EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000049511 (Gene tree)
Gene ID: -
Gene Symbol: AABR07066522.1
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 18675 bases
Position: chr9:10471742-10490416
Accession: 301126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000064994	RRM_1	PF00076.22	1.8e-12	1	1
ENSRNOP00000064994	SAP	PF02037.27	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072276	AABR07066522.1-201	2370	XM_002730092	ENSRNOP00000064994	790 (aa)	-	M0R6E6

Gene Model

Click here to download ENSRNOG00000049511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000049511	AABR07066522.1	99	66.334	ENSRNOG00000050543	Safb	85	65.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049511	AABR07066522.1	100	67.476	ENSG00000130254	SAFB2	82	69.417	Homo_sapiens
ENSRNOG00000049511	AABR07066522.1	99	68.159	ENSAMEG00000012146	SAFB2	82	67.482	Ailuropoda_melanoleuca
ENSRNOG00000049511	AABR07066522.1	100	67.597	ENSANAG00000031936	SAFB2	82	69.539	Aotus_nancymaae
ENSRNOG00000049511	AABR07066522.1	99	64.957	ENSBTAG00000001790	SAFB2	82	66.789	Bos_taurus
ENSRNOG00000049511	AABR07066522.1	100	68.485	ENSCAFG00000018814	SAFB2	82	69.333	Canis_familiaris
ENSRNOG00000049511	AABR07066522.1	100	68.485	ENSCAFG00020018939	SAFB2	82	69.333	Canis_lupus_dingo
ENSRNOG00000049511	AABR07066522.1	99	64.835	ENSCHIG00000024547	SAFB2	82	66.667	Capra_hircus
ENSRNOG00000049511	AABR07066522.1	94	55.714	ENSCAPG00000011771	SAFB2	81	57.458	Cavia_aperea
ENSRNOG00000049511	AABR07066522.1	99	66.102	ENSCPOG00000011394	SAFB2	81	68.402	Cavia_porcellus
ENSRNOG00000049511	AABR07066522.1	100	66.748	ENSCCAG00000017348	SAFB2	82	68.689	Cebus_capucinus
ENSRNOG00000049511	AABR07066522.1	98	67.367	ENSCATG00000039497	SAFB2	81	69.345	Cercocebus_atys
ENSRNOG00000049511	AABR07066522.1	100	67.597	ENSCSAG00000009959	SAFB2	82	69.539	Chlorocebus_sabaeus
ENSRNOG00000049511	AABR07066522.1	90	57.965	ENSCHOG00000010684	SAFB2	92	73.932	Choloepus_hoffmanni
ENSRNOG00000049511	AABR07066522.1	100	63.714	ENSCANG00000024675	SAFB2	82	65.054	Colobus_angolensis_palliatus
ENSRNOG00000049511	AABR07066522.1	99	78.069	ENSCGRG00001015833	Safb2	83	78.495	Cricetulus_griseus_chok1gshd
ENSRNOG00000049511	AABR07066522.1	99	78.069	ENSCGRG00000011131	Safb2	83	78.495	Cricetulus_griseus_crigri
ENSRNOG00000049511	AABR07066522.1	57	60.691	ENSDNOG00000045791	-	96	60.691	Dasypus_novemcinctus
ENSRNOG00000049511	AABR07066522.1	99	63.725	ENSDORG00000016199	Safb2	84	65.564	Dipodomys_ordii
ENSRNOG00000049511	AABR07066522.1	87	67.131	ENSEASG00005022952	SAFB2	84	67.660	Equus_asinus_asinus
ENSRNOG00000049511	AABR07066522.1	99	67.525	ENSECAG00000018978	SAFB2	86	67.971	Equus_caballus
ENSRNOG00000049511	AABR07066522.1	100	67.354	ENSFCAG00000011834	SAFB2	83	69.417	Felis_catus
ENSRNOG00000049511	AABR07066522.1	90	66.872	ENSFDAG00000020009	SAFB2	83	66.510	Fukomys_damarensis
ENSRNOG00000049511	AABR07066522.1	99	68.127	ENSGGOG00000015093	SAFB2	81	68.428	Gorilla_gorilla
ENSRNOG00000049511	AABR07066522.1	100	72.209	ENSHGLG00000017442	SAFB2	83	72.573	Heterocephalus_glaber_female
ENSRNOG00000049511	AABR07066522.1	100	69.779	ENSLAFG00000003836	SAFB2	83	69.779	Loxodonta_africana
ENSRNOG00000049511	AABR07066522.1	100	67.476	ENSMFAG00000039706	SAFB2	82	69.417	Macaca_fascicularis
ENSRNOG00000049511	AABR07066522.1	100	68.199	ENSMMUG00000017968	SAFB2	86	66.748	Macaca_mulatta
ENSRNOG00000049511	AABR07066522.1	100	63.346	ENSMNEG00000032042	SAFB2	82	64.692	Macaca_nemestrina
ENSRNOG00000049511	AABR07066522.1	100	67.476	ENSMLEG00000034562	SAFB2	82	69.417	Mandrillus_leucophaeus
ENSRNOG00000049511	AABR07066522.1	74	85.437	ENSMAUG00000011573	Safb2	74	86.165	Mesocricetus_auratus
ENSRNOG00000049511	AABR07066522.1	100	67.961	ENSMICG00000008711	SAFB2	82	68.325	Microcebus_murinus
ENSRNOG00000049511	AABR07066522.1	99	77.751	ENSMOCG00000006827	Safb2	84	77.632	Microtus_ochrogaster
