EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000049686 (Gene tree)
Gene ID: 287962
Gene Symbol: Mrpl40
Alias: L40mt|MRP-L40
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5836 bases
Position: chr11:86276616-86282451
Accession: 1565444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000065376	MRP-L28	PF09812.9	8.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000071159	-	2401	-	ENSRNOP00000065376	206 (aa)	-	P83565

Gene Model

Click here to download ENSRNOG00000049686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049686	Mrpl40	100	76.214	ENSG00000185608	MRPL40	100	76.214	Homo_sapiens
ENSRNOG00000049686	Mrpl40	82	60.714	ENSAPOG00000021291	mrpl40	82	60.714	Acanthochromis_polyacanthus
ENSRNOG00000049686	Mrpl40	100	76.214	ENSAMEG00000011421	MRPL40	100	76.214	Ailuropoda_melanoleuca
ENSRNOG00000049686	Mrpl40	59	54.545	ENSACIG00000006717	MRPL40	74	50.676	Amphilophus_citrinellus
ENSRNOG00000049686	Mrpl40	98	51.942	ENSACIG00000006672	mrpl40	99	51.942	Amphilophus_citrinellus
ENSRNOG00000049686	Mrpl40	82	59.524	ENSAOCG00000003216	mrpl40	82	59.524	Amphiprion_ocellaris
ENSRNOG00000049686	Mrpl40	82	58.929	ENSAPEG00000017401	mrpl40	82	58.929	Amphiprion_percula
ENSRNOG00000049686	Mrpl40	75	63.226	ENSATEG00000020753	mrpl40	91	63.226	Anabas_testudineus
ENSRNOG00000049686	Mrpl40	98	54.455	ENSAPLG00000004002	MRPL40	100	55.446	Anas_platyrhynchos
ENSRNOG00000049686	Mrpl40	95	54.822	ENSACAG00000001053	MRPL40	98	54.822	Anolis_carolinensis
ENSRNOG00000049686	Mrpl40	100	77.184	ENSANAG00000026579	MRPL40	100	77.184	Aotus_nancymaae
ENSRNOG00000049686	Mrpl40	98	51.961	ENSACLG00000011106	mrpl40	100	51.961	Astatotilapia_calliptera
ENSRNOG00000049686	Mrpl40	97	52.764	ENSAMXG00000029691	mrpl40	97	52.764	Astyanax_mexicanus
ENSRNOG00000049686	Mrpl40	94	71.134	ENSBTAG00000019891	MRPL40	100	70.388	Bos_taurus
ENSRNOG00000049686	Mrpl40	73	33.125	WBGene00018793	mrpl-40	83	33.125	Caenorhabditis_elegans
ENSRNOG00000049686	Mrpl40	100	77.778	ENSCJAG00000001584	MRPL40	100	77.778	Callithrix_jacchus
ENSRNOG00000049686	Mrpl40	100	76.214	ENSCAFG00020007995	MRPL40	100	76.214	Canis_lupus_dingo
ENSRNOG00000049686	Mrpl40	77	64.557	ENSCHIG00000026872	-	100	64.118	Capra_hircus
ENSRNOG00000049686	Mrpl40	93	70.312	ENSCHIG00000000131	-	100	69.903	Capra_hircus
ENSRNOG00000049686	Mrpl40	100	76.699	ENSTSYG00000014747	MRPL40	100	76.699	Carlito_syrichta
ENSRNOG00000049686	Mrpl40	69	83.217	ENSCAPG00000012876	MRPL40	100	83.217	Cavia_aperea
ENSRNOG00000049686	Mrpl40	99	79.024	ENSCPOG00000026802	MRPL40	100	79.024	Cavia_porcellus
ENSRNOG00000049686	Mrpl40	97	77.000	ENSCCAG00000037694	MRPL40	100	77.000	Cebus_capucinus
ENSRNOG00000049686	Mrpl40	95	78.974	ENSCATG00000043592	-	96	78.974	Cercocebus_atys
ENSRNOG00000049686	Mrpl40	100	75.728	ENSCATG00000031418	-	100	75.728	Cercocebus_atys
