EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000050108 (Gene tree)
Gene ID: 100911319
Gene Symbol: LOC100911319
Alias: -
Full Name: zinc finger protein 36%2C C3H1 type-like 2-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 1943 bases
Position: chr7:2351933-2353875
Accession: 6493373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066942	zf-CCCH	PF00642.24	2e-21	1	2
ENSRNOP00000066942	zf-CCCH	PF00642.24	2e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074873	-	1449	XM_003750261	ENSRNOP00000066942	482 (aa)	XP_003750309	M0RBK3

Gene Model

Click here to download ENSRNOG00000050108's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000050108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000050108	LOC100911319	73	69.841	ENSRNOG00000058646	Zfp36l1	80	65.079
ENSRNOG00000050108	LOC100911319	100	99.793	ENSRNOG00000005067	Zfp36l2	100	99.793

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000050108	LOC100911319	100	90.283	ENSG00000152518	ZFP36L2	100	89.879	Homo_sapiens
ENSRNOG00000050108	LOC100911319	100	50.996	ENSAPOG00000004647	zfp36l2	97	47.525	Acanthochromis_polyacanthus
ENSRNOG00000050108	LOC100911319	100	71.546	ENSAMEG00000005597	ZFP36L2	83	71.959	Ailuropoda_melanoleuca
ENSRNOG00000050108	LOC100911319	100	50.593	ENSACIG00000014285	zfp36l2	100	47.211	Amphilophus_citrinellus
ENSRNOG00000050108	LOC100911319	100	51.297	ENSAOCG00000011193	zfp36l2	97	47.817	Amphiprion_ocellaris
ENSRNOG00000050108	LOC100911319	100	51.098	ENSAPEG00000006879	zfp36l2	97	47.619	Amphiprion_percula
ENSRNOG00000050108	LOC100911319	100	50.480	ENSATEG00000009119	zfp36l2	97	46.809	Anabas_testudineus
ENSRNOG00000050108	LOC100911319	82	67.133	ENSACAG00000014740	ZFP36L2	100	58.077	Anolis_carolinensis
ENSRNOG00000050108	LOC100911319	100	89.452	ENSANAG00000025228	ZFP36L2	100	90.872	Aotus_nancymaae
ENSRNOG00000050108	LOC100911319	100	50.685	ENSACLG00000015842	zfp36l2	61	56.757	Astatotilapia_calliptera
ENSRNOG00000050108	LOC100911319	69	75.410	ENSAMXG00000040114	zfp36l2	79	75.410	Astyanax_mexicanus
ENSRNOG00000050108	LOC100911319	83	55.118	ENSAMXG00000043777	ZFP36L2	95	53.061	Astyanax_mexicanus
ENSRNOG00000050108	LOC100911319	100	83.333	ENSBTAG00000003553	ZFP36L2	100	84.350	Bos_taurus
ENSRNOG00000050108	LOC100911319	100	89.697	ENSCJAG00000014571	ZFP36L2	100	89.293	Callithrix_jacchus
ENSRNOG00000050108	LOC100911319	100	85.282	ENSCAFG00000031079	ZFP36L2	100	84.507	Canis_familiaris
ENSRNOG00000050108	LOC100911319	100	84.940	ENSCAFG00020025413	ZFP36L2	100	84.168	Canis_lupus_dingo
ENSRNOG00000050108	LOC100911319	100	89.897	ENSCHIG00000025020	ZFP36L2	100	90.928	Capra_hircus
ENSRNOG00000050108	LOC100911319	79	74.811	ENSCPOG00000022038	ZFP36L2	91	77.121	Cavia_porcellus
ENSRNOG00000050108	LOC100911319	100	89.452	ENSCCAG00000027388	ZFP36L2	100	90.872	Cebus_capucinus
