EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000050381 (Gene tree)
Gene ID: 301122
Gene Symbol: Dus3l
Alias: MGC124806
Full Name: dihydrouridine synthase 3-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4535 bases
Position: chr9:10289446-10293980
Accession: 1563228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000066698	zf-CCCH	PF00642.24	3.3e-05	1	1
ENSRNOP00000066698	Dus	PF01207.17	3.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000072703	-	2001	XM_006244314	ENSRNOP00000066698	640 (aa)	XP_006244376	M0RAY0

Gene Model

Click here to download ENSRNOG00000050381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000050381's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000050381	Dus3l	100	81.692	ENSG00000141994	DUS3L	100	83.960	Homo_sapiens
ENSRNOG00000050381	Dus3l	96	60.726	ENSAPOG00000016764	dus3l	97	60.726	Acanthochromis_polyacanthus
ENSRNOG00000050381	Dus3l	98	79.907	ENSAMEG00000012423	-	99	79.661	Ailuropoda_melanoleuca
ENSRNOG00000050381	Dus3l	99	60.154	ENSAOCG00000004343	dus3l	97	61.076	Amphiprion_ocellaris
ENSRNOG00000050381	Dus3l	99	59.846	ENSAPEG00000005828	dus3l	97	60.759	Amphiprion_percula
ENSRNOG00000050381	Dus3l	99	60.245	ENSATEG00000011064	dus3l	98	61.006	Anabas_testudineus
ENSRNOG00000050381	Dus3l	95	65.858	ENSAPLG00000004636	-	100	66.181	Anas_platyrhynchos
ENSRNOG00000050381	Dus3l	80	49.038	ENSACAG00000012955	-	85	49.038	Anolis_carolinensis
ENSRNOG00000050381	Dus3l	100	79.666	ENSANAG00000021997	DUS3L	100	91.036	Aotus_nancymaae
ENSRNOG00000050381	Dus3l	99	59.685	ENSACLG00000011576	dus3l	97	60.616	Astatotilapia_calliptera
ENSRNOG00000050381	Dus3l	98	49.219	ENSAMXG00000043269	dus3l	97	50.079	Astyanax_mexicanus
ENSRNOG00000050381	Dus3l	100	79.511	ENSBTAG00000011842	DUS3L	100	79.511	Bos_taurus
ENSRNOG00000050381	Dus3l	87	48.348	WBGene00021377	Y37E11B.5	96	48.348	Caenorhabditis_elegans
ENSRNOG00000050381	Dus3l	100	79.635	ENSCJAG00000016997	DUS3L	100	91.317	Callithrix_jacchus
ENSRNOG00000050381	Dus3l	97	80.411	ENSCAFG00000018762	DUS3L	100	79.878	Canis_familiaris
ENSRNOG00000050381	Dus3l	97	80.411	ENSCAFG00020018976	-	100	79.878	Canis_lupus_dingo
ENSRNOG00000050381	Dus3l	100	79.817	ENSCHIG00000021327	-	100	79.817	Capra_hircus
ENSRNOG00000050381	Dus3l	94	74.587	ENSCAPG00000012525	DUS3L	100	74.587	Cavia_aperea
ENSRNOG00000050381	Dus3l	100	76.816	ENSCPOG00000021236	DUS3L	100	76.816	Cavia_porcellus
ENSRNOG00000050381	Dus3l	98	79.479	ENSCCAG00000036889	DUS3L	99	91.597	Cebus_capucinus
ENSRNOG00000050381	Dus3l	100	81.957	ENSCATG00000040809	DUS3L	100	84.712	Cercocebus_atys
ENSRNOG00000050381	Dus3l	100	79.507	ENSCLAG00000008470	DUS3L	100	79.661	Chinchilla_lanigera