ENSRNOG00000049686	Mrpl40	91	84.574	ENSCLAG00000016629	MRPL40	100	83.010	Chinchilla_lanigera
ENSRNOG00000049686	Mrpl40	100	76.214	ENSCSAG00000011593	MRPL40	100	76.214	Chlorocebus_sabaeus
ENSRNOG00000049686	Mrpl40	84	71.839	ENSCHOG00000008751	MRPL40	98	71.839	Choloepus_hoffmanni
ENSRNOG00000049686	Mrpl40	85	63.636	ENSCPBG00000010618	MRPL40	99	57.212	Chrysemys_picta_bellii
ENSRNOG00000049686	Mrpl40	62	36.434	ENSCSAVG00000001505	-	63	36.434	Ciona_savignyi
ENSRNOG00000049686	Mrpl40	90	81.720	ENSCANG00000038600	MRPL40	99	81.720	Colobus_angolensis_palliatus
ENSRNOG00000049686	Mrpl40	100	88.350	ENSCGRG00001019957	Mrpl40	100	88.350	Cricetulus_griseus_chok1gshd
ENSRNOG00000049686	Mrpl40	100	88.350	ENSCGRG00000001245	Mrpl40	100	88.350	Cricetulus_griseus_crigri
ENSRNOG00000049686	Mrpl40	98	49.756	ENSCSEG00000019750	mrpl40	100	48.792	Cynoglossus_semilaevis
ENSRNOG00000049686	Mrpl40	62	39.370	ENSCSEG00000012296	-	67	40.000	Cynoglossus_semilaevis
ENSRNOG00000049686	Mrpl40	77	62.658	ENSCVAG00000018229	mrpl40	77	62.658	Cyprinodon_variegatus
ENSRNOG00000049686	Mrpl40	85	56.571	ENSDARG00000043554	mrpl40	88	56.571	Danio_rerio
ENSRNOG00000049686	Mrpl40	100	67.476	ENSDNOG00000038360	-	100	67.476	Dasypus_novemcinctus
ENSRNOG00000049686	Mrpl40	100	79.126	ENSDORG00000002949	Mrpl40	100	79.126	Dipodomys_ordii
ENSRNOG00000049686	Mrpl40	71	40.132	FBgn0037892	mRpL40	78	40.132	Drosophila_melanogaster
ENSRNOG00000049686	Mrpl40	90	50.000	ENSETEG00000006816	-	99	50.000	Echinops_telfairi
ENSRNOG00000049686	Mrpl40	99	76.355	ENSEASG00005010493	MRPL40	99	76.355	Equus_asinus_asinus
ENSRNOG00000049686	Mrpl40	79	79.630	ENSECAG00000009876	MRPL40	97	79.630	Equus_caballus
ENSRNOG00000049686	Mrpl40	100	74.757	ENSEEUG00000009268	MRPL40	99	74.757	Erinaceus_europaeus
ENSRNOG00000049686	Mrpl40	98	51.196	ENSELUG00000009281	mrpl40	99	51.196	Esox_lucius
ENSRNOG00000049686	Mrpl40	100	78.155	ENSFCAG00000002752	MRPL40	100	78.155	Felis_catus
ENSRNOG00000049686	Mrpl40	90	52.432	ENSFALG00000007981	MRPL40	98	53.807	Ficedula_albicollis
ENSRNOG00000049686	Mrpl40	79	82.716	ENSFDAG00000020940	MRPL40	100	82.716	Fukomys_damarensis
ENSRNOG00000049686	Mrpl40	96	55.556	ENSGALG00000053063	MRPL40	59	55.556	Gallus_gallus
ENSRNOG00000049686	Mrpl40	77	61.392	ENSGAFG00000000522	mrpl40	77	61.392	Gambusia_affinis
ENSRNOG00000049686	Mrpl40	84	65.517	ENSGAGG00000020728	MRPL40	84	65.517	Gopherus_agassizii
ENSRNOG00000049686	Mrpl40	100	76.214	ENSGGOG00000012336	MRPL40	100	76.214	Gorilla_gorilla
ENSRNOG00000049686	Mrpl40	98	52.941	ENSHBUG00000000404	mrpl40	100	52.941	Haplochromis_burtoni
ENSRNOG00000049686	Mrpl40	79	84.568	ENSHGLG00000018525	MRPL40	100	84.568	Heterocephalus_glaber_female
ENSRNOG00000049686	Mrpl40	100	79.126	ENSHGLG00100009563	MRPL40	100	79.126	Heterocephalus_glaber_male
ENSRNOG00000049686	Mrpl40	98	49.261	ENSHCOG00000005731	mrpl40	100	49.261	Hippocampus_comes