ENSRNOG00000050108	LOC100911319	100	84.584	ENSCATG00000009833	ZFP36L2	100	89.452	Cercocebus_atys
ENSRNOG00000050108	LOC100911319	100	84.381	ENSCSAG00000012709	ZFP36L2	100	90.467	Chlorocebus_sabaeus
ENSRNOG00000050108	LOC100911319	100	58.071	ENSCPBG00000005249	ZFP36L2	100	63.750	Chrysemys_picta_bellii
ENSRNOG00000050108	LOC100911319	62	97.101	ENSCANG00000039077	ZFP36L2	99	96.970	Colobus_angolensis_palliatus
ENSRNOG00000050108	LOC100911319	100	95.893	ENSCGRG00001023281	Zfp36l2	100	95.893	Cricetulus_griseus_chok1gshd
ENSRNOG00000050108	LOC100911319	57	53.035	ENSCSEG00000000741	zfp36l2	97	45.124	Cynoglossus_semilaevis
ENSRNOG00000050108	LOC100911319	100	43.927	ENSDARG00000021806	zfp36l2	81	81.356	Danio_rerio
ENSRNOG00000050108	LOC100911319	57	98.485	ENSDNOG00000043725	ZFP36L2	77	86.486	Dasypus_novemcinctus
ENSRNOG00000050108	LOC100911319	59	98.611	ENSDORG00000027040	Zfp36l2	98	98.485	Dipodomys_ordii
ENSRNOG00000050108	LOC100911319	76	38.522	ENSEBUG00000004152	zfp36l2	74	41.290	Eptatretus_burgeri
ENSRNOG00000050108	LOC100911319	100	89.178	ENSEASG00005005027	ZFP36L2	70	89.980	Equus_asinus_asinus
ENSRNOG00000050108	LOC100911319	97	88.090	ENSECAG00000017795	ZFP36L2	95	87.680	Equus_caballus
ENSRNOG00000050108	LOC100911319	100	50.905	ENSELUG00000000600	zfp36l2	61	58.131	Esox_lucius
ENSRNOG00000050108	LOC100911319	100	87.425	ENSFCAG00000043567	ZFP36L2	100	86.826	Felis_catus
ENSRNOG00000050108	LOC100911319	100	51.521	ENSFHEG00000020530	zfp36l2	97	48.171	Fundulus_heteroclitus
ENSRNOG00000050108	LOC100911319	100	54.856	ENSGALG00000033129	ZFP36L2	100	65.409	Gallus_gallus
ENSRNOG00000050108	LOC100911319	100	85.598	ENSGGOG00000001402	ZFP36L2	100	85.801	Gorilla_gorilla
ENSRNOG00000050108	LOC100911319	100	50.294	ENSHBUG00000007929	zfp36l2	61	56.566	Haplochromis_burtoni
ENSRNOG00000050108	LOC100911319	100	77.510	ENSHGLG00000005547	ZFP36L2	100	80.041	Heterocephalus_glaber_female
ENSRNOG00000050108	LOC100911319	100	45.122	ENSHCOG00000006757	zfp36l2	62	47.857	Hippocampus_comes
ENSRNOG00000050108	LOC100911319	61	66.216	ENSIPUG00000008010	zfp36l2	64	47.350	Ictalurus_punctatus
ENSRNOG00000050108	LOC100911319	100	91.224	ENSSTOG00000024603	ZFP36L2	100	90.816	Ictidomys_tridecemlineatus
ENSRNOG00000050108	LOC100911319	80	79.693	ENSJJAG00000024221	Zfp36l2	100	82.759	Jaculus_jaculus
ENSRNOG00000050108	LOC100911319	56	55.390	ENSKMAG00000011495	zfp36l2	86	59.091	Kryptolebias_marmoratus
ENSRNOG00000050108	LOC100911319	100	86.318	ENSLAFG00000004265	ZFP36L2	100	88.732	Loxodonta_africana
ENSRNOG00000050108	LOC100911319	100	84.381	ENSMFAG00000001243	ZFP36L2	100	90.264	Macaca_fascicularis
ENSRNOG00000050108	LOC100911319	100	83.976	ENSMMUG00000042653	ZFP36L2	100	90.061	Macaca_mulatta
ENSRNOG00000050108	LOC100911319	100	84.211	ENSMNEG00000034994	ZFP36L2	100	89.474	Macaca_nemestrina