ENSRNOG00000050381	Dus3l	100	81.957	ENSCSAG00000009883	DUS3L	100	81.957	Chlorocebus_sabaeus
ENSRNOG00000050381	Dus3l	98	61.834	ENSCPBG00000011136	-	98	61.852	Chrysemys_picta_bellii
ENSRNOG00000050381	Dus3l	98	52.381	ENSCING00000004940	zf(c3h)-5	98	52.894	Ciona_intestinalis
ENSRNOG00000050381	Dus3l	86	56.159	ENSCSAVG00000000525	-	100	56.159	Ciona_savignyi
ENSRNOG00000050381	Dus3l	100	81.957	ENSCANG00000036677	DUS3L	100	84.962	Colobus_angolensis_palliatus
ENSRNOG00000050381	Dus3l	97	90.895	ENSCGRG00001023361	Dus3l	100	90.417	Cricetulus_griseus_chok1gshd
ENSRNOG00000050381	Dus3l	97	90.895	ENSCGRG00000005214	Dus3l	100	90.417	Cricetulus_griseus_crigri
ENSRNOG00000050381	Dus3l	96	60.127	ENSCSEG00000014994	dus3l	99	59.259	Cynoglossus_semilaevis
ENSRNOG00000050381	Dus3l	94	55.665	ENSCVAG00000007874	dus3l	97	56.000	Cyprinodon_variegatus
ENSRNOG00000050381	Dus3l	98	60.448	ENSDARG00000099528	dus3l	100	80.357	Danio_rerio
ENSRNOG00000050381	Dus3l	68	70.615	ENSDNOG00000048551	-	94	70.395	Dasypus_novemcinctus
ENSRNOG00000050381	Dus3l	74	92.898	ENSDORG00000006754	Dus3l	90	92.898	Dipodomys_ordii
ENSRNOG00000050381	Dus3l	85	47.197	FBgn0032819	CG10463	94	46.435	Drosophila_melanogaster
ENSRNOG00000050381	Dus3l	55	84.483	ENSETEG00000004749	-	57	84.483	Echinops_telfairi
ENSRNOG00000050381	Dus3l	86	60.854	ENSEBUG00000010532	dus3l	78	60.854	Eptatretus_burgeri
ENSRNOG00000050381	Dus3l	68	68.973	ENSEASG00005023094	-	100	87.500	Equus_asinus_asinus
ENSRNOG00000050381	Dus3l	100	77.177	ENSECAG00000019359	-	100	77.177	Equus_caballus
ENSRNOG00000050381	Dus3l	97	59.938	ENSELUG00000015033	dus3l	97	60.250	Esox_lucius
ENSRNOG00000050381	Dus3l	97	79.809	ENSFCAG00000027534	-	100	90.756	Felis_catus
ENSRNOG00000050381	Dus3l	96	62.946	ENSFALG00000001343	-	99	63.095	Ficedula_albicollis
ENSRNOG00000050381	Dus3l	98	64.094	ENSFDAG00000014182	DUS3L	100	68.210	Fukomys_damarensis
ENSRNOG00000050381	Dus3l	99	59.231	ENSFHEG00000010091	dus3l	98	60.220	Fundulus_heteroclitus
ENSRNOG00000050381	Dus3l	59	75.462	ENSGMOG00000011366	dus3l	98	75.462	Gadus_morhua
ENSRNOG00000050381	Dus3l	96	62.592	ENSGALG00000001800	-	99	63.181	Gallus_gallus
ENSRNOG00000050381	Dus3l	96	60.945	ENSGAFG00000008857	dus3l	97	60.945	Gambusia_affinis
ENSRNOG00000050381	Dus3l	96	59.904	ENSGACG00000004109	dus3l	100	60.518	Gasterosteus_aculeatus
ENSRNOG00000050381	Dus3l	96	65.391	ENSGAGG00000005527	-	99	65.391	Gopherus_agassizii
ENSRNOG00000050381	Dus3l	100	75.994	ENSGGOG00000027433	DUS3L	100	81.793	Gorilla_gorilla
ENSRNOG00000050381	Dus3l	99	59.685	ENSHBUG00000022232	dus3l	97	60.616	Haplochromis_burtoni
