EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000049330 (Gene tree)
Gene ID: 103693219
Gene Symbol: Mrpl30
Alias: L30mt|LOC301352|MRP-L30
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 87457 bases
Position: chr9:44483875-44571331
Accession: 1308196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000068686	Ribosomal_L30	PF00327.20	9.4e-15	1	1
ENSRNOP00000069419	Ribosomal_L30	PF00327.20	9.4e-15	1	1
ENSRNOP00000067807	Ribosomal_L30	PF00327.20	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000088544	-	483	XM_008767056	ENSRNOP00000069419	160 (aa)	XP_008765278	P0C2C1
ENSRNOT00000075242	-	807	-	ENSRNOP00000067807	179 (aa)	-	A0A0H2UI42
ENSRNOT00000083245	-	2072	XM_008766999	ENSRNOP00000068686	160 (aa)	XP_008765221	P0C2C1

Gene Model

Click here to download ENSRNOG00000049330's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049330	Mrpl30	99	86.076	ENSG00000185414	MRPL30	98	86.076	Homo_sapiens
ENSRNOG00000049330	Mrpl30	99	84.177	ENSAMEG00000013344	-	86	84.177	Ailuropoda_melanoleuca
ENSRNOG00000049330	Mrpl30	99	85.443	ENSANAG00000028266	-	98	85.443	Aotus_nancymaae
ENSRNOG00000049330	Mrpl30	96	52.597	ENSBTAG00000050222	-	95	52.597	Bos_taurus
ENSRNOG00000049330	Mrpl30	99	82.390	ENSBTAG00000038949	MRPL30	99	82.390	Bos_taurus
ENSRNOG00000049330	Mrpl30	99	87.342	ENSCJAG00000007085	-	98	87.342	Callithrix_jacchus
ENSRNOG00000049330	Mrpl30	99	83.544	ENSCAFG00000031628	-	98	83.544	Canis_familiaris
ENSRNOG00000049330	Mrpl30	99	83.544	ENSCAFG00020024965	-	98	83.544	Canis_lupus_dingo
ENSRNOG00000049330	Mrpl30	99	83.648	ENSCHIG00000024135	-	99	83.648	Capra_hircus
ENSRNOG00000049330	Mrpl30	99	71.519	ENSTSYG00000037066	-	98	71.519	Carlito_syrichta
ENSRNOG00000049330	Mrpl30	99	86.076	ENSTSYG00000026939	-	98	86.076	Carlito_syrichta
ENSRNOG00000049330	Mrpl30	96	84.516	ENSCPOG00000010716	-	100	84.516	Cavia_porcellus
ENSRNOG00000049330	Mrpl30	99	80.503	ENSCCAG00000017186	-	98	80.503	Cebus_capucinus
ENSRNOG00000049330	Mrpl30	99	84.810	ENSCCAG00000034467	-	98	84.810	Cebus_capucinus
ENSRNOG00000049330	Mrpl30	99	87.342	ENSCATG00000041078	-	98	87.342	Cercocebus_atys
ENSRNOG00000049330	Mrpl30	97	87.097	ENSCLAG00000005684	-	87	87.097	Chinchilla_lanigera
ENSRNOG00000049330	Mrpl30	99	85.443	ENSCSAG00000017218	-	98	85.443	Chlorocebus_sabaeus
ENSRNOG00000049330	Mrpl30	99	81.013	ENSCHOG00000005804	-	93	81.013	Choloepus_hoffmanni
ENSRNOG00000049330	Mrpl30	99	85.443	ENSCANG00000043682	-	98	85.443	Colobus_angolensis_palliatus
ENSRNOG00000049330	Mrpl30	100	93.750	ENSCGRG00001006119	Mrpl30	100	93.750	Cricetulus_griseus_chok1gshd
ENSRNOG00000049330	Mrpl30	100	93.750	ENSCGRG00000001910	Mrpl30	100	93.750	Cricetulus_griseus_crigri
ENSRNOG00000049330	Mrpl30	99	80.380	ENSDNOG00000018648	-	98	80.380	Dasypus_novemcinctus