ENSRNOG00000049686	Mrpl40	86	55.367	ENSIPUG00000020288	Mrpl40	83	55.367	Ictalurus_punctatus
ENSRNOG00000049686	Mrpl40	100	81.553	ENSSTOG00000002887	MRPL40	100	81.553	Ictidomys_tridecemlineatus
ENSRNOG00000049686	Mrpl40	100	83.495	ENSJJAG00000017905	Mrpl40	100	83.495	Jaculus_jaculus
ENSRNOG00000049686	Mrpl40	84	59.777	ENSKMAG00000003717	mrpl40	88	59.777	Kryptolebias_marmoratus
ENSRNOG00000049686	Mrpl40	87	54.444	ENSLBEG00000025203	mrpl40	96	53.846	Labrus_bergylta
ENSRNOG00000049686	Mrpl40	88	57.838	ENSLACG00000015070	MRPL40	97	56.566	Latimeria_chalumnae
ENSRNOG00000049686	Mrpl40	85	61.017	ENSLOCG00000001879	mrpl40	87	61.017	Lepisosteus_oculatus
ENSRNOG00000049686	Mrpl40	100	80.583	ENSLAFG00000011061	MRPL40	100	80.583	Loxodonta_africana
ENSRNOG00000049686	Mrpl40	84	79.769	ENSMFAG00000039890	-	92	79.769	Macaca_fascicularis
ENSRNOG00000049686	Mrpl40	100	75.728	ENSMFAG00000032018	-	100	75.728	Macaca_fascicularis
ENSRNOG00000049686	Mrpl40	97	76.884	ENSMFAG00000001495	-	98	76.884	Macaca_fascicularis
ENSRNOG00000049686	Mrpl40	84	79.191	ENSMMUG00000006218	-	96	79.191	Macaca_mulatta
ENSRNOG00000049686	Mrpl40	95	76.410	ENSMMUG00000030886	-	95	76.410	Macaca_mulatta
ENSRNOG00000049686	Mrpl40	97	77.387	ENSMNEG00000041171	-	98	77.387	Macaca_nemestrina
ENSRNOG00000049686	Mrpl40	100	74.272	ENSMNEG00000034050	-	100	74.272	Macaca_nemestrina
ENSRNOG00000049686	Mrpl40	99	63.725	ENSMNEG00000040492	-	99	63.725	Macaca_nemestrina
ENSRNOG00000049686	Mrpl40	95	78.462	ENSMLEG00000032552	-	96	78.462	Mandrillus_leucophaeus
ENSRNOG00000049686	Mrpl40	90	81.183	ENSMLEG00000030926	-	99	81.183	Mandrillus_leucophaeus
ENSRNOG00000049686	Mrpl40	84	79.769	ENSMLEG00000009022	-	92	79.769	Mandrillus_leucophaeus
ENSRNOG00000049686	Mrpl40	98	52.913	ENSMAMG00000014249	mrpl40	100	52.913	Mastacembelus_armatus
ENSRNOG00000049686	Mrpl40	98	51.961	ENSMZEG00005009853	mrpl40	100	51.961	Maylandia_zebra
ENSRNOG00000049686	Mrpl40	76	60.897	ENSMGAG00000001177	MRPL40	100	60.897	Meleagris_gallopavo
ENSRNOG00000049686	Mrpl40	100	86.893	ENSMAUG00000015350	Mrpl40	100	86.893	Mesocricetus_auratus
ENSRNOG00000049686	Mrpl40	100	79.612	ENSMICG00000046066	MRPL40	100	79.612	Microcebus_murinus
ENSRNOG00000049686	Mrpl40	100	88.350	ENSMOCG00000016970	Mrpl40	100	88.350	Microtus_ochrogaster
ENSRNOG00000049686	Mrpl40	75	61.935	ENSMMOG00000012861	mrpl40	84	61.935	Mola_mola
ENSRNOG00000049686	Mrpl40	86	67.416	ENSMODG00000010070	MRPL40	98	67.416	Monodelphis_domestica
ENSRNOG00000049686	Mrpl40	98	49.268	ENSMALG00000020778	mrpl40	100	49.268	Monopterus_albus
ENSRNOG00000049686	Mrpl40	100	93.689	MGP_CAROLIEiJ_G0020557	Mrpl40	100	94.444	Mus_caroli
ENSRNOG00000049686	Mrpl40	100	93.204	ENSMUSG00000022706	Mrpl40	100	94.444	Mus_musculus
ENSRNOG00000049686	Mrpl40	100	94.660	MGP_PahariEiJ_G0016262	Mrpl40	100	94.660	Mus_pahari