ENSRNOG00000050381	Dus3l	100	80.858	ENSHGLG00000013475	DUS3L	100	80.858	Heterocephalus_glaber_female
ENSRNOG00000050381	Dus3l	100	81.011	ENSHGLG00100007077	DUS3L	100	81.011	Heterocephalus_glaber_male
ENSRNOG00000050381	Dus3l	97	59.748	ENSHCOG00000016072	dus3l	98	59.874	Hippocampus_comes
ENSRNOG00000050381	Dus3l	98	62.328	ENSIPUG00000004025	dus3l	97	63.166	Ictalurus_punctatus
ENSRNOG00000050381	Dus3l	100	79.786	ENSSTOG00000025017	DUS3L	100	80.155	Ictidomys_tridecemlineatus
ENSRNOG00000050381	Dus3l	100	81.620	ENSJJAG00000023742	Dus3l	100	82.271	Jaculus_jaculus
ENSRNOG00000050381	Dus3l	99	59.846	ENSKMAG00000009675	dus3l	97	60.856	Kryptolebias_marmoratus
ENSRNOG00000050381	Dus3l	95	58.306	ENSLBEG00000015795	dus3l	95	58.306	Labrus_bergylta
ENSRNOG00000050381	Dus3l	97	59.357	ENSLACG00000001204	dus3l	97	59.357	Latimeria_chalumnae
ENSRNOG00000050381	Dus3l	98	58.285	ENSLOCG00000010531	dus3l	97	58.651	Lepisosteus_oculatus
ENSRNOG00000050381	Dus3l	98	75.767	ENSLAFG00000027552	-	100	76.480	Loxodonta_africana
ENSRNOG00000050381	Dus3l	100	82.110	ENSMFAG00000031910	DUS3L	100	84.962	Macaca_fascicularis
ENSRNOG00000050381	Dus3l	65	92.157	ENSMMUG00000031027	DUS3L	100	84.712	Macaca_mulatta
ENSRNOG00000050381	Dus3l	84	92.070	ENSMNEG00000036509	DUS3L	100	92.070	Macaca_nemestrina
ENSRNOG00000050381	Dus3l	100	81.957	ENSMLEG00000043222	DUS3L	100	84.712	Mandrillus_leucophaeus
ENSRNOG00000050381	Dus3l	96	60.766	ENSMAMG00000015637	dus3l	97	61.173	Mastacembelus_armatus
ENSRNOG00000050381	Dus3l	99	59.528	ENSMZEG00005026661	dus3l	97	60.454	Maylandia_zebra
ENSRNOG00000050381	Dus3l	96	66.457	ENSMGAG00000001547	-	100	66.457	Meleagris_gallopavo
ENSRNOG00000050381	Dus3l	97	90.468	ENSMAUG00000008347	Dus3l	100	90.172	Mesocricetus_auratus
ENSRNOG00000050381	Dus3l	97	81.051	ENSMICG00000007097	DUS3L	96	80.952	Microcebus_murinus
ENSRNOG00000050381	Dus3l	99	90.738	ENSMOCG00000021796	Dus3l	100	90.248	Microtus_ochrogaster
ENSRNOG00000050381	Dus3l	97	60.787	ENSMMOG00000018377	dus3l	97	60.883	Mola_mola
ENSRNOG00000050381	Dus3l	99	65.029	ENSMODG00000001339	-	93	66.071	Monodelphis_domestica
ENSRNOG00000050381	Dus3l	95	59.355	ENSMALG00000007559	dus3l	95	59.355	Monopterus_albus
ENSRNOG00000050381	Dus3l	99	94.505	MGP_CAROLIEiJ_G0021789	Dus3l	100	94.505	Mus_caroli
ENSRNOG00000050381	Dus3l	99	94.192	ENSMUSG00000007603	Dus3l	100	94.192	Mus_musculus
ENSRNOG00000050381	Dus3l	99	93.407	MGP_PahariEiJ_G0020778	Dus3l	100	93.407	Mus_pahari
ENSRNOG00000050381	Dus3l	99	94.192	MGP_SPRETEiJ_G0022700	Dus3l	100	94.192	Mus_spretus
ENSRNOG00000050381	Dus3l	97	78.889	ENSMPUG00000006188	-	97	78.797	Mustela_putorius_furo
ENSRNOG00000050381	Dus3l	97	78.989	ENSMLUG00000007159	-	100	78.746	Myotis_lucifugus