ENSRNOG00000049330	Mrpl30	99	78.481	ENSDNOG00000044391	-	98	78.481	Dasypus_novemcinctus
ENSRNOG00000049330	Mrpl30	98	73.077	ENSDNOG00000042586	-	97	73.077	Dasypus_novemcinctus
ENSRNOG00000049330	Mrpl30	99	74.684	ENSDNOG00000032825	-	98	74.684	Dasypus_novemcinctus
ENSRNOG00000049330	Mrpl30	100	86.875	ENSDORG00000010734	Mrpl30	100	86.875	Dipodomys_ordii
ENSRNOG00000049330	Mrpl30	99	87.342	ENSETEG00000005006	-	93	87.342	Echinops_telfairi
ENSRNOG00000049330	Mrpl30	98	84.713	ENSEASG00005021843	-	61	84.713	Equus_asinus_asinus
ENSRNOG00000049330	Mrpl30	98	84.713	ENSECAG00000015993	-	61	84.713	Equus_caballus
ENSRNOG00000049330	Mrpl30	100	84.375	ENSFCAG00000024233	-	66	84.375	Felis_catus
ENSRNOG00000049330	Mrpl30	97	83.871	ENSFDAG00000009803	-	87	83.871	Fukomys_damarensis
ENSRNOG00000049330	Mrpl30	99	86.076	ENSGGOG00000041571	-	98	86.076	Gorilla_gorilla
ENSRNOG00000049330	Mrpl30	96	85.065	ENSHGLG00000006467	-	100	85.065	Heterocephalus_glaber_female
ENSRNOG00000049330	Mrpl30	96	85.065	ENSHGLG00100016969	-	100	85.065	Heterocephalus_glaber_male
ENSRNOG00000049330	Mrpl30	100	84.375	ENSJJAG00000006196	Mrpl30	99	84.375	Jaculus_jaculus
ENSRNOG00000049330	Mrpl30	99	83.648	ENSLAFG00000008151	-	87	83.648	Loxodonta_africana
ENSRNOG00000049330	Mrpl30	99	86.076	ENSMFAG00000001729	MRPL30	98	86.076	Macaca_fascicularis
ENSRNOG00000049330	Mrpl30	99	86.076	ENSMMUG00000038088	-	98	86.076	Macaca_mulatta
ENSRNOG00000049330	Mrpl30	99	71.519	ENSMNEG00000034146	-	86	86.957	Macaca_nemestrina
ENSRNOG00000049330	Mrpl30	99	86.709	ENSMLEG00000027758	-	98	86.709	Mandrillus_leucophaeus
ENSRNOG00000049330	Mrpl30	100	95.000	ENSMAUG00000017646	-	93	95.000	Mesocricetus_auratus
ENSRNOG00000049330	Mrpl30	100	92.500	ENSMAUG00000021333	-	93	92.500	Mesocricetus_auratus
ENSRNOG00000049330	Mrpl30	95	74.342	ENSMAUG00000014813	-	94	74.342	Mesocricetus_auratus
ENSRNOG00000049330	Mrpl30	99	88.608	ENSMICG00000011627	-	98	88.608	Microcebus_murinus
ENSRNOG00000049330	Mrpl30	100	94.375	ENSMOCG00000005615	Mrpl30	100	94.375	Microtus_ochrogaster
ENSRNOG00000049330	Mrpl30	100	97.500	MGP_CAROLIEiJ_G0014057	Mrpl30	100	97.500	Mus_caroli
ENSRNOG00000049330	Mrpl30	100	96.875	ENSMUSG00000026087	Mrpl30	100	96.875	Mus_musculus
ENSRNOG00000049330	Mrpl30	100	98.125	MGP_PahariEiJ_G0027303	Mrpl30	100	98.438	Mus_pahari
ENSRNOG00000049330	Mrpl30	100	98.125	MGP_SPRETEiJ_G0014861	Mrpl30	100	98.125	Mus_spretus
ENSRNOG00000049330	Mrpl30	99	82.278	ENSMPUG00000011085	-	98	82.278	Mustela_putorius_furo
ENSRNOG00000049330	Mrpl30	99	81.646	ENSMLUG00000029851	-	98	81.646	Myotis_lucifugus
ENSRNOG00000049330	Mrpl30	100	85.000	ENSNGAG00000020323	Mrpl30	100	85.000	Nannospalax_galili
ENSRNOG00000049330	Mrpl30	99	87.342	ENSNLEG00000027490	-	98	87.342	Nomascus_leucogenys