ENSRNOG00000050108	LOC100911319	100	51.569	ENSMAMG00000010793	zfp36l2	61	58.983	Mastacembelus_armatus
ENSRNOG00000050108	LOC100911319	100	50.685	ENSMZEG00005018129	zfp36l2	61	56.757	Maylandia_zebra
ENSRNOG00000050108	LOC100911319	84	44.444	ENSMAUG00000002048	-	72	43.659	Mesocricetus_auratus
ENSRNOG00000050108	LOC100911319	100	77.618	ENSMICG00000004731	-	100	76.483	Microcebus_murinus
ENSRNOG00000050108	LOC100911319	100	88.866	ENSMICG00000034373	ZFP36L2	100	88.664	Microcebus_murinus
ENSRNOG00000050108	LOC100911319	100	96.701	ENSMOCG00000011066	Zfp36l2	100	96.701	Microtus_ochrogaster
ENSRNOG00000050108	LOC100911319	59	75.828	ENSMODG00000000407	ZFP36L2	98	66.667	Monodelphis_domestica
ENSRNOG00000050108	LOC100911319	55	48.905	ENSMALG00000005933	zfp36l2	60	49.004	Monopterus_albus
ENSRNOG00000050108	LOC100911319	100	90.593	MGP_CAROLIEiJ_G0021921	Zfp36l2	100	93.252	Mus_caroli
ENSRNOG00000050108	LOC100911319	100	89.366	ENSMUSG00000045817	Zfp36l2	100	92.638	Mus_musculus
ENSRNOG00000050108	LOC100911319	100	95.082	MGP_PahariEiJ_G0020911	Zfp36l2	100	95.082	Mus_pahari
ENSRNOG00000050108	LOC100911319	100	89.388	MGP_SPRETEiJ_G0022837	Zfp36l2	100	91.429	Mus_spretus
ENSRNOG00000050108	LOC100911319	99	86.922	ENSMPUG00000011587	ZFP36L2	99	87.123	Mustela_putorius_furo
ENSRNOG00000050108	LOC100911319	52	78.599	ENSMLUG00000015588	-	73	78.599	Myotis_lucifugus
ENSRNOG00000050108	LOC100911319	100	89.366	ENSNGAG00000001096	Zfp36l2	100	91.002	Nannospalax_galili
ENSRNOG00000050108	LOC100911319	100	51.272	ENSNBRG00000019818	zfp36l2	61	57.770	Neolamprologus_brichardi
ENSRNOG00000050108	LOC100911319	100	88.911	ENSNLEG00000016712	ZFP36L2	100	88.508	Nomascus_leucogenys
ENSRNOG00000050108	LOC100911319	54	79.197	ENSMEUG00000010649	ZFP36L2	100	69.000	Notamacropus_eugenii
ENSRNOG00000050108	LOC100911319	100	50.685	ENSONIG00000002997	zfp36l2	61	57.239	Oreochromis_niloticus
ENSRNOG00000050108	LOC100911319	56	59.567	ENSOANG00000002848	-	80	62.094	Ornithorhynchus_anatinus
ENSRNOG00000050108	LOC100911319	58	90.657	ENSOCUG00000029169	ZFP36L2	79	88.927	Oryctolagus_cuniculus
ENSRNOG00000050108	LOC100911319	100	87.677	ENSOGAG00000028804	ZFP36L2	84	87.475	Otolemur_garnettii
ENSRNOG00000050108	LOC100911319	69	98.413	ENSPPAG00000031644	-	74	96.970	Pan_paniscus
ENSRNOG00000050108	LOC100911319	100	86.028	ENSPPRG00000012511	ZFP36L2	100	86.228	Panthera_pardus
ENSRNOG00000050108	LOC100911319	100	90.835	ENSPTRG00000051255	ZFP36L2	100	90.428	Pan_troglodytes
ENSRNOG00000050108	LOC100911319	100	84.381	ENSPANG00000018603	ZFP36L2	100	90.467	Papio_anubis
ENSRNOG00000050108	LOC100911319	65	60.377	ENSPKIG00000009699	-	63	43.396	Paramormyrops_kingsleyae
ENSRNOG00000050108	LOC100911319	100	51.837	ENSPMGG00000018810	zfp36l2	60	58.657	Periophthalmus_magnuspinnatus
ENSRNOG00000050108	LOC100911319	100	89.278	ENSPEMG00000018068	Zfp36l2	100	89.278	Peromyscus_maniculatus_bairdii