ENSRNOG00000049686	Mrpl40	100	92.233	MGP_SPRETEiJ_G0021452	Mrpl40	100	93.210	Mus_spretus
ENSRNOG00000049686	Mrpl40	100	79.126	ENSMPUG00000003865	MRPL40	100	79.126	Mustela_putorius_furo
ENSRNOG00000049686	Mrpl40	100	77.184	ENSMLUG00000002456	-	100	77.184	Myotis_lucifugus
ENSRNOG00000049686	Mrpl40	100	77.184	ENSMLUG00000024620	-	100	77.184	Myotis_lucifugus
ENSRNOG00000049686	Mrpl40	91	85.638	ENSNGAG00000000304	Mrpl40	93	85.638	Nannospalax_galili
ENSRNOG00000049686	Mrpl40	100	74.757	ENSNLEG00000005372	MRPL40	100	74.757	Nomascus_leucogenys
ENSRNOG00000049686	Mrpl40	71	52.381	ENSMEUG00000003868	-	91	52.381	Notamacropus_eugenii
ENSRNOG00000049686	Mrpl40	100	53.883	ENSOPRG00000002606	MRPL40	100	53.883	Ochotona_princeps
ENSRNOG00000049686	Mrpl40	100	82.039	ENSODEG00000017051	MRPL40	100	82.039	Octodon_degus
ENSRNOG00000049686	Mrpl40	98	51.471	ENSONIG00000014393	mrpl40	100	51.471	Oreochromis_niloticus
ENSRNOG00000049686	Mrpl40	90	80.108	ENSOCUG00000009859	MRPL40	67	80.108	Oryctolagus_cuniculus
ENSRNOG00000049686	Mrpl40	92	56.842	ENSORLG00000002574	mrpl40	98	56.842	Oryzias_latipes
ENSRNOG00000049686	Mrpl40	77	63.924	ENSORLG00020005727	mrpl40	77	63.924	Oryzias_latipes_hni
ENSRNOG00000049686	Mrpl40	77	62.658	ENSORLG00015015422	mrpl40	77	62.658	Oryzias_latipes_hsok
ENSRNOG00000049686	Mrpl40	84	59.091	ENSOMEG00000017632	mrpl40	86	59.091	Oryzias_melastigma
ENSRNOG00000049686	Mrpl40	90	82.258	ENSOGAG00000030071	MRPL40	99	82.258	Otolemur_garnettii
ENSRNOG00000049686	Mrpl40	96	67.839	ENSOARG00000017561	MRPL40	96	67.839	Ovis_aries
ENSRNOG00000049686	Mrpl40	100	76.699	ENSPPAG00000030349	MRPL40	100	76.699	Pan_paniscus
ENSRNOG00000049686	Mrpl40	92	80.526	ENSPPRG00000004672	MRPL40	100	78.641	Panthera_pardus
ENSRNOG00000049686	Mrpl40	90	81.183	ENSPTIG00000003393	MRPL40	90	81.183	Panthera_tigris_altaica
ENSRNOG00000049686	Mrpl40	100	76.699	ENSPTRG00000014061	MRPL40	100	76.699	Pan_troglodytes
ENSRNOG00000049686	Mrpl40	95	79.487	ENSPANG00000000595	-	96	79.487	Papio_anubis
ENSRNOG00000049686	Mrpl40	100	74.757	ENSPANG00000007370	-	100	74.757	Papio_anubis
ENSRNOG00000049686	Mrpl40	86	56.497	ENSPKIG00000024494	mrpl40	87	56.497	Paramormyrops_kingsleyae
ENSRNOG00000049686	Mrpl40	81	62.048	ENSPSIG00000003055	MRPL40	100	62.048	Pelodiscus_sinensis
ENSRNOG00000049686	Mrpl40	87	52.514	ENSPMGG00000018388	mrpl40	95	52.514	Periophthalmus_magnuspinnatus
ENSRNOG00000049686	Mrpl40	100	87.864	ENSPEMG00000017933	Mrpl40	100	87.864	Peromyscus_maniculatus_bairdii
ENSRNOG00000049686	Mrpl40	100	59.135	ENSPCIG00000025479	MRPL40	100	59.135	Phascolarctos_cinereus
ENSRNOG00000049686	Mrpl40	77	60.870	ENSPFOG00000012506	mrpl40	75	60.870	Poecilia_formosa
ENSRNOG00000049686	Mrpl40	77	62.025	ENSPLAG00000017335	mrpl40	77	62.025	Poecilia_latipinna
ENSRNOG00000049686	Mrpl40	77	62.658	ENSPMEG00000003881	mrpl40	77	62.658	Poecilia_mexicana