ENSRNOG00000049330	Mrpl30	100	83.125	ENSOPRG00000007331	-	96	83.125	Ochotona_princeps
ENSRNOG00000049330	Mrpl30	97	76.774	ENSODEG00000018681	-	87	76.774	Octodon_degus
ENSRNOG00000049330	Mrpl30	97	81.935	ENSODEG00000009949	-	96	81.935	Octodon_degus
ENSRNOG00000049330	Mrpl30	98	82.051	ENSODEG00000006001	-	96	82.051	Octodon_degus
ENSRNOG00000049330	Mrpl30	97	81.935	ENSODEG00000019187	-	87	81.935	Octodon_degus
ENSRNOG00000049330	Mrpl30	99	85.443	ENSOCUG00000004111	-	98	85.443	Oryctolagus_cuniculus
ENSRNOG00000049330	Mrpl30	99	76.730	ENSOGAG00000025954	-	99	76.730	Otolemur_garnettii
ENSRNOG00000049330	Mrpl30	98	75.159	ENSOGAG00000030016	-	97	75.159	Otolemur_garnettii
ENSRNOG00000049330	Mrpl30	98	83.439	ENSOGAG00000002241	-	94	83.439	Otolemur_garnettii
ENSRNOG00000049330	Mrpl30	99	83.648	ENSOARG00000013442	-	99	83.648	Ovis_aries
ENSRNOG00000049330	Mrpl30	99	86.076	ENSPPAG00000038932	-	98	86.076	Pan_paniscus
ENSRNOG00000049330	Mrpl30	99	84.177	ENSPPRG00000008888	-	98	84.177	Panthera_pardus
ENSRNOG00000049330	Mrpl30	99	84.810	ENSPTIG00000004998	-	98	84.810	Panthera_tigris_altaica
ENSRNOG00000049330	Mrpl30	99	86.076	ENSPTRG00000012275	-	98	86.076	Pan_troglodytes
ENSRNOG00000049330	Mrpl30	99	86.709	ENSPANG00000033489	-	98	86.709	Papio_anubis
ENSRNOG00000049330	Mrpl30	100	84.375	ENSPEMG00000007715	-	100	84.375	Peromyscus_maniculatus_bairdii
ENSRNOG00000049330	Mrpl30	100	94.375	ENSPEMG00000018330	-	100	94.375	Peromyscus_maniculatus_bairdii
ENSRNOG00000049330	Mrpl30	99	86.709	ENSPPYG00000019961	-	98	86.709	Pongo_abelii
ENSRNOG00000049330	Mrpl30	99	87.975	ENSPCOG00000013471	-	98	87.975	Propithecus_coquereli
ENSRNOG00000049330	Mrpl30	99	81.646	ENSPCOG00000000860	-	98	81.646	Propithecus_coquereli
ENSRNOG00000049330	Mrpl30	99	81.646	ENSPVAG00000006587	-	92	81.646	Pteropus_vampyrus
ENSRNOG00000049330	Mrpl30	99	78.481	ENSRBIG00000041744	-	98	78.481	Rhinopithecus_bieti
ENSRNOG00000049330	Mrpl30	99	86.076	ENSRROG00000044692	-	98	86.076	Rhinopithecus_roxellana
ENSRNOG00000049330	Mrpl30	99	87.342	ENSSBOG00000036412	-	98	87.342	Saimiri_boliviensis_boliviensis
ENSRNOG00000049330	Mrpl30	87	56.115	ENSSPUG00000000679	-	66	56.115	Sphenodon_punctatus
ENSRNOG00000049330	Mrpl30	99	84.906	ENSSSCG00000008183	-	99	84.906	Sus_scrofa
ENSRNOG00000049330	Mrpl30	99	82.911	ENSTTRG00000004937	-	91	82.911	Tursiops_truncatus
ENSRNOG00000049330	Mrpl30	99	82.911	ENSUAMG00000015567	-	98	82.911	Ursus_americanus
ENSRNOG00000049330	Mrpl30	99	82.911	ENSUMAG00000008932	-	87	82.911	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0006412	translation	-	IEA	Process
GO:0015934	large ribosomal subunit	-	IEA	Component
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0006412	translation	-	IEA	Process
GO:0015934	large ribosomal subunit	-	IEA	Component