EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000050295 (Gene tree)
Gene ID: 497195
Gene Symbol: Rnase17
Alias: R17
Full Name: ribonuclease 17
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 468 bases
Position: chr15:28204224-28204691
Accession: 1359245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000050225	RnaseA	PF00074.20	6.2e-36	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000048941	-	468	XM_008770561	ENSRNOP00000050225	155 (aa)	XP_008768783	Q5GAM2

Gene Model

Click here to download ENSRNOG00000050295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000050295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000050295	Rnase17	69	33.645	ENSRNOG00000025625	Rnase4	65	33.645
ENSRNOG00000050295	Rnase17	80	35.659	ENSRNOG00000054433	Rnase1l2	78	35.659
ENSRNOG00000050295	Rnase17	88	44.928	ENSRNOG00000025597	Rnase6	78	48.000
ENSRNOG00000050295	Rnase17	77	32.258	ENSRNOG00000053633	LOC103690354	63	34.906
ENSRNOG00000050295	Rnase17	100	73.548	ENSRNOG00000032133	Rnase2	100	73.548
ENSRNOG00000050295	Rnase17	80	35.659	ENSRNOG00000057064	LOC103694853	78	35.659
ENSRNOG00000050295	Rnase17	100	96.129	ENSRNOG00000053457	Rnase3	100	96.129
ENSRNOG00000050295	Rnase17	100	96.129	ENSRNOG00000031445	LOC100361866	100	96.129
ENSRNOG00000050295	Rnase17	86	73.684	ENSRNOG00000025515	Ear1	88	73.684
ENSRNOG00000050295	Rnase17	88	44.928	ENSRNOG00000055367	LOC103694852	78	48.000
ENSRNOG00000050295	Rnase17	91	31.293	ENSRNOG00000057266	Rnase1	63	34.906
ENSRNOG00000050295	Rnase17	95	36.538	ENSRNOG00000025615	Rnase1l1	78	34.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000050295	Rnase17	100	50.617	ENSG00000169385	RNASE2	83	51.111	Homo_sapiens
ENSRNOG00000050295	Rnase17	98	51.899	ENSG00000169397	RNASE3	78	53.175	Homo_sapiens
ENSRNOG00000050295	Rnase17	100	51.250	ENSANAG00000014479	-	84	52.239	Aotus_nancymaae
ENSRNOG00000050295	Rnase17	82	57.480	ENSBTAG00000049914	-	68	57.480	Bos_taurus
ENSRNOG00000050295	Rnase17	82	59.055	ENSBTAG00000025664	-	68	59.055	Bos_taurus
ENSRNOG00000050295	Rnase17	81	53.968	ENSCJAG00000009638	-	78	53.968	Callithrix_jacchus
ENSRNOG00000050295	Rnase17	82	55.118	ENSCHIG00000006998	-	80	55.118	Capra_hircus
ENSRNOG00000050295	Rnase17	81	52.381	ENSCCAG00000008336	-	78	52.381	Cebus_capucinus
ENSRNOG00000050295	Rnase17	100	49.068	ENSCATG00000021993	RNASE3	80	49.612	Cercocebus_atys
ENSRNOG00000050295	Rnase17	82	51.163	ENSCSAG00000000344	RNASE2	80	51.163	Chlorocebus_sabaeus
ENSRNOG00000050295	Rnase17	81	47.656	ENSCANG00000041784	RNASE2	79	47.656	Colobus_angolensis_palliatus
ENSRNOG00000050295	Rnase17	100	58.861	ENSCGRG00001015041	Ear10	100	58.861	Cricetulus_griseus_chok1gshd
ENSRNOG00000050295	Rnase17	100	63.291	ENSCGRG00001015384	Ear7	100	63.291	Cricetulus_griseus_chok1gshd
ENSRNOG00000050295	Rnase17	100	61.392	ENSCGRG00001015465	Ear11	100	61.392	Cricetulus_griseus_chok1gshd
ENSRNOG00000050295	Rnase17	100	63.291	ENSCGRG00000006180	Ear7	100	63.291	Cricetulus_griseus_crigri
ENSRNOG00000050295	Rnase17	100	59.494	ENSCGRG00000013443	Ear10	100	59.494	Cricetulus_griseus_crigri
ENSRNOG00000050295	Rnase17	100	61.392	ENSCGRG00000003290	Ear11	100	61.392	Cricetulus_griseus_crigri
ENSRNOG00000050295	Rnase17	96	53.595	ENSDNOG00000043774	-	83	53.788	Dasypus_novemcinctus
ENSRNOG00000050295	Rnase17	84	53.030	ENSDNOG00000033465	-	83	53.030	Dasypus_novemcinctus
ENSRNOG00000050295	Rnase17	82	48.819	ENSDORG00000028426	-	79	48.819	Dipodomys_ordii
ENSRNOG00000050295	Rnase17	81	50.000	ENSEASG00005010211	-	71	50.000	Equus_asinus_asinus
ENSRNOG00000050295	Rnase17	81	50.794	ENSECAG00000002332	-	79	50.794	Equus_caballus