ENSRNOG00000049686	Mrpl40	77	63.291	ENSPREG00000011448	mrpl40	77	63.291	Poecilia_reticulata
ENSRNOG00000049686	Mrpl40	90	81.720	ENSPPYG00000011578	MRPL40	99	81.720	Pongo_abelii
ENSRNOG00000049686	Mrpl40	100	65.049	ENSPCAG00000007834	MRPL40	100	65.049	Procavia_capensis
ENSRNOG00000049686	Mrpl40	100	80.583	ENSPCOG00000014413	MRPL40	100	80.583	Propithecus_coquereli
ENSRNOG00000049686	Mrpl40	52	73.148	ENSPVAG00000006414	-	52	73.148	Pteropus_vampyrus
ENSRNOG00000049686	Mrpl40	98	51.961	ENSPNYG00000008216	mrpl40	100	51.961	Pundamilia_nyererei
ENSRNOG00000049686	Mrpl40	96	53.266	ENSPNAG00000000310	mrpl40	99	58.710	Pygocentrus_nattereri
ENSRNOG00000049686	Mrpl40	100	76.214	ENSRBIG00000023060	MRPL40	100	76.214	Rhinopithecus_bieti
ENSRNOG00000049686	Mrpl40	100	75.243	ENSRROG00000043837	MRPL40	100	75.243	Rhinopithecus_roxellana
ENSRNOG00000049686	Mrpl40	100	75.728	ENSSBOG00000031050	MRPL40	100	75.728	Saimiri_boliviensis_boliviensis
ENSRNOG00000049686	Mrpl40	77	67.925	ENSSHAG00000010239	MRPL40	99	67.925	Sarcophilus_harrisii
ENSRNOG00000049686	Mrpl40	93	58.639	ENSSFOG00015014220	mrpl40	97	58.639	Scleropages_formosus
ENSRNOG00000049686	Mrpl40	98	46.890	ENSSMAG00000006340	mrpl40	100	46.890	Scophthalmus_maximus
ENSRNOG00000049686	Mrpl40	98	52.195	ENSSDUG00000022994	mrpl40	100	52.195	Seriola_dumerili
ENSRNOG00000049686	Mrpl40	97	52.970	ENSSLDG00000009671	mrpl40	99	52.970	Seriola_lalandi_dorsalis
ENSRNOG00000049686	Mrpl40	100	79.126	ENSSARG00000003051	MRPL40	100	79.126	Sorex_araneus
ENSRNOG00000049686	Mrpl40	87	58.333	ENSSPUG00000015559	MRPL40	90	58.333	Sphenodon_punctatus
ENSRNOG00000049686	Mrpl40	98	52.195	ENSSPAG00000015481	mrpl40	100	52.195	Stegastes_partitus
ENSRNOG00000049686	Mrpl40	100	72.816	ENSSSCG00000034014	MRPL40	100	72.816	Sus_scrofa
ENSRNOG00000049686	Mrpl40	60	58.871	ENSTGUG00000008534	MRPL40	98	58.940	Taeniopygia_guttata
ENSRNOG00000049686	Mrpl40	76	64.968	ENSTRUG00000025904	mrpl40	78	64.968	Takifugu_rubripes
ENSRNOG00000049686	Mrpl40	90	75.806	ENSTTRG00000014932	MRPL40	100	72.816	Tursiops_truncatus
ENSRNOG00000049686	Mrpl40	100	77.670	ENSUAMG00000007667	MRPL40	100	77.670	Ursus_americanus
ENSRNOG00000049686	Mrpl40	92	76.720	ENSUMAG00000006804	MRPL40	99	76.720	Ursus_maritimus
ENSRNOG00000049686	Mrpl40	98	60.891	ENSVVUG00000020719	-	94	60.891	Vulpes_vulpes
ENSRNOG00000049686	Mrpl40	100	74.272	ENSVVUG00000025360	-	100	74.272	Vulpes_vulpes
ENSRNOG00000049686	Mrpl40	84	57.471	ENSXETG00000018600	mrpl40	87	57.471	Xenopus_tropicalis
ENSRNOG00000049686	Mrpl40	77	60.759	ENSXCOG00000002135	mrpl40	77	60.759	Xiphophorus_couchianus
ENSRNOG00000049686	Mrpl40	77	60.759	ENSXMAG00000014595	mrpl40	77	60.759	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005761	mitochondrial ribosome	9857009.	IDA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISS	Component
GO:0008150	biological_process	-	ND	Process