EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000049415 (Gene tree)
Gene ID: -
Gene Symbol: AABR07055413.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 649 bases
Position: chr7:2300434-2301082
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000067305	Mago-bind	PF09282.10	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000071785	AABR07055413.1-201	573	-	ENSRNOP00000067305	190 (aa)	-	M0RCI6

Gene Model

Click here to download ENSRNOG00000049415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000049415	AABR07055413.1	94	71.875	ENSRNOG00000058130	Pym1	94	71.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSG00000170473	PYM1	92	67.914	Homo_sapiens
ENSRNOG00000049415	AABR07055413.1	98	46.729	ENSAPOG00000023045	pym1	80	51.462	Acanthochromis_polyacanthus
ENSRNOG00000049415	AABR07055413.1	92	56.316	ENSAMEG00000003091	PYM1	93	61.376	Ailuropoda_melanoleuca
ENSRNOG00000049415	AABR07055413.1	98	44.393	ENSACIG00000012769	pym1	80	51.163	Amphilophus_citrinellus
ENSRNOG00000049415	AABR07055413.1	98	47.393	ENSAOCG00000021358	pym1	80	52.941	Amphiprion_ocellaris
ENSRNOG00000049415	AABR07055413.1	98	47.393	ENSAPEG00000022679	pym1	80	52.941	Amphiprion_percula
ENSRNOG00000049415	AABR07055413.1	99	39.151	ENSATEG00000024022	pym1	80	49.112	Anabas_testudineus
ENSRNOG00000049415	AABR07055413.1	53	72.381	ENSACAG00000005714	PYM1	94	51.961	Anolis_carolinensis
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSANAG00000036967	PYM1	92	67.380	Aotus_nancymaae
ENSRNOG00000049415	AABR07055413.1	100	43.243	ENSAMXG00000007650	pym1	78	50.581	Astyanax_mexicanus
ENSRNOG00000049415	AABR07055413.1	91	60.638	ENSBTAG00000031146	PYM1	92	65.775	Bos_taurus
ENSRNOG00000049415	AABR07055413.1	91	61.702	ENSCJAG00000041077	PYM1	92	66.845	Callithrix_jacchus
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSCAFG00000000076	PYM1	92	67.914	Canis_familiaris
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSCAFG00020026099	PYM1	92	67.914	Canis_lupus_dingo
ENSRNOG00000049415	AABR07055413.1	91	59.043	ENSCHIG00000026207	PYM1	92	64.171	Capra_hircus
ENSRNOG00000049415	AABR07055413.1	91	66.310	ENSTSYG00000000787	PYM1	92	66.310	Carlito_syrichta
ENSRNOG00000049415	AABR07055413.1	84	61.714	ENSCAPG00000010374	PYM1	91	67.241	Cavia_aperea
ENSRNOG00000049415	AABR07055413.1	91	63.298	ENSCPOG00000031546	PYM1	92	68.449	Cavia_porcellus
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSCCAG00000026187	PYM1	92	67.380	Cebus_capucinus
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSCATG00000018801	PYM1	92	67.380	Cercocebus_atys
ENSRNOG00000049415	AABR07055413.1	91	63.636	ENSCLAG00000007964	PYM1	92	63.636	Chinchilla_lanigera
ENSRNOG00000049415	AABR07055413.1	85	60.452	ENSCSAG00000005291	PYM1	90	65.909	Chlorocebus_sabaeus
ENSRNOG00000049415	AABR07055413.1	55	40.000	ENSCING00000006448	-	79	37.725	Ciona_intestinalis
ENSRNOG00000049415	AABR07055413.1	97	30.275	ENSCSAVG00000009805	-	75	35.714	Ciona_savignyi
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSCANG00000020338	-	92	67.380	Colobus_angolensis_palliatus
ENSRNOG00000049415	AABR07055413.1	97	56.784	ENSCANG00000019757	-	87	62.827	Colobus_angolensis_palliatus
ENSRNOG00000049415	AABR07055413.1	91	71.505	ENSCGRG00001018051	-	92	71.505	Cricetulus_griseus_chok1gshd