ENSRNOG00000050295	Rnase17	98	51.899	ENSGGOG00000037139	RNASE3	78	53.175	Gorilla_gorilla
ENSRNOG00000050295	Rnase17	100	51.235	ENSGGOG00000043975	RNASE2	83	51.852	Gorilla_gorilla
ENSRNOG00000050295	Rnase17	90	48.252	ENSSTOG00000030965	-	73	50.394	Ictidomys_tridecemlineatus
ENSRNOG00000050295	Rnase17	98	50.000	ENSSTOG00000024645	-	80	49.606	Ictidomys_tridecemlineatus
ENSRNOG00000050295	Rnase17	90	48.252	ENSSTOG00000020133	-	80	51.969	Ictidomys_tridecemlineatus
ENSRNOG00000050295	Rnase17	100	49.068	ENSMFAG00000014110	-	80	49.612	Macaca_fascicularis
ENSRNOG00000050295	Rnase17	100	52.174	ENSMFAG00000014172	-	80	53.488	Macaca_fascicularis
ENSRNOG00000050295	Rnase17	100	52.795	ENSMMUG00000037666	-	80	54.264	Macaca_mulatta
ENSRNOG00000050295	Rnase17	100	48.447	ENSMMUG00000040314	-	80	48.837	Macaca_mulatta
ENSRNOG00000050295	Rnase17	82	51.938	ENSMMUG00000046252	RNASE2	80	51.938	Macaca_mulatta
ENSRNOG00000050295	Rnase17	100	52.174	ENSMNEG00000001455	-	80	53.488	Macaca_nemestrina
ENSRNOG00000050295	Rnase17	100	49.068	ENSMNEG00000038266	-	80	49.612	Macaca_nemestrina
ENSRNOG00000050295	Rnase17	100	47.205	ENSMLEG00000002481	RNASE3	80	47.287	Mandrillus_leucophaeus
ENSRNOG00000050295	Rnase17	100	61.392	ENSMAUG00000016887	-	80	60.630	Mesocricetus_auratus
ENSRNOG00000050295	Rnase17	86	63.433	ENSMUSG00000072596	Ear2	86	63.433	Mus_musculus
ENSRNOG00000050295	Rnase17	100	65.161	ENSMUSG00000050766	Ear14	100	65.161	Mus_musculus
ENSRNOG00000050295	Rnase17	100	65.161	ENSMUSG00000059606	Rnase2b	100	65.161	Mus_musculus
ENSRNOG00000050295	Rnase17	86	62.406	ENSMUSG00000072601	Ear1	86	62.406	Mus_musculus
ENSRNOG00000050295	Rnase17	100	67.308	ENSMUSG00000090166	Ear10	100	67.308	Mus_musculus
ENSRNOG00000050295	Rnase17	86	58.647	ENSMUSG00000062148	Ear6	100	62.581	Mus_musculus
ENSRNOG00000050295	Rnase17	100	72.258	ENSMUSG00000047222	Rnase2a	100	72.258	Mus_musculus
ENSRNOG00000050295	Rnase17	61	62.105	MGP_PahariEiJ_G0030246	-	90	62.105	Mus_pahari
ENSRNOG00000050295	Rnase17	81	44.615	ENSMLUG00000030121	-	78	44.615	Myotis_lucifugus
ENSRNOG00000050295	Rnase17	68	50.000	ENSMLUG00000023348	-	76	50.000	Myotis_lucifugus
ENSRNOG00000050295	Rnase17	81	45.736	ENSOCUG00000015951	-	81	45.736	Oryctolagus_cuniculus
ENSRNOG00000050295	Rnase17	80	50.806	ENSOCUG00000007497	-	79	50.806	Oryctolagus_cuniculus
ENSRNOG00000050295	Rnase17	88	51.408	ENSOGAG00000027626	-	80	53.906	Otolemur_garnettii
ENSRNOG00000050295	Rnase17	99	50.943	ENSOGAG00000032016	-	80	50.781	Otolemur_garnettii
ENSRNOG00000050295	Rnase17	99	53.750	ENSOGAG00000013322	-	83	54.135	Otolemur_garnettii
ENSRNOG00000050295	Rnase17	90	53.521	ENSOARG00000019719	-	80	55.906	Ovis_aries
ENSRNOG00000050295	Rnase17	100	50.617	ENSPPAG00000033117	RNASE2	83	51.111	Pan_paniscus
ENSRNOG00000050295	Rnase17	100	50.617	ENSPTRG00000006106	RNASE2	83	51.111	Pan_troglodytes
ENSRNOG00000050295	Rnase17	100	51.235	ENSPANG00000005471	-	80	54.264	Papio_anubis
ENSRNOG00000050295	Rnase17	100	67.722	ENSPEMG00000023630	-	100	67.722	Peromyscus_maniculatus_bairdii
ENSRNOG00000050295	Rnase17	82	54.264	ENSPPYG00000005579	-	80	54.264	Pongo_abelii
ENSRNOG00000050295	Rnase17	100	53.704	ENSPPYG00000005580	RNASE2	83	54.815	Pongo_abelii
ENSRNOG00000050295	Rnase17	100	49.068	ENSRBIG00000010077	RNASE3	80	49.612	Rhinopithecus_bieti
ENSRNOG00000050295	Rnase17	81	56.349	ENSSBOG00000007632	-	78	56.349	Saimiri_boliviensis_boliviensis
ENSRNOG00000050295	Rnase17	82	51.181	ENSSSCG00000035377	-	81	51.181	Sus_scrofa

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004540	ribonuclease activity	21873635.	IBA	Function
GO:0090501	RNA phosphodiester bond hydrolysis	-	IEA	Process