG00000049302	Chd9	100	79.835	ENSPSIG00000008099	CHD9	99	78.240	Pelodiscus_sinensis
ENSRNOG00000049302	Chd9	67	69.022	ENSPMGG00000021802	chd9	81	69.022	Periophthalmus_magnuspinnatus
ENSRNOG00000049302	Chd9	74	94.915	ENSPEMG00000021464	-	90	94.915	Peromyscus_maniculatus_bairdii
ENSRNOG00000049302	Chd9	66	54.359	ENSPMAG00000006035	-	72	64.045	Petromyzon_marinus
ENSRNOG00000049302	Chd9	100	84.211	ENSPCIG00000017215	CHD9	97	84.642	Phascolarctos_cinereus
ENSRNOG00000049302	Chd9	94	55.146	ENSPFOG00000015839	chd9	89	59.027	Poecilia_formosa
ENSRNOG00000049302	Chd9	94	56.540	ENSPLAG00000011118	chd9	86	68.047	Poecilia_latipinna
ENSRNOG00000049302	Chd9	94	57.614	ENSPMEG00000015106	chd9	89	59.579	Poecilia_mexicana
ENSRNOG00000049302	Chd9	94	58.703	ENSPREG00000006473	chd9	86	67.240	Poecilia_reticulata
ENSRNOG00000049302	Chd9	100	90.476	ENSPPYG00000007348	CHD9	90	87.916	Pongo_abelii
ENSRNOG00000049302	Chd9	96	92.647	ENSPCAG00000007564	CHD9	86	92.647	Procavia_capensis
ENSRNOG00000049302	Chd9	100	90.921	ENSPCOG00000028433	CHD9	88	93.220	Propithecus_coquereli
ENSRNOG00000049302	Chd9	92	94.872	ENSPVAG00000015617	CHD9	87	85.659	Pteropus_vampyrus
ENSRNOG00000049302	Chd9	88	79.404	ENSPNYG00000010947	chd9	67	71.903	Pundamilia_nyererei
ENSRNOG00000049302	Chd9	89	70.837	ENSPNAG00000024141	chd9	90	59.536	Pygocentrus_nattereri
ENSRNOG00000049302	Chd9	98	85.281	ENSRBIG00000035553	CHD9	88	93.220	Rhinopithecus_bieti
ENSRNOG00000049302	Chd9	98	85.208	ENSRROG00000033278	CHD9	88	93.220	Rhinopithecus_roxellana
ENSRNOG00000049302	Chd9	100	89.968	ENSSBOG00000030240	CHD9	88	92.090	Saimiri_boliviensis_boliviensis
ENSRNOG00000049302	Chd9	100	84.030	ENSSHAG00000002719	CHD9	90	81.801	Sarcophilus_harrisii
ENSRNOG00000049302	Chd9	100	63.965	ENSSFOG00015020209	chd9	68	73.503	Scleropages_formosus
ENSRNOG00000049302	Chd9	90	64.767	ENSSFOG00015001327	chd9	66	73.801	Scleropages_formosus
ENSRNOG00000049302	Chd9	78	77.697	ENSSMAG00000008953	chd9	99	59.688	Scophthalmus_maximus
ENSRNOG00000049302	Chd9	75	81.121	ENSSDUG00000006139	chd9	86	67.901	Seriola_dumerili
ENSRNOG00000049302	Chd9	76	81.121	ENSSLDG00000017818	chd9	86	68.433	Seriola_lalandi_dorsalis
ENSRNOG00000049302	Chd9	95	97.716	ENSSARG00000010632	CHD9	71	90.334	Sorex_araneus
ENSRNOG00000049302	Chd9	72	87.006	ENSSPUG00000017465	-	88	87.006	Sphenodon_punctatus
ENSRNOG00000049302	Chd9	93	57.712	ENSSPAG00000021649	chd9	86	68.176	Stegastes_partitus
ENSRNOG00000049302	Chd9	99	89.879	ENSSSCG00000033591	CHD9	55	89.879	Sus_scrofa
ENSRNOG00000049302	Chd9	100	81.127	ENSTGUG00000007476	CHD9	100	79.702	Taeniopygia_guttata
ENSRNOG00000049302	Chd9	67	80.642	ENSTRUG00000009125	chd9	89	60.284	Takifugu_rubripes
ENSRNOG00000049302	Chd9	60	81.951	ENSTNIG00000003825	chd9	83	81.951	Tetraodon_nigroviridis
ENSRNOG00000049302	Chd9	73	88.288	ENSTBEG00000016052	-	81	88.288	Tupaia_belangeri
ENSRNOG00000049302	Chd9	100	89.841	ENSTTRG00000012674	CHD9	90	86.386	Tursiops_truncatus
ENSRNOG00000049302	Chd9	98	84.055	ENSUAMG00000022706	CHD9	88	93.785	Ursus_americanus
ENSRNOG00000049302	Chd9	100	90.032	ENSUMAG00000004043	CHD9	94	94.059	Ursus_maritimus
ENSRNOG00000049302	Chd9	95	93.197	ENSVPAG00000001374	CHD9	87	87.437	Vicugna_pacos
ENSRNOG00000049302	Chd9	100	89.905	ENSVVUG00000019435	CHD9	90	87.725	Vulpes_vulpes
ENSRNOG00000049302	Chd9	100	73.392	ENSXETG00000000349	chd9	96	71.832	Xenopus_tropicalis
ENSRNOG00000049302	Chd9	94	56.804	ENSXCOG00000012997	chd9	86	68.334	Xiphophorus_couchianus
ENSRNOG00000049302	Chd9	94	56.089	ENSXMAG00000016192	chd9	86	67.646	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0016817	hydrolase activity, acting on acid anhydrides	-	IEA	Function