ENSRNOG00000049415	AABR07055413.1	87	59.429	ENSCGRG00001004231	-	87	61.932	Cricetulus_griseus_chok1gshd
ENSRNOG00000049415	AABR07055413.1	87	59.429	ENSCGRG00000018933	-	87	61.932	Cricetulus_griseus_crigri
ENSRNOG00000049415	AABR07055413.1	91	71.505	ENSCGRG00000012495	-	92	71.505	Cricetulus_griseus_crigri
ENSRNOG00000049415	AABR07055413.1	94	44.608	ENSCVAG00000017360	pym1	68	50.000	Cyprinodon_variegatus
ENSRNOG00000049415	AABR07055413.1	98	46.701	ENSDARG00000046024	pym1	91	48.087	Danio_rerio
ENSRNOG00000049415	AABR07055413.1	94	57.513	ENSDNOG00000048414	PYM1	86	62.500	Dasypus_novemcinctus
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSDORG00000029448	Pym1	92	66.845	Dipodomys_ordii
ENSRNOG00000049415	AABR07055413.1	85	53.409	ENSETEG00000004461	-	91	58.857	Echinops_telfairi
ENSRNOG00000049415	AABR07055413.1	91	57.754	ENSEASG00005002271	PYM1	84	62.903	Equus_asinus_asinus
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSECAG00000011870	PYM1	92	67.380	Equus_caballus
ENSRNOG00000049415	AABR07055413.1	51	58.252	ENSELUG00000024250	pym1	92	44.330	Esox_lucius
ENSRNOG00000049415	AABR07055413.1	91	61.702	ENSFCAG00000013967	PYM1	92	66.845	Felis_catus
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSFDAG00000006314	PYM1	92	67.380	Fukomys_damarensis
ENSRNOG00000049415	AABR07055413.1	58	59.167	ENSFHEG00000005884	pym1	92	46.465	Fundulus_heteroclitus
ENSRNOG00000049415	AABR07055413.1	81	48.824	ENSGMOG00000007239	pym1	78	48.824	Gadus_morhua
ENSRNOG00000049415	AABR07055413.1	82	57.317	ENSGALG00000046169	PYM1	79	57.317	Gallus_gallus
ENSRNOG00000049415	AABR07055413.1	98	41.860	ENSGAFG00000003280	pym1	92	45.500	Gambusia_affinis
ENSRNOG00000049415	AABR07055413.1	100	42.500	ENSGACG00000010703	pym1	78	51.515	Gasterosteus_aculeatus
ENSRNOG00000049415	AABR07055413.1	51	65.049	ENSGAGG00000001973	PYM1	88	46.798	Gopherus_agassizii
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSGGOG00000043246	PYM1	92	67.914	Gorilla_gorilla
ENSRNOG00000049415	AABR07055413.1	51	61.538	ENSHBUG00000012719	pym1	80	50.296	Haplochromis_burtoni
ENSRNOG00000049415	AABR07055413.1	94	61.658	ENSHGLG00000017155	PYM1	94	66.667	Heterocephalus_glaber_female
ENSRNOG00000049415	AABR07055413.1	94	61.658	ENSHGLG00100015341	PYM1	94	66.667	Heterocephalus_glaber_male
ENSRNOG00000049415	AABR07055413.1	98	47.317	ENSHCOG00000007987	pym1	68	51.515	Hippocampus_comes
ENSRNOG00000049415	AABR07055413.1	100	43.204	ENSIPUG00000005975	wibga	92	44.444	Ictalurus_punctatus
ENSRNOG00000049415	AABR07055413.1	91	63.298	ENSSTOG00000014206	PYM1	92	68.449	Ictidomys_tridecemlineatus
ENSRNOG00000049415	AABR07055413.1	91	61.081	ENSJJAG00000013338	Pym1	92	66.310	Jaculus_jaculus
ENSRNOG00000049415	AABR07055413.1	98	42.081	ENSKMAG00000006351	pym1	81	46.774	Kryptolebias_marmoratus
ENSRNOG00000049415	AABR07055413.1	98	43.541	ENSLBEG00000015707	pym1	79	54.491	Labrus_bergylta
ENSRNOG00000049415	AABR07055413.1	85	45.213	ENSLACG00000014398	PYM1	75	51.852	Latimeria_chalumnae
ENSRNOG00000049415	AABR07055413.1	91	59.574	ENSLAFG00000002369	PYM1	92	64.706	Loxodonta_africana
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSMFAG00000003048	PYM1	92	67.380	Macaca_fascicularis
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSMMUG00000011002	PYM1	92	67.380	Macaca_mulatta
