EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000049504 (Gene tree)
Gene ID: -
Gene Symbol: AABR07009221.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5504 bases
Position: chr2:89254154-89259657
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000069158	RVT_1	PF00078.27	2.7e-54	1	1
ENSRNOP00000069158	Transposase_22	PF02994.14	1.2e-46	1	1
ENSRNOP00000069158	Exo_endo_phos	PF03372.23	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000073391	AABR07009221.1-201	5115	-	ENSRNOP00000069158	1705 (aa)	-	A0A0G2JUM9

Gene Model

Click here to download ENSRNOG00000049504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000049504	AABR07009221.1	96	97.733	ENSRNOG00000058209	AABR07063893.1	100	97.733
ENSRNOG00000049504	AABR07009221.1	94	98.010	ENSRNOG00000056748	AC229945.1	100	98.010
ENSRNOG00000049504	AABR07009221.1	100	97.428	ENSRNOG00000059691	AABR07033318.1	100	97.428
ENSRNOG00000049504	AABR07009221.1	61	94.517	ENSRNOG00000060618	AABR07027267.1	75	99.448
ENSRNOG00000049504	AABR07009221.1	59	99.480	ENSRNOG00000057039	AC124874.1	92	99.480
ENSRNOG00000049504	AABR07009221.1	60	93.834	ENSRNOG00000058277	AC080157.1	75	98.864
ENSRNOG00000049504	AABR07009221.1	95	97.957	ENSRNOG00000047294	AABR07043115.1	100	97.957
ENSRNOG00000049504	AABR07009221.1	54	96.112	ENSRNOG00000005861	Hsd11b1	81	96.112
ENSRNOG00000049504	AABR07009221.1	61	92.973	ENSRNOG00000034030	AC130162.1	78	92.973
ENSRNOG00000049504	AABR07009221.1	96	97.730	ENSRNOG00000060742	AABR07029809.1	100	97.730
ENSRNOG00000049504	AABR07009221.1	97	97.292	ENSRNOG00000059133	AABR07020537.1	100	97.292
ENSRNOG00000049504	AABR07009221.1	59	93.834	ENSRNOG00000045583	AABR07002068.1	75	98.864
ENSRNOG00000049504	AABR07009221.1	98	98.376	ENSRNOG00000056033	AC111632.2	100	98.376
ENSRNOG00000049504	AABR07009221.1	100	97.838	ENSRNOG00000054519	AABR07053179.1	100	97.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049504	AABR07009221.1	50	65.023	ENSBTAG00000050251	-	99	65.023	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	52	66.065	ENSBTAG00000049728	-	99	66.065	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	50	67.347	ENSBTAG00000052305	-	89	67.347	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	52	65.533	ENSBTAG00000051121	-	99	65.533	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	69	63.522	ENSBTAG00000050847	-	92	63.522	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	65	63.432	ENSBTAG00000053324	-	93	63.432	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	69	63.522	ENSBTAG00000050912	-	92	63.522	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	61	74.194	ENSBTAG00000050735	-	92	74.194	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	50	65.570	ENSBTAG00000051119	-	98	65.570	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	67	76.471	ENSBTAG00000053171	-	93	76.471	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	69	63.612	ENSBTAG00000053316	-	92	63.612	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	69	63.432	ENSBTAG00000050965	-	92	63.432	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	50	65.570	ENSBTAG00000054826	-	98	65.570	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	69	63.432	ENSBTAG00000051842	-	92	63.645	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	63	64.208	ENSBTAG00000049055	-	92	64.208	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	69	63.702	ENSBTAG00000049649	-	92	63.702	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	60	64.208	ENSBTAG00000054392	-	97	64.208	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	60	64.071	ENSBTAG00000054175	-	91	64.071	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	54	65.804	ENSBTAG00000055052	-	99	65.804	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	60	64.486	ENSBTAG00000050534	-	91	64.486	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	65	63.702	ENSBTAG00000051208	-	92	63.702	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	50	65.658	ENSBTAG00000051999	-	99	65.658	Bos_taurus
ENSRNOG00000049504	AABR07009221.1	53	66.507	ENSCHIG00000008419	-	90	66.507	Capra_hircus
ENSRNOG00000049504	AABR07009221.1	51	66.708	ENSCHIG00000008599	-	90	66.708	Capra_hircus
ENSRNOG00000049504	AABR07009221.1	69	75.313	ENSCGRG00000019476	-	93	75.313	Cricetulus_griseus_crigri
ENSRNOG00000049504	AABR07009221.1	69	75.313	ENSCGRG00000019173	-	92	75.313	Cricetulus_griseus_crigri
ENSRNOG00000049504	AABR07009221.1	66	75.313	ENSCGRG00000018650	-	90	75.313	Cricetulus_griseus_crigri
ENSRNOG00000049504	AABR07009221.1	69	75.313	ENSCGRG00000018654	-	92	75.313	Cricetulus_griseus_crigri
ENSRNOG00000049504	AABR07009221.1	64	75.725	ENSCGRG00000019462	-	92	75.725	Cricetulus_griseus_crigri
ENSRNOG00000049504	AABR07009221.1	61	62.906	ENSOCUG00000029631	-	99	62.906	Oryctolagus_cuniculus
ENSRNOG00000049504	AABR07009221.1	61	64.640	ENSOCUG00000029721	-	91	64.640	Oryctolagus_cuniculus
ENSRNOG00000049504	AABR07009221.1	69	63.612	ENSOARG00000001175	-	92	63.824	Ovis_aries
ENSRNOG00000049504	AABR07009221.1	54	63.617	ENSOARG00000011096	-	84	63.617	Ovis_aries
ENSRNOG00000049504	AABR07009221.1	63	64.110	ENSOARG00000005813	-	92	64.110	Ovis_aries
ENSRNOG00000049504	AABR07009221.1	63	64.059	ENSOARG00000008210	-	89	64.059	Ovis_aries
ENSRNOG00000049504	AABR07009221.1	69	63.612	ENSOARG00000000057	-	92	63.824	Ovis_aries
ENSRNOG00000049504	AABR07009221.1	69	63.702	ENSOARG00000010889	-	92	63.914	Ovis_aries
ENSRNOG00000049504	AABR07009221.1	69	64.209	ENSSSCG00000039414	-	92	64.209	Sus_scrofa
ENSRNOG00000049504	AABR07009221.1	52	65.119	ENSSSCG00000035697	-	91	65.119	Sus_scrofa
ENSRNOG00000049504	AABR07009221.1	51	66.873	ENSSSCG00000040911	-	88	66.873	Sus_scrofa
ENSRNOG00000049504	AABR07009221.1	65	64.029	ENSSSCG00000036442	-	95	63.996	Sus_scrofa
ENSRNOG00000049504	AABR07009221.1	69	65.574	ENSSSCG00000040939	-	92	65.574	Sus_scrofa