ENSRNOG00000050381	Dus3l	99	84.006	ENSNGAG00000017157	Dus3l	100	84.006	Nannospalax_galili
ENSRNOG00000050381	Dus3l	99	53.941	ENSNBRG00000015011	dus3l	96	54.705	Neolamprologus_brichardi
ENSRNOG00000050381	Dus3l	97	82.325	ENSNLEG00000013734	DUS3L	100	84.712	Nomascus_leucogenys
ENSRNOG00000050381	Dus3l	77	75.202	ENSMEUG00000014401	-	100	75.202	Notamacropus_eugenii
ENSRNOG00000050381	Dus3l	78	87.054	ENSOPRG00000000954	DUS3L	81	87.054	Ochotona_princeps
ENSRNOG00000050381	Dus3l	100	80.218	ENSODEG00000015771	DUS3L	100	80.218	Octodon_degus
ENSRNOG00000050381	Dus3l	97	60.193	ENSONIG00000019793	dus3l	97	60.616	Oreochromis_niloticus
ENSRNOG00000050381	Dus3l	97	64.330	ENSOANG00000004386	-	96	64.330	Ornithorhynchus_anatinus
ENSRNOG00000050381	Dus3l	98	60.188	ENSORLG00000030245	dus3l	95	60.601	Oryzias_latipes
ENSRNOG00000050381	Dus3l	97	61.022	ENSOMEG00000023500	dus3l	96	61.218	Oryzias_melastigma
ENSRNOG00000050381	Dus3l	100	76.110	ENSOGAG00000016549	DUS3L	96	76.948	Otolemur_garnettii
ENSRNOG00000050381	Dus3l	90	73.142	ENSOARG00000007052	-	99	73.142	Ovis_aries
ENSRNOG00000050381	Dus3l	97	81.933	ENSPPAG00000038054	DUS3L	100	84.211	Pan_paniscus
ENSRNOG00000050381	Dus3l	97	79.650	ENSPPRG00000000633	-	100	90.196	Panthera_pardus
ENSRNOG00000050381	Dus3l	97	81.775	ENSPTRG00000010343	DUS3L	100	83.960	Pan_troglodytes
ENSRNOG00000050381	Dus3l	100	69.492	ENSPANG00000015039	DUS3L	100	77.444	Papio_anubis
ENSRNOG00000050381	Dus3l	95	63.607	ENSPKIG00000018035	dus3l	96	63.607	Paramormyrops_kingsleyae
ENSRNOG00000050381	Dus3l	86	68.439	ENSPSIG00000004965	-	97	67.785	Pelodiscus_sinensis
ENSRNOG00000050381	Dus3l	96	59.711	ENSPMGG00000021422	dus3l	93	59.711	Periophthalmus_magnuspinnatus
ENSRNOG00000050381	Dus3l	99	88.679	ENSPEMG00000020784	Dus3l	100	88.768	Peromyscus_maniculatus_bairdii
ENSRNOG00000050381	Dus3l	97	61.685	ENSPMAG00000007671	dus3l	97	61.722	Petromyzon_marinus
ENSRNOG00000050381	Dus3l	53	86.905	ENSPCIG00000008483	-	96	86.905	Phascolarctos_cinereus
ENSRNOG00000050381	Dus3l	99	59.568	ENSPFOG00000006750	dus3l	97	61.014	Poecilia_formosa
ENSRNOG00000050381	Dus3l	99	60.031	ENSPLAG00000011636	dus3l	97	61.502	Poecilia_latipinna
ENSRNOG00000050381	Dus3l	97	59.652	ENSPMEG00000011343	dus3l	94	60.778	Poecilia_mexicana
ENSRNOG00000050381	Dus3l	96	61.199	ENSPREG00000012315	dus3l	97	61.199	Poecilia_reticulata
ENSRNOG00000050381	Dus3l	100	78.746	ENSPPYG00000009435	DUS3L	100	78.746	Pongo_abelii
ENSRNOG00000050381	Dus3l	53	71.364	ENSPCAG00000005233	-	67	71.364	Procavia_capensis
ENSRNOG00000050381	Dus3l	97	82.325	ENSPCOG00000026203	DUS3L	96	82.222	Propithecus_coquereli