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSMNEG00000034677	PYM1	92	67.380	Macaca_nemestrina
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSMLEG00000007971	PYM1	92	67.380	Mandrillus_leucophaeus
ENSRNOG00000049415	AABR07055413.1	98	39.631	ENSMAMG00000001588	pym1	80	49.153	Mastacembelus_armatus
ENSRNOG00000049415	AABR07055413.1	51	61.538	ENSMZEG00005026458	pym1	80	49.704	Maylandia_zebra
ENSRNOG00000049415	AABR07055413.1	94	69.634	ENSMAUG00000007318	Pym1	94	69.634	Mesocricetus_auratus
ENSRNOG00000049415	AABR07055413.1	91	60.106	ENSMICG00000032962	PYM1	92	65.241	Microcebus_murinus
ENSRNOG00000049415	AABR07055413.1	91	68.817	ENSMOCG00000010208	Pym1	92	69.189	Microtus_ochrogaster
ENSRNOG00000049415	AABR07055413.1	98	44.041	ENSMMOG00000009301	pym1	77	52.795	Mola_mola
ENSRNOG00000049415	AABR07055413.1	98	40.566	ENSMALG00000013496	pym1	80	48.824	Monopterus_albus
ENSRNOG00000049415	AABR07055413.1	94	72.775	MGP_CAROLIEiJ_G0015953	Pym1	94	72.775	Mus_caroli
ENSRNOG00000049415	AABR07055413.1	94	70.681	ENSMUSG00000064030	Pym1	94	70.681	Mus_musculus
ENSRNOG00000049415	AABR07055413.1	94	71.728	MGP_PahariEiJ_G0031131	Pym1	94	71.728	Mus_pahari
ENSRNOG00000049415	AABR07055413.1	94	71.204	MGP_SPRETEiJ_G0016778	Pym1	94	71.204	Mus_spretus
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSMPUG00000000931	PYM1	92	67.380	Mustela_putorius_furo
ENSRNOG00000049415	AABR07055413.1	94	53.368	ENSMLUG00000003586	PYM1	94	58.333	Myotis_lucifugus
ENSRNOG00000049415	AABR07055413.1	85	61.017	ENSNGAG00000019207	Pym1	85	66.477	Nannospalax_galili
ENSRNOG00000049415	AABR07055413.1	98	44.076	ENSNBRG00000006951	pym1	80	50.296	Neolamprologus_brichardi
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSNLEG00000017588	PYM1	92	67.914	Nomascus_leucogenys
ENSRNOG00000049415	AABR07055413.1	85	55.932	ENSMEUG00000001017	PYM1	91	60.920	Notamacropus_eugenii
ENSRNOG00000049415	AABR07055413.1	85	58.757	ENSOPRG00000007797	PYM1	86	64.205	Ochotona_princeps
ENSRNOG00000049415	AABR07055413.1	91	61.702	ENSODEG00000004289	PYM1	92	66.845	Octodon_degus
ENSRNOG00000049415	AABR07055413.1	51	57.944	ENSONIG00000016740	pym1	80	49.419	Oreochromis_niloticus
ENSRNOG00000049415	AABR07055413.1	85	60.452	ENSOCUG00000025969	PYM1	78	65.909	Oryctolagus_cuniculus
ENSRNOG00000049415	AABR07055413.1	99	45.498	ENSORLG00000030592	pym1	79	53.801	Oryzias_latipes
ENSRNOG00000049415	AABR07055413.1	99	44.601	ENSORLG00020011264	pym1	79	52.023	Oryzias_latipes_hni
ENSRNOG00000049415	AABR07055413.1	99	45.714	ENSORLG00015005287	pym1	79	54.118	Oryzias_latipes_hsok
ENSRNOG00000049415	AABR07055413.1	98	45.673	ENSOMEG00000022250	pym1	79	49.432	Oryzias_melastigma
ENSRNOG00000049415	AABR07055413.1	87	58.564	ENSOGAG00000007038	PYM1	88	63.889	Otolemur_garnettii
ENSRNOG00000049415	AABR07055413.1	91	59.574	ENSOARG00000010856	PYM1	92	64.706	Ovis_aries
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSPPAG00000043630	PYM1	92	67.914	Pan_paniscus
ENSRNOG00000049415	AABR07055413.1	91	60.638	ENSPPRG00000013243	PYM1	92	65.775	Panthera_pardus
ENSRNOG00000049415	AABR07055413.1	91	60.638	ENSPTIG00000017380	PYM1	92	65.775	Panthera_tigris_altaica
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSPTRG00000005067	PYM1	92	67.914	Pan_troglodytes
