EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000050670 (Gene tree)
Gene ID: -
Gene Symbol: AABR07049326.1
Alias: ECAT11
Full Name: LINE-1 type transposase domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5861 bases
Position: chr5:117354794-117360654
Accession: 685355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000064049	Transposase_22	PF02994.14	5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000074042	AABR07049326.1-201	2403	XM_001063462	ENSRNOP00000064049	800 (aa)	XP_001063462	M0R3X5

Gene Model

Click here to download ENSRNOG00000050670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000050670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000050670	AABR07049326.1	99	44.380	ENSAMEG00000014821	L1TD1	99	45.539	Ailuropoda_melanoleuca
ENSRNOG00000050670	AABR07049326.1	79	56.338	ENSCJAG00000038509	L1TD1	98	56.338	Callithrix_jacchus
ENSRNOG00000050670	AABR07049326.1	65	43.272	ENSCATG00000038295	L1TD1	99	46.296	Cercocebus_atys
ENSRNOG00000050670	AABR07049326.1	83	48.624	ENSCLAG00000005428	-	99	37.599	Chinchilla_lanigera
ENSRNOG00000050670	AABR07049326.1	99	70.610	ENSCGRG00001024238	L1td1	99	70.610	Cricetulus_griseus_chok1gshd
ENSRNOG00000050670	AABR07049326.1	99	70.610	ENSCGRG00000011853	L1td1	99	70.610	Cricetulus_griseus_crigri
ENSRNOG00000050670	AABR07049326.1	76	42.370	ENSDNOG00000040097	-	77	41.977	Dasypus_novemcinctus
ENSRNOG00000050670	AABR07049326.1	99	38.908	ENSDNOG00000039645	-	88	45.741	Dasypus_novemcinctus
ENSRNOG00000050670	AABR07049326.1	99	43.298	ENSEASG00005008811	L1TD1	99	42.721	Equus_asinus_asinus
ENSRNOG00000050670	AABR07049326.1	99	43.636	ENSECAG00000013248	L1TD1	99	42.822	Equus_caballus
ENSRNOG00000050670	AABR07049326.1	99	73.134	ENSMAUG00000020769	L1td1	99	73.259	Mesocricetus_auratus
ENSRNOG00000050670	AABR07049326.1	51	82.921	ENSMOCG00000007037	L1td1	99	65.842	Microtus_ochrogaster
ENSRNOG00000050670	AABR07049326.1	99	78.027	ENSMUSG00000087166	L1td1	99	80.524	Mus_musculus
ENSRNOG00000050670	AABR07049326.1	58	80.463	MGP_PahariEiJ_G0028522	L1td1	100	71.890	Mus_pahari
ENSRNOG00000050670	AABR07049326.1	99	77.278	MGP_SPRETEiJ_G0027153	L1td1	99	78.901	Mus_spretus
ENSRNOG00000050670	AABR07049326.1	89	54.933	ENSNGAG00000000776	L1td1	95	55.935	Nannospalax_galili
ENSRNOG00000050670	AABR07049326.1	99	70.324	ENSPEMG00000008068	L1td1	99	70.823	Peromyscus_maniculatus_bairdii
ENSRNOG00000050670	AABR07049326.1	99	45.274	ENSRBIG00000005782	L1TD1	99	46.387	Rhinopithecus_bieti
ENSRNOG00000050670	AABR07049326.1	99	45.249	ENSUAMG00000002306	L1TD1	99	46.786	Ursus_americanus
ENSRNOG00000050670	AABR07049326.1	88	58.713	ENSUMAG00000014924	L1TD1	99	45.642	Ursus_maritimus