EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000049802 (Gene tree)
Gene ID: -
Gene Symbol: AABR07031533.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 76024 bases
Position: chr18:18003537-18079560
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000067024	RRM_1	PF00076.22	7.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072093	AABR07031533.1-201	489	-	ENSRNOP00000067024	163 (aa)	-	M0RBS7

Gene Model

Click here to download ENSRNOG00000049802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000049802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000049802	AABR07031533.1	71	78.495	ENSRNOG00000052224	Celf6	59	78.495
ENSRNOG00000049802	AABR07031533.1	56	36.559	ENSRNOG00000005387	Rbm3	71	33.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000049802	AABR07031533.1	57	78.495	ENSG00000140488	CELF6	59	88.462	Homo_sapiens
ENSRNOG00000049802	AABR07031533.1	75	76.423	ENSATEG00000002283	si:dkey-205h23.2	65	76.423	Anabas_testudineus
ENSRNOG00000049802	AABR07031533.1	59	86.458	ENSAPLG00000001120	-	100	86.458	Anas_platyrhynchos
ENSRNOG00000049802	AABR07031533.1	59	86.458	ENSACAG00000010826	-	100	86.458	Anolis_carolinensis
ENSRNOG00000049802	AABR07031533.1	56	80.220	ENSCAFG00020006479	-	54	80.220	Canis_lupus_dingo
ENSRNOG00000049802	AABR07031533.1	82	98.507	ENSCSAG00000017935	-	93	98.507	Chlorocebus_sabaeus
ENSRNOG00000049802	AABR07031533.1	66	79.630	ENSCPBG00000015256	-	66	79.630	Chrysemys_picta_bellii
ENSRNOG00000049802	AABR07031533.1	73	85.950	ENSDNOG00000043454	-	81	85.950	Dasypus_novemcinctus
ENSRNOG00000049802	AABR07031533.1	59	82.292	ENSEBUG00000011155	-	57	82.292	Eptatretus_burgeri
ENSRNOG00000049802	AABR07031533.1	67	83.636	ENSEBUG00000013374	-	91	83.636	Eptatretus_burgeri
ENSRNOG00000049802	AABR07031533.1	56	80.220	ENSECAG00000035617	-	54	80.220	Equus_caballus
ENSRNOG00000049802	AABR07031533.1	77	91.200	ENSFALG00000009186	-	98	91.200	Ficedula_albicollis
ENSRNOG00000049802	AABR07031533.1	58	98.947	ENSGALG00000038930	-	54	98.947	Gallus_gallus
ENSRNOG00000049802	AABR07031533.1	72	70.339	ENSGAGG00000016824	-	61	67.368	Gopherus_agassizii
ENSRNOG00000049802	AABR07031533.1	75	75.410	ENSLACG00000016312	-	98	75.410	Latimeria_chalumnae
ENSRNOG00000049802	AABR07031533.1	57	74.737	ENSLACG00000002119	-	93	74.468	Latimeria_chalumnae
ENSRNOG00000049802	AABR07031533.1	57	82.796	ENSLOCG00000017522	-	99	82.796	Lepisosteus_oculatus
ENSRNOG00000049802	AABR07031533.1	75	67.480	MGP_CAROLIEiJ_G0032305	Celf6	73	67.480	Mus_caroli
ENSRNOG00000049802	AABR07031533.1	75	67.480	ENSMUSG00000032297	Celf6	73	67.480	Mus_musculus
ENSRNOG00000049802	AABR07031533.1	75	67.480	MGP_PahariEiJ_G0015171	Celf6	73	67.480	Mus_pahari
ENSRNOG00000049802	AABR07031533.1	75	67.480	MGP_SPRETEiJ_G0033445	Celf6	73	67.480	Mus_spretus
ENSRNOG00000049802	AABR07031533.1	61	74.747	ENSONIG00000004856	celf5a	74	74.747	Oreochromis_niloticus
ENSRNOG00000049802	AABR07031533.1	56	80.220	ENSPTIG00000005511	-	58	80.220	Panthera_tigris_altaica
ENSRNOG00000049802	AABR07031533.1	69	78.070	ENSPKIG00000004198	si:dkey-205h23.2	67	62.500	Paramormyrops_kingsleyae
ENSRNOG00000049802	AABR07031533.1	77	84.000	ENSPSIG00000015573	-	100	84.000	Pelodiscus_sinensis
ENSRNOG00000049802	AABR07031533.1	75	47.581	ENSPMGG00000021875	si:dkey-205h23.2	64	47.581	Periophthalmus_magnuspinnatus
ENSRNOG00000049802	AABR07031533.1	57	77.895	ENSPFOG00000024694	-	96	77.895	Poecilia_formosa
ENSRNOG00000049802	AABR07031533.1	61	88.889	ENSSHAG00000001767	-	73	88.889	Sarcophilus_harrisii
ENSRNOG00000049802	AABR07031533.1	58	86.598	ENSSHAG00000008992	-	100	86.598	Sarcophilus_harrisii
ENSRNOG00000049802	AABR07031533.1	66	82.407	ENSSPAG00000007933	-	79	82.407	Stegastes_partitus
ENSRNOG00000049802	AABR07031533.1	77	91.200	ENSTGUG00000001647	-	100	91.200	Taeniopygia_guttata
ENSRNOG00000049802	AABR07031533.1	56	80.220	ENSUAMG00000025727	-	54	80.220	Ursus_americanus
ENSRNOG00000049802	AABR07031533.1	57	79.570	ENSVVUG00000018268	-	64	79.570	Vulpes_vulpes