ENSRNOG00000050108	LOC100911319	57	59.574	ENSPLAG00000015739	zfp36l2	97	47.239	Poecilia_latipinna
ENSRNOG00000050108	LOC100911319	57	59.075	ENSPMEG00000008897	zfp36l2	97	47.648	Poecilia_mexicana
ENSRNOG00000050108	LOC100911319	57	59.717	ENSPMEG00000013175	-	97	47.648	Poecilia_mexicana
ENSRNOG00000050108	LOC100911319	57	59.028	ENSPREG00000010467	zfp36l2	97	47.358	Poecilia_reticulata
ENSRNOG00000050108	LOC100911319	70	90.828	ENSPPYG00000012458	-	99	90.774	Pongo_abelii
ENSRNOG00000050108	LOC100911319	75	87.868	ENSPCAG00000010765	ZFP36L2	75	87.132	Procavia_capensis
ENSRNOG00000050108	LOC100911319	100	88.259	ENSPCOG00000015409	ZFP36L2	100	88.462	Propithecus_coquereli
ENSRNOG00000050108	LOC100911319	100	47.368	ENSPNAG00000013174	ZFP36L2	98	57.292	Pygocentrus_nattereri
ENSRNOG00000050108	LOC100911319	100	41.803	ENSPNAG00000009692	zfp36l2	80	77.049	Pygocentrus_nattereri
ENSRNOG00000050108	LOC100911319	100	83.200	ENSRBIG00000026428	ZFP36L2	100	88.400	Rhinopithecus_bieti
ENSRNOG00000050108	LOC100911319	100	83.333	ENSRROG00000042023	ZFP36L2	100	88.798	Rhinopithecus_roxellana
ENSRNOG00000050108	LOC100911319	66	94.410	ENSSBOG00000020271	ZFP36L2	93	94.410	Saimiri_boliviensis_boliviensis
ENSRNOG00000050108	LOC100911319	69	62.667	ENSSFOG00015008894	zfp36l2	80	73.770	Scleropages_formosus
ENSRNOG00000050108	LOC100911319	78	52.723	ENSSMAG00000015565	zfp36l2	99	51.621	Scophthalmus_maximus
ENSRNOG00000050108	LOC100911319	100	51.190	ENSSDUG00000000788	zfp36l2	97	47.222	Seriola_dumerili
ENSRNOG00000050108	LOC100911319	100	50.891	ENSSLDG00000001126	zfp36l2	97	46.733	Seriola_lalandi_dorsalis
ENSRNOG00000050108	LOC100911319	100	54.628	ENSSPUG00000009625	ZFP36L2	100	63.804	Sphenodon_punctatus
ENSRNOG00000050108	LOC100911319	100	51.394	ENSSPAG00000009096	zfp36l2	97	47.921	Stegastes_partitus
ENSRNOG00000050108	LOC100911319	100	90.467	ENSSSCG00000038549	ZFP36L2	100	90.669	Sus_scrofa
ENSRNOG00000050108	LOC100911319	100	50.000	ENSTRUG00000019626	zfp36l2	61	57.047	Takifugu_rubripes
ENSRNOG00000050108	LOC100911319	60	87.543	ENSTBEG00000012370	ZFP36L2	89	87.900	Tupaia_belangeri
ENSRNOG00000050108	LOC100911319	100	90.081	ENSTTRG00000006356	ZFP36L2	100	90.688	Tursiops_truncatus
ENSRNOG00000050108	LOC100911319	100	88.129	ENSUAMG00000024227	ZFP36L2	100	88.129	Ursus_americanus
ENSRNOG00000050108	LOC100911319	73	86.501	ENSVVUG00000000298	ZFP36L2	60	84.341	Vulpes_vulpes
ENSRNOG00000050108	LOC100911319	100	57.438	ENSXETG00000009274	zfp36l2	92	66.187	Xenopus_tropicalis
ENSRNOG00000050108	LOC100911319	82	59.524	ENSXCOG00000006597	zfp36l2	93	45.595	Xiphophorus_couchianus
ENSRNOG00000050108	LOC100911319	57	59.786	ENSXMAG00000024222	zfp36l2	97	47.639	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0061158	3'-UTR-mediated mRNA destabilization	21873635.	IBA	Process