ENSRNOG00000050381	Dus3l	77	92.982	ENSPVAG00000010503	-	77	92.982	Pteropus_vampyrus
ENSRNOG00000050381	Dus3l	99	60.157	ENSPNYG00000009052	dus3l	97	61.102	Pundamilia_nyererei
ENSRNOG00000050381	Dus3l	98	63.262	ENSPNAG00000022347	dus3l	97	63.764	Pygocentrus_nattereri
ENSRNOG00000050381	Dus3l	100	71.407	ENSRBIG00000025322	DUS3L	100	71.407	Rhinopithecus_bieti
ENSRNOG00000050381	Dus3l	100	82.110	ENSRROG00000037008	DUS3L	100	84.962	Rhinopithecus_roxellana
ENSRNOG00000050381	Dus3l	85	37.607	YLR401C	-	88	38.200	Saccharomyces_cerevisiae
ENSRNOG00000050381	Dus3l	100	79.367	ENSSBOG00000020402	DUS3L	88	91.597	Saimiri_boliviensis_boliviensis
ENSRNOG00000050381	Dus3l	98	67.913	ENSSHAG00000014156	-	97	68.297	Sarcophilus_harrisii
ENSRNOG00000050381	Dus3l	97	60.787	ENSSFOG00015008797	dus3l	96	61.014	Scleropages_formosus
ENSRNOG00000050381	Dus3l	99	58.511	ENSSMAG00000004896	dus3l	98	59.581	Scophthalmus_maximus
ENSRNOG00000050381	Dus3l	99	60.555	ENSSDUG00000013517	dus3l	99	61.254	Seriola_dumerili
ENSRNOG00000050381	Dus3l	99	60.465	ENSSLDG00000016115	dus3l	98	61.490	Seriola_lalandi_dorsalis
ENSRNOG00000050381	Dus3l	52	82.121	ENSSPUG00000011128	-	94	82.121	Sphenodon_punctatus
ENSRNOG00000050381	Dus3l	99	56.589	ENSSPAG00000018660	dus3l	97	59.150	Stegastes_partitus
ENSRNOG00000050381	Dus3l	97	81.429	ENSSSCG00000040968	-	96	81.429	Sus_scrofa
ENSRNOG00000050381	Dus3l	52	68.580	ENSTGUG00000014885	-	100	68.580	Taeniopygia_guttata
ENSRNOG00000050381	Dus3l	96	67.197	ENSTGUG00000001021	-	100	67.197	Taeniopygia_guttata
ENSRNOG00000050381	Dus3l	98	58.295	ENSTRUG00000013055	dus3l	98	58.438	Takifugu_rubripes
ENSRNOG00000050381	Dus3l	98	59.875	ENSTNIG00000017537	dus3l	99	60.159	Tetraodon_nigroviridis
ENSRNOG00000050381	Dus3l	63	91.519	ENSTTRG00000013600	-	67	91.519	Tursiops_truncatus
ENSRNOG00000050381	Dus3l	97	80.604	ENSUAMG00000024269	-	100	83.303	Ursus_americanus
ENSRNOG00000050381	Dus3l	97	74.295	ENSUMAG00000010831	-	100	74.281	Ursus_maritimus
ENSRNOG00000050381	Dus3l	97	80.411	ENSVVUG00000013781	-	100	79.878	Vulpes_vulpes
ENSRNOG00000050381	Dus3l	100	64.625	ENSXETG00000027405	dus3l	97	66.086	Xenopus_tropicalis
ENSRNOG00000050381	Dus3l	58	77.212	ENSXCOG00000019852	dus3l	89	77.212	Xiphophorus_couchianus
ENSRNOG00000050381	Dus3l	99	58.779	ENSXMAG00000015252	dus3l	96	60.095	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002943	tRNA dihydrouridine synthesis	-	IEA	Process
GO:0017150	tRNA dihydrouridine synthase activity	21873635.	IBA	Function
GO:0017150	tRNA dihydrouridine synthase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0050660	flavin adenine dinucleotide binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process