ENSRNOG00000049511	AABR07066522.1	99	59.662	ENSMODG00000001178	SAFB2	83	59.330	Monodelphis_domestica
ENSRNOG00000049511	AABR07066522.1	100	82.938	MGP_CAROLIEiJ_G0021779	Safb2	94	80.952	Mus_caroli
ENSRNOG00000049511	AABR07066522.1	100	82.820	ENSMUSG00000042625	Safb2	94	82.738	Mus_musculus
ENSRNOG00000049511	AABR07066522.1	100	82.464	MGP_PahariEiJ_G0020768	Safb2	93	82.036	Mus_pahari
ENSRNOG00000049511	AABR07066522.1	90	79.496	MGP_SPRETEiJ_G0022690	Safb2	94	82.143	Mus_spretus
ENSRNOG00000049511	AABR07066522.1	100	68.970	ENSMPUG00000006106	SAFB2	76	69.455	Mustela_putorius_furo
ENSRNOG00000049511	AABR07066522.1	100	67.072	ENSMLUG00000001050	SAFB2	82	68.171	Myotis_lucifugus
ENSRNOG00000049511	AABR07066522.1	100	67.112	ENSNLEG00000013514	SAFB2	82	69.053	Nomascus_leucogenys
ENSRNOG00000049511	AABR07066522.1	94	54.955	ENSMEUG00000002456	SAFB2	83	55.727	Notamacropus_eugenii
ENSRNOG00000049511	AABR07066522.1	97	61.827	ENSOPRG00000011523	-	79	61.827	Ochotona_princeps
ENSRNOG00000049511	AABR07066522.1	99	67.853	ENSODEG00000014751	SAFB2	81	69.448	Octodon_degus
ENSRNOG00000049511	AABR07066522.1	57	42.241	ENSOANG00000011319	-	93	42.457	Ornithorhynchus_anatinus
ENSRNOG00000049511	AABR07066522.1	53	44.130	ENSOANG00000013644	-	100	44.130	Ornithorhynchus_anatinus
ENSRNOG00000049511	AABR07066522.1	59	59.667	ENSOCUG00000001592	-	95	60.521	Oryctolagus_cuniculus
ENSRNOG00000049511	AABR07066522.1	100	69.155	ENSOGAG00000006855	SAFB2	82	69.645	Otolemur_garnettii
ENSRNOG00000049511	AABR07066522.1	99	60.050	ENSOARG00000007982	SAFB2	83	61.710	Ovis_aries
ENSRNOG00000049511	AABR07066522.1	100	67.597	ENSPPAG00000043392	SAFB2	82	69.539	Pan_paniscus
ENSRNOG00000049511	AABR07066522.1	100	67.233	ENSPPRG00000011310	SAFB2	83	69.296	Panthera_pardus
ENSRNOG00000049511	AABR07066522.1	80	80.000	ENSPTIG00000015120	SAFB2	72	80.000	Panthera_tigris_altaica
ENSRNOG00000049511	AABR07066522.1	100	63.592	ENSPTRG00000010334	SAFB2	81	63.882	Pan_troglodytes
ENSRNOG00000049511	AABR07066522.1	100	67.354	ENSPANG00000007004	SAFB2	82	69.296	Papio_anubis
ENSRNOG00000049511	AABR07066522.1	99	77.712	ENSPEMG00000016015	Safb2	82	77.897	Peromyscus_maniculatus_bairdii
ENSRNOG00000049511	AABR07066522.1	53	71.594	ENSPCIG00000009518	-	87	72.748	Phascolarctos_cinereus
ENSRNOG00000049511	AABR07066522.1	100	67.597	ENSPPYG00000009427	SAFB2	82	69.539	Pongo_abelii
ENSRNOG00000049511	AABR07066522.1	99	65.488	ENSPCAG00000006352	SAFB2	82	66.585	Procavia_capensis
ENSRNOG00000049511	AABR07066522.1	100	68.512	ENSPCOG00000023260	SAFB2	82	68.881	Propithecus_coquereli
ENSRNOG00000049511	AABR07066522.1	62	80.435	ENSPVAG00000004902	-	72	80.435	Pteropus_vampyrus
ENSRNOG00000049511	AABR07066522.1	76	74.699	ENSRBIG00000033446	SAFB2	78	79.518	Rhinopithecus_bieti
ENSRNOG00000049511	AABR07066522.1	100	67.476	ENSRROG00000006606	SAFB2	82	69.417	Rhinopithecus_roxellana
ENSRNOG00000049511	AABR07066522.1	100	66.990	ENSSBOG00000032315	SAFB2	87	69.175	Saimiri_boliviensis_boliviensis
ENSRNOG00000049511	AABR07066522.1	98	59.012	ENSSHAG00000012703	SAFB2	82	59.259	Sarcophilus_harrisii
ENSRNOG00000049511	AABR07066522.1	76	60.948	ENSSARG00000000649	SAFB2	78	63.458	Sorex_araneus
ENSRNOG00000049511	AABR07066522.1	99	67.561	ENSSSCG00000013523	SAFB2	90	69.878	Sus_scrofa
ENSRNOG00000049511	AABR07066522.1	75	84.000	ENSTBEG00000012709	SAFB2	60	84.000	Tupaia_belangeri
ENSRNOG00000049511	AABR07066522.1	88	65.295	ENSTTRG00000013585	SAFB2	72	65.706	Tursiops_truncatus
ENSRNOG00000049511	AABR07066522.1	100	67.354	ENSUAMG00000024695	SAFB2	81	69.175	Ursus_americanus
ENSRNOG00000049511	AABR07066522.1	97	57.881	ENSUMAG00000009585	SAFB2	72	66.132	Ursus_maritimus
ENSRNOG00000049511	AABR07066522.1	86	83.108	ENSVPAG00000012041	SAFB2	83	83.108	Vicugna_pacos
ENSRNOG00000049511	AABR07066522.1	100	68.727	ENSVVUG00000013695	SAFB2	76	75.758	Vulpes_vulpes