ENSRNOG00000049415	AABR07055413.1	91	61.702	ENSPANG00000009562	PYM1	92	66.845	Papio_anubis
ENSRNOG00000049415	AABR07055413.1	100	50.000	ENSPKIG00000006301	pym1	79	53.571	Paramormyrops_kingsleyae
ENSRNOG00000049415	AABR07055413.1	100	43.204	ENSPMGG00000023161	pym1	91	49.189	Periophthalmus_magnuspinnatus
ENSRNOG00000049415	AABR07055413.1	91	68.817	ENSPEMG00000009372	Pym1	92	68.817	Peromyscus_maniculatus_bairdii
ENSRNOG00000049415	AABR07055413.1	89	55.135	ENSPCIG00000024658	PYM1	89	59.563	Phascolarctos_cinereus
ENSRNOG00000049415	AABR07055413.1	98	44.231	ENSPFOG00000008193	pym1	79	51.807	Poecilia_formosa
ENSRNOG00000049415	AABR07055413.1	98	42.723	ENSPLAG00000009228	pym1	80	50.292	Poecilia_latipinna
ENSRNOG00000049415	AABR07055413.1	98	42.723	ENSPMEG00000001505	pym1	80	50.292	Poecilia_mexicana
ENSRNOG00000049415	AABR07055413.1	85	67.045	ENSPPYG00000004635	PYM1	90	67.045	Pongo_abelii
ENSRNOG00000049415	AABR07055413.1	91	60.638	ENSPCOG00000019706	PYM1	92	65.775	Propithecus_coquereli
ENSRNOG00000049415	AABR07055413.1	88	59.890	ENSPVAG00000011437	PYM1	89	67.045	Pteropus_vampyrus
ENSRNOG00000049415	AABR07055413.1	51	61.538	ENSPNYG00000012871	pym1	80	50.595	Pundamilia_nyererei
ENSRNOG00000049415	AABR07055413.1	98	47.596	ENSPNAG00000018833	pym1	79	52.976	Pygocentrus_nattereri
ENSRNOG00000049415	AABR07055413.1	91	57.447	ENSRBIG00000033362	PYM1	91	62.567	Rhinopithecus_bieti
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSRROG00000043620	PYM1	92	67.380	Rhinopithecus_roxellana
ENSRNOG00000049415	AABR07055413.1	91	62.234	ENSSBOG00000029393	PYM1	92	67.380	Saimiri_boliviensis_boliviensis
ENSRNOG00000049415	AABR07055413.1	91	57.979	ENSSHAG00000008280	PYM1	92	62.366	Sarcophilus_harrisii
ENSRNOG00000049415	AABR07055413.1	82	51.553	ENSSFOG00015021475	pym1	78	51.553	Scleropages_formosus
ENSRNOG00000049415	AABR07055413.1	98	48.293	ENSSMAG00000020912	pym1	79	53.049	Scophthalmus_maximus
ENSRNOG00000049415	AABR07055413.1	98	40.654	ENSSDUG00000001807	pym1	80	50.581	Seriola_dumerili
ENSRNOG00000049415	AABR07055413.1	98	41.667	ENSSLDG00000013730	pym1	79	51.852	Seriola_lalandi_dorsalis
ENSRNOG00000049415	AABR07055413.1	85	58.757	ENSSARG00000009569	PYM1	92	63.842	Sorex_araneus
ENSRNOG00000049415	AABR07055413.1	88	49.198	ENSSPUG00000015059	PYM1	90	49.198	Sphenodon_punctatus
ENSRNOG00000049415	AABR07055413.1	98	46.512	ENSSPAG00000020100	pym1	80	51.724	Stegastes_partitus
ENSRNOG00000049415	AABR07055413.1	91	61.170	ENSSSCG00000040825	PYM1	92	66.310	Sus_scrofa
ENSRNOG00000049415	AABR07055413.1	98	38.835	ENSTRUG00000021367	pym1	80	48.780	Takifugu_rubripes
ENSRNOG00000049415	AABR07055413.1	88	56.044	ENSTBEG00000004208	PYM1	94	61.326	Tupaia_belangeri
ENSRNOG00000049415	AABR07055413.1	85	59.887	ENSTTRG00000014971	PYM1	89	65.341	Tursiops_truncatus
ENSRNOG00000049415	AABR07055413.1	91	68.984	ENSUAMG00000014521	PYM1	92	68.984	Ursus_americanus
ENSRNOG00000049415	AABR07055413.1	91	65.054	ENSUMAG00000016241	PYM1	82	65.574	Ursus_maritimus
ENSRNOG00000049415	AABR07055413.1	91	62.766	ENSVVUG00000022749	PYM1	92	67.914	Vulpes_vulpes
ENSRNOG00000049415	AABR07055413.1	94	48.020	ENSXETG00000021850	pym1	94	48.223	Xenopus_tropicalis
ENSRNOG00000049415	AABR07055413.1	98	42.254	ENSXMAG00000011649	pym1	92	46.465	Xiphophorus_maculatus