EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000049598 (Gene tree)
Gene ID: 100912571
Gene Symbol: LOC100912571
Alias: -
Full Name: eukaryotic translation initiation factor 4 gamma 1-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 6968 bases
Position: chr11:82886878-82893845
Accession: 6486329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000067492	MA3	PF02847.17	6.8e-29	1	1
ENSRNOP00000067492	W2	PF02020.18	3.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000075306	-	1593	XM_006248555	ENSRNOP00000067492	530 (aa)	XP_006248617	M0RD03

Gene Model

Click here to download ENSRNOG00000049598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049598	LOC100912571	100	89.888	ENSG00000114867	EIF4G1	92	90.303	Homo_sapiens
ENSRNOG00000049598	LOC100912571	94	62.178	ENSACIG00000020879	EIF4G1	79	64.372	Amphilophus_citrinellus
ENSRNOG00000049598	LOC100912571	96	66.355	ENSAPLG00000008628	EIF4G1	67	66.355	Anas_platyrhynchos
ENSRNOG00000049598	LOC100912571	99	58.439	ENSCSEG00000016729	-	81	56.262	Cynoglossus_semilaevis
ENSRNOG00000049598	LOC100912571	68	66.209	ENSDARG00000116712	CABZ01061894.1	86	65.684	Danio_rerio
ENSRNOG00000049598	LOC100912571	100	80.263	ENSHGLG00000008713	-	82	80.075	Heterocephalus_glaber_female
ENSRNOG00000049598	LOC100912571	98	55.019	ENSHCOG00000016075	EIF4G1	77	58.170	Hippocampus_comes
ENSRNOG00000049598	LOC100912571	93	57.895	ENSLBEG00000018553	-	82	60.956	Labrus_bergylta
ENSRNOG00000049598	LOC100912571	99	58.161	ENSMMOG00000018912	-	81	59.287	Mola_mola
ENSRNOG00000049598	LOC100912571	99	58.195	ENSMMOG00000018909	-	85	57.934	Mola_mola
ENSRNOG00000049598	LOC100912571	99	59.404	ENSMALG00000021564	EIF4G1	83	58.101	Monopterus_albus
ENSRNOG00000049598	LOC100912571	89	60.251	ENSOANG00000005781	-	61	60.251	Ornithorhynchus_anatinus
ENSRNOG00000049598	LOC100912571	65	72.222	ENSPSIG00000016626	-	100	72.222	Pelodiscus_sinensis
ENSRNOG00000049598	LOC100912571	99	58.912	ENSPMGG00000014145	-	81	58.724	Periophthalmus_magnuspinnatus
ENSRNOG00000049598	LOC100912571	99	53.650	ENSPREG00000003139	-	78	53.394	Poecilia_reticulata
ENSRNOG00000049598	LOC100912571	80	66.513	ENSPNAG00000018237	eif4g1a	82	61.152	Pygocentrus_nattereri
ENSRNOG00000049598	LOC100912571	100	90.075	ENSRROG00000004376	EIF4G1	83	84.530	Rhinopithecus_roxellana
ENSRNOG00000049598	LOC100912571	99	58.087	ENSSMAG00000000192	-	78	54.228	Scophthalmus_maximus
ENSRNOG00000049598	LOC100912571	72	67.183	ENSSPAG00000021450	-	69	67.448	Stegastes_partitus
ENSRNOG00000049598	LOC100912571	70	66.227	ENSTRUG00000005806	-	67	67.546	Takifugu_rubripes
ENSRNOG00000049598	LOC100912571	95	51.667	ENSTRUG00000011275	-	75	51.724	Takifugu_rubripes
ENSRNOG00000049598	LOC100912571	99	55.595	ENSXCOG00000014587	-	83	51.376	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0006413	translational initiation	-	IEA	Process
GO:0016281	eukaryotic translation initiation factor 4F complex	21873635.	